BAC Information

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BAC

Clone NameB6Ng01-070O08
Chromosome4 (Build37)
Map Location 58,947,875 - 59,091,362
singlet/doubletdoublet
Overlap geneLOC100041581, Ltb4dh, 2010203O07Rik, Gng10, AI481877
Upstream geneTxn1, Txndc8, Svep1, Musk, Edg2, LOC675306, LOC433711, Olfr267, AI314180
Downstream geneLOC433712, Ugcg, LOC100041535, LOC634731, LOC666719, Rod1, Hsdl2, E130308A19Rik, LOC100041592, 1110054O05Rik, Snx30, Slc46a2, LOC100041656, Mup4, LOC620807, LOC100041658
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070O08.bB6Ng01-070O08.g
ACCDH888750DH888751
length1,0921,130
definitionDH888750|Mus musculus domesticus DNA, BAC clone: B6Ng01-070O08, 5' end.DH888751|Mus musculus domesticus DNA, BAC clone: B6Ng01-070O08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,090,268 - 59,091,362)(58,947,875 - 58,949,041)
sequence
gaattccttcattgcctggcaactgaacttctagtattaagaaaaagaga
tgtggggctggagagatggctcagtggttaagagtgctagccactcttcc
agagaacctgggttcaattcccagcacctatatggctgctcaaaacagta
actccagttgcaggggatgtgacaccctcacacagacatacttacaggca
aaacaccaatgcacatgaaataaaaataaataattttttaaaaagaaaac
gtgtattttttatttaaaacaaaagagaagcctcaaatatcttgtgttct
aacatttctccttacaaaaaggcttgggaagaatttagggctaaataaat
gctgcctcaaacaggcaagataaaacataaatcattgcataaaaacatct
cccaagtctatctgctttctgaaccaactgggagatgaaagcaggagtct
catttaagaaggcctgtcctgttctgcattatatagccatcatcagaagc
aattcatttggggatcaaatagactgacagaaaggacaagcagggaatta
ccactgtcagcagctcaaagccaggactgcttcccagtgctggcactgat
attgggtctagtcagtgctctgtctattattcttctctcctctgccagct
actgtgcatcatgactactaaaaaaggaactgaattaatctagtcaaaac
aaaataaaattacttatatattttccacactctcatagtatatatatata
tatatatatatatatatatatatatatatatcaaactggggattgaattt
acactagagcataaagcagtatatttaagcgttctatcactaaacatcat
ccacaacccagaaaactttctcattaaggagatggggaacatcattcatg
gcacaggacaccttttgtaattttgacaaaatgtaaattacttaactttc
atatggctataatagcttacttaagaagacatactgaaggatgaaactgc
atattgagtgaaccagattttcaagtcatttgcagattatctgtgtggat
atgggggtataagattgggtcaactatttataattgactttt
gaattcccacagtgggacgcacagaagattctcctttgaggcgtctgtgc
ccatcaagacgtttgagacaatcactgtgaagataagcagagtggaattg
ttcagcgtggcccaaagctgccaaattaactctggcccaaaagagctctt
caaactctttctactggtcctagtgaatgcactggagcctaacttgatgt
gcaaacagattgcaccactctggcaaggagtagctgagtctcagccaatc
accagcagtgaacgaggccaaccttgtttgtagatagatacaagctgtaa
ccagcaggggctgtctgtatctcactccctttcctttggctacagacaca
acctgcctgggtggtgagctagggcgtttttgaactatttcagcaccagc
ttttcctcattttacaaatgccgaatgaacagttgacctctgcaaagcga
gcttgcctttttctttgtttcttcctttcttctttgtctgtcttgtgttt
cctaacctacagctctggaaatactgctttagaagattctcatgcctaga
taatgtagtccagctacctttatagttcctgggtgttaggatcctgcttt
gggctctcagtcagatttgtatagctgttttctacacacacacacacaca
cacacacacacacacactgtttttaatttcagagagagaaaggtcttgaa
atatagcccagggctaaaccctaagtttcttcctcaacttgggggaaaaa
aatcctcccaaaatgatgatatacctaagtaaatcgaccattttattttt
tgatgctcttttaccaagaaaaagcctttctagaatttactgccaagaaa
aatttgaatctcagaaaatctcggtggctgcttttatgagacagtaagaa
tggagtagtctatagtggttctttttaccttcactttgttgagatccagt
gtgatccattgctttgtcgtcagttatgcacacacggggagcttgtgagt
ctttgagaagcaggaagcagacaaagaaagcactatttcagcagctatgg
caattccgatgattacgagagagagatcgttacaagtcagagaagtcaga
acgctagacagacttcgacagagcctattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_59090268_59091362
seq2: B6Ng01-070O08.b_45_1136 (reverse)

seq1  AAAAGTCATTTTATAATAGTTGACCCATACTTTATACACACATAT-CACA  49
      |||||||| ||   ||||||||||||| |  |||||| | ||||| ||||
seq2  AAAAGTCAATTATAAATAGTTGACCCA-ATCTTATACCCCCATATCCACA  49

seq1  CAGATAATTCTGC-AATGACTTTGAAATCTAGTTCAACTCAATTATGCAG  98
      ||||||| ||||| ||||||||  |||||| |||| |||||| |||||||
seq2  CAGATAA-TCTGCAAATGACTTGAAAATCTGGTTC-ACTCAA-TATGCAG  96

seq1  TTTCATCCTTCAGTATGTCTTCTTAAGTAAGCTTATTTATAG-CATATGA  147
      |||||||||||||||||||||||||||||||||   |||||| |||||||
seq2  TTTCATCCTTCAGTATGTCTTCTTAAGTAAGCT--ATTATAGCCATATGA  144

seq1  AAGTTAAGTAATTTACATTTTGTACAAAATTACAAAAGGTGTCCTGTGCC  197
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAGTTAAGTAATTTACATTTTGT-CAAAATTACAAAAGGTGTCCTGTGCC  193

seq1  ATGAATGATGTT-CCCATCTCCTTAATGAGAAAGTTTTCTGGGTTGTGGA  246
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATGAATGATGTTCCCCATCTCCTTAATGAGAAAGTTTTCTGGGTTGTGGA  243

seq1  TGATGTTTAGTGATAGAACGCTTAAATATACTGCTTTATGCTCTAGTGTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTTAGTGATAGAACGCTTAAATATACTGCTTTATGCTCTAGTGTA  293

seq1  AATTCAATCCCCAGTTTGATATATATATATATATATATATATATATATAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAATCCCCAGTTTGATATATATATATATATATATATATATATATAT  343

seq1  ATATATATATACTATGAGAGTGTGGAAAATATATAAGTAATTTTATTTTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATACTATGAGAGTGTGGAAAATATATAAGTAATTTTATTTTG  393

seq1  TTTTGACTAGATTAATTCAGTTCCTTTTTTAGTAGTCATGATGCACAGTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACTAGATTAATTCAGTTCCTTTTTTAGTAGTCATGATGCACAGTA  443

seq1  GCTGGCAGAGGAGAGAAGAATAATAGACAGAGCACTGACTAGACCCAATA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCAGAGGAGAGAAGAATAATAGACAGAGCACTGACTAGACCCAATA  493

seq1  TCAGTGCCAGCACTGGGAAGCAGTCCTGGCTTTGAGCTGCTGACAGTGGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCCAGCACTGGGAAGCAGTCCTGGCTTTGAGCTGCTGACAGTGGT  543

seq1  AATTCCCTGCTTGTCCTTTCTGTCAGTCTATTTGATCCCCAAATGAATTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCCTGCTTGTCCTTTCTGTCAGTCTATTTGATCCCCAAATGAATTG  593

seq1  CTTCTGATGATGGCTATATAATGCAGAACAGGACAGGCCTTCTTAAATGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATGATGGCTATATAATGCAGAACAGGACAGGCCTTCTTAAATGA  643

seq1  GACTCCTGCTTTCATCTCCCAGTTGGTTCAGAAAGCAGATAGACTTGGGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCTGCTTTCATCTCCCAGTTGGTTCAGAAAGCAGATAGACTTGGGA  693

seq1  GATGTTTTTATGCAATGATTTATGTTTTATCTTGCCTGTTTGAGGCAGCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTTTATGCAATGATTTATGTTTTATCTTGCCTGTTTGAGGCAGCA  743

seq1  TTTATTTAGCCCTAAATTCTTCCCAAGCCTTTTTGTAAGGAGAAATGTTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAGCCCTAAATTCTTCCCAAGCCTTTTTGTAAGGAGAAATGTTA  793

seq1  GAACACAAGATATTTGAGGCTTCTCTTTTGTTTTAAATAAAAAATACACG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACAAGATATTTGAGGCTTCTCTTTTGTTTTAAATAAAAAATACACG  843

seq1  TTTTCTTTTTAAAAAATTATTTATTTTTATTTCATGTGCATTGGTGTTTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTTAAAAAATTATTTATTTTTATTTCATGTGCATTGGTGTTTT  893

seq1  GCCTGTAAGTATGTCTGTGTGAGGGTGTCACATCCCCTGCAACTGGAGTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTAAGTATGTCTGTGTGAGGGTGTCACATCCCCTGCAACTGGAGTT  943

seq1  ACTGTTTTGAGCAGCCATATAGGTGCTGGGAATTGAACCCAGGTTCTCTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTTGAGCAGCCATATAGGTGCTGGGAATTGAACCCAGGTTCTCTG  993

seq1  GAAGAGTGGCTAGCACTCTTAACCACTGAGCCATCTCTCCAGCCCCACAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTGGCTAGCACTCTTAACCACTGAGCCATCTCTCCAGCCCCACAT  1043

seq1  CTCTTTTTCTTAATACTAGAAGTTCAGTTGCCAGGCAATGAAGGAATTC  1095
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTTCTTAATACTAGAAGTTCAGTTGCCAGGCAATGAAGGAATTC  1092

seq1: chr4_58947875_58949041
seq2: B6Ng01-070O08.g_66_1195

seq1  GAATTCCCACAGTGGGACGCACAGAAGATTCTCCTTTGAGGCGTCTGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACAGTGGGACGCACAGAAGATTCTCCTTTGAGGCGTCTGTGC  50

seq1  CCATCAAGACGTTTGAGACAATCACTGTGAAGATAAGCAGAGTGGAATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAAGACGTTTGAGACAATCACTGTGAAGATAAGCAGAGTGGAATTG  100

seq1  TTCAGCGTGGCCCAAAGCTGCCAAATTAACTCTGGCCCAAAAGAGCTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCGTGGCCCAAAGCTGCCAAATTAACTCTGGCCCAAAAGAGCTCTT  150

seq1  CAAACTCTTTCTACTGGTCCTAGTGAATGCACTGGAGCCTAACTTGATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCTTTCTACTGGTCCTAGTGAATGCACTGGAGCCTAACTTGATGT  200

seq1  GCAAACAGATTGCACCACTCTGGCAAGGAGTAGCTGAGTCTCAGCCAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACAGATTGCACCACTCTGGCAAGGAGTAGCTGAGTCTCAGCCAATC  250

seq1  ACCAGCAGTGAACGAGGCCAACCTTGTTTGTAGATAGATACAAGCTGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCAGTGAACGAGGCCAACCTTGTTTGTAGATAGATACAAGCTGTAA  300

seq1  CCAGCAGGGGCTGTCTGTATCTCACTCCCTTTCCTTTGGCTACAGACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGGGGCTGTCTGTATCTCACTCCCTTTCCTTTGGCTACAGACACA  350

seq1  ACCTGCCTGGGTGGTGAGCTAGGGCGTTTTTGAACTATTTCAGCACCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCTGGGTGGTGAGCTAGGGCGTTTTTGAACTATTTCAGCACCAGC  400

seq1  TTTTCCTCATTTTACAAATGCCGAATGAACAGTTGACCTCTGCAAAGCGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTCATTTTACAAATGCCGAATGAACAGTTGACCTCTGCAAAGCGA  450

seq1  GCTTGCCTTTTTCTTTGTTTCTTCCTTTCTTCTTTGTCTGTCTTGTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCCTTTTTCTTTGTTTCTTCCTTTCTTCTTTGTCTGTCTTGTGTTT  500

seq1  CCTAACCTACAGCTCTGGAAATACTGCTTTAGAAGATTCTCATGCCTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACCTACAGCTCTGGAAATACTGCTTTAGAAGATTCTCATGCCTAGA  550

seq1  TAATGTAGTCCAGCTACCTTTATAGTTCCTGGGTGTTAGGATCCTGCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTAGTCCAGCTACCTTTATAGTTCCTGGGTGTTAGGATCCTGCTTT  600

seq1  GGGCTCTCAGTCAGATTTGTATAGCTGTTTTCTACACACACACACACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCTCAGTCAGATTTGTATAGCTGTTTTCTACACACACACACACACA  650

seq1  CACACACACACACACACTGTTTTTAATTTCAGAGAGAGAAAGGTCTTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACTGTTTTTAATTTCAGAGAGAGAAAGGTCTTGAA  700

seq1  ATATAGCCCAGGGCTAAACCCTAAGTTTCTTCCTCAACTTGGGGGAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATATAGCCCAGGGCTAAACCCTAAGTTTCTTCCTCAACTTGGGGG-AAAA  749

seq1  AAATCCTCCCAAAATGATGATATACCTAAGTAAATCGACCATTTTATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTCCCAAAATGATGATATACCTAAGTAAATCGACCATTTTATTTT  799

seq1  TTGATGCTCTTTTACCAAGAAAAAGCCTTTCTAGAATTTACTGCCAAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGCTCTTTTACCAAGAAAAAGCCTTTCTAGAATTTACTGCCAAGAA  849

seq1  AAATTTGAATCTCAGGAAAATCTCGGTGGCTGCTTTTATGAGACAGTAAG  900
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAATTTGAATCTCA-GAAAATCTCGGTGGCTGCTTTTATGAGACAGTAAG  898

seq1  AATGGAGTAGTCTATTAGTGGTTCTTTTTTACCTTCACTTTGTTGAGATC  950
      |||||||||||||| ||||||||| |||||||||||||||||||||||||
seq2  AATGGAGTAGTCTA-TAGTGGTTC-TTTTTACCTTCACTTTGTTGAGATC  946

seq1  CAGTGTGATCCATTGCTTTGTCGTCAGTTTATGCACACACCGGGGAGCTT  1000
      ||||||||||||||||||||||||||| ||||||||||| ||||||||||
seq2  CAGTGTGATCCATTGCTTTGTCGTCAG-TTATGCACACA-CGGGGAGCTT  994

seq1  GTGAGTCTTTGAGGAAGGCAGGAAAGCAAGGACAAAGAAAAGCAACTATT  1050
      |||||||||||||  | ||||| |||||  ||||||| ||||| ||||||
seq2  GTGAGTCTTTGAG--AAGCAGG-AAGCA--GACAAAG-AAAGC-ACTATT  1037

seq1  TCAGCAGCTATGGCAACATTCCAGATGGAAATAACAGAGAGAGAGAGATC  1100
      |||||||||||||||  ||||| ||||   || ||   ||||||||||||
seq2  TCAGCAGCTATGGCA--ATTCC-GATG---ATTAC---GAGAGAGAGATC  1078

seq1  AGTTACAAAGTCAAGAGACAGTTCAAAGACAGCTAGGACAAGGACATTCA  1150
       ||||| ||||| ||||| |||    |||  |||| ||||  ||| ||| 
seq2  -GTTAC-AAGTC-AGAGA-AGT---CAGAACGCTA-GACA--GAC-TTC-  1116

seq1  GGAACAAGAGCCTATTC  1167
       ||   |||||||||||
seq2  -GA--CAGAGCCTATTC  1130