BAC Information

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BAC

Clone NameB6Ng01-070P12
Chromosome4 (Build37)
Map Location 89,734,556 - 89,735,538
singlet/doubletsinglet
Overlap genenone
Upstream geneMtap, LOC625574, Cdkn2a, Cdkn2b, LOC664785, Dmrta1
Downstream geneZfp352, LOC619842, LOC435792, Ppia-ps4_804.1, LOC664840
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070P12.bB6Ng01-070P12.g
ACCDH888804DH888805
length1,2311,114
definitionDH888804|Mus musculus domesticus DNA, BAC clone: B6Ng01-070P12, 5' end.DH888805|Mus musculus domesticus DNA, BAC clone: B6Ng01-070P12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgggaattttgatgacaagtatgtggtattttgattaagaat
acattgaatctgtaatttgcttctgaaagaatggccatagtcacatttaa
atcctactgttccttgatcatgggagatcttttcatttcctgatatattc
tttagtttctttcttcagtgtattaaagtttttattatgcaagtctttca
cctgtttggctagaattatcttgaaatattttcatgagtgatgctggaat
ttgtcaaaagcctttttttcatttaatgaaataactgtgtctttttttat
gtcactgtactatttatcttgtgggttatgtttattgatttacatatttt
gaaccataattgtgtctctggaataaagtcatagtagataatctctttta
ttttcagtatgttcttcaaattggtttgcaggtatttcaaatgagaattt
tgcatctatgttcaaaggaatagtggtctataaattttttacttgagtca
ttgtgtaggcttctttaaaatcaggtaatagtggtttcataaaaataact
agaaaatgtttcttaagtttccatttttaagaaaaactttaggagtactg
gtttcaggtttttttttttcttttttttttgaaggtctggtagaattttg
tcctggatttcactggccattggcatcttcttggttttaagagtctaatt
ttctttctatttcactagaagttatgggtttgatcattttgtttatatca
tcttaatttaactttggtaagttgtatacaataagaaattaatccttttt
attaaaaacaaccctcctgtttggggaagactttttaaagcacttcttta
ccagtcggagtttccttgagatctattgtaatgtctcccttttcatctct
aatttattaacttgtatattctttatcaatatgttaatattgagaataag
ttaatctagataaaggtctataatcttgttgattttctaaaagacccgat
tcttcattttattgatctttgtatgttatgtatttgtgggtattaatttt
ctgtttctgtttcagttatttcatcctgaattttattcatccattaactc
tatttggtatatctctgtcctaagctttccagttcataggtttaacaggg
attctagtacttagttggttgtatattgccttaggtcaaggctggatgtg
gcgaattgcctctctctttccatttttagag
gaattctttgtttagctatgtaccccatttttaatggtattatttgatat
tctggagtccagcttcttgagttctttgtatatattggataatagtcccc
tatctgatttaggattggtaaagatcctttcccaatctattggtggtctt
tttgtcttattgacagtgtcttttgccttactgaagctttgcaattttat
caggtaccattagtcgattctcgatcttacagcacacgccatcatgtttc
ccctgtgcccatatgtttgaggctttttcccattttctcctctataagtt
tttgtgtatctggttttatatggggttccttgattggggcagatagctta
atctttaaaattctcataccatggaactataaagacctgagtatagaacc
ctagagcacacacacacacacacacacacacacaatccatcttcaatgac
acatgtgtgtaatcccagcaattgggatgaagaaataagattcctagagt
ttactagaggacattcattcaagaaaaattgttgatttccacatttagta
gggcactgtctcaggaaaagtaagatagaaactcattgtcgaagctacct
gacctctgcatcaaactctaccctccacactcacagcaacactcacccca
caccccctacacatttatacccacaggtatttgtgagcacataagcatgt
acacagacacacatatacacacaggtgcaaatgcactgatatcattacca
gactgacagtcttaacaatagagaataaaattccttcctttaaatagtag
cttcacacacaatgtttcaaacagtgacatttttaattactaggtatcca
tgcacattaatattcatgtgcacaaagtattcaagtcaatggaaatatct
ttagaagtttagctgtttaaagagaattattatccttttaaaaagcattt
ttttagagtatatttatttctacatgtacagttgttttgcgtatgatgtg
tgtacacatgtgtgcctgtgcatgcagataaagacagtttcagatccctg
actagttttataagcatgttgtgggtgtgacccagtctttcttgaagcaa
caggttcttatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_89734556_89735538
seq2: B6Ng01-070P12.g_217_1180

seq1  TTTGTCTTATTGACAGTGTCTTTTGCCTTACTGAAGCTTTGCAATTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTATTGACAGTGTCTTTTGCCTTACTGAAGCTTTGCAATTTTAT  50

seq1  CAGGTACCATTAGTCGATTCTCGATCTTACAGCACACGCCATCATGTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTACCATTAGTCGATTCTCGATCTTACAGCACACGCCATCATGTTTC  100

seq1  CCCTGTGCCCATATGTTTGAGGCTTTTTCCCATTTTCTCCTCTATAAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGCCCATATGTTTGAGGCTTTTTCCCATTTTCTCCTCTATAAGTT  150

seq1  TTTGTGTATCTGGTTTTATATGGGGTTCCTTGATTGGGGCAGATAGCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTATCTGGTTTTATATGGGGTTCCTTGATTGGGGCAGATAGCTTA  200

seq1  ATCTTTAAAATTCTCATACCATGGAACTATAAAGACCTGAGTATAGAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTAAAATTCTCATACCATGGAACTATAAAGACCTGAGTATAGAACC  250

seq1  CTAGAGCACACACACACACACACACACACACACAATCCATCTTCAATGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGCACACACACACACACACACACACACACAATCCATCTTCAATGAC  300

seq1  ACATGTGTGTAATCCCAGCAATTGGGATGAAGAAATAAGATTCCTAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGTGTAATCCCAGCAATTGGGATGAAGAAATAAGATTCCTAGAGT  350

seq1  TTACTAGAGGACATTCATTCAAGAAAAATTGTTGATTTCCACATTTAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGAGGACATTCATTCAAGAAAAATTGTTGATTTCCACATTTAGTA  400

seq1  GGGCACTGTCTCAGGAAAAGTAAGATAGAAACTCATTGTCGAAGCTACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACTGTCTCAGGAAAAGTAAGATAGAAACTCATTGTCGAAGCTACCT  450

seq1  GACCTCTGCATCAAACTCTACCCTCCACACTCACAGCAACACTCACCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTGCATCAAACTCTACCCTCCACACTCACAGCAACACTCACCCCA  500

seq1  CACCCCCTACACATTTATACCCACAGGTATTTGTGAGCACATAAGCATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCTACACATTTATACCCACAGGTATTTGTGAGCACATAAGCATGT  550

seq1  ACACAGACACACATATACACACAGGTGCAAATGCACTGATATCATTACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGACACACATATACACACAGGTGCAAATGCACTGATATCATTACCA  600

seq1  GACTGACAGTCTTAACAATAGAGAATAAAATTCCTTCCTTTAAATAGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGACAGTCTTAACAATAGAGAATAAAATTCCTTCCTTTAAATAGTAG  650

seq1  CTTCACACACAATGTTTCAAACAGTGACATTTTTAATTACTAGGTATCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACACACAATGTTTCAAACAGTGACATTTTTAATTACTAGGTATCCA  700

seq1  TGCACATTAATATTCATGTGCACAAAGTATTCAAGTCAATGGAAATATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATTAATATTCATGTGCACAAAGTATTCAAGTCAATGGAAATATCT  750

seq1  TTAGAAGTTTAGCTGTTTAAAGAGAATTATTATCCTTTTAAAAAGCATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGTTTAGCTGTTTAAAGAGAATTATTATCCTTTTAAAAAGCATTT  800

seq1  TTTTAGAGTATATTTATTTCTACATGTACAGTTGTTTTGCCGGTATGAAT  850
      ||||||||||||||||||||||||||||||||||||||||  ||||| ||
seq2  TTTTAGAGTATATTTATTTCTACATGTACAGTTGTTTTGC--GTATG-AT  847

seq1  GTTGTGTACCACATGTGTGCCTGGTGCCAATGCAGGATAAAAGACAGTTT  900
      | |||||| ||||||||||||| ||||  ||||| ||| |||||||||||
seq2  G-TGTGTA-CACATGTGTGCCT-GTGC--ATGCA-GAT-AAAGACAGTTT  890

seq1  CAGATCCCCTGAACTAGTGTTTATAAGCCATGTTGTGGGTGTTGAACCCA  950
      ||||| ||||| |||||| |||||||| ||||||||||||||   |||||
seq2  CAGAT-CCCTG-ACTAGT-TTTATAAG-CATGTTGTGGGTGT--GACCCA  934

seq1  GGTCTTCTTGGATAGCAACAGTGTTCTTATATA  983
      |   ||||||   |||||||| |||||||||||
seq2  GTCTTTCTTG--AAGCAACAG-GTTCTTATATA  964