BAC Information

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BAC

Clone NameB6Ng01-071E04
Chromosome4 (Build37)
Map Location 146,134,381 - 146,135,585
singlet/doubletsinglet
Overlap geneOTTMUSG00000010694
Upstream geneLOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846
Downstream geneLOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071E04.bB6Ng01-071E04.g
ACCDH889010DH889011
length1,1981,258
definitionDH889010|Mus musculus domesticus DNA, BAC clone: B6Ng01-071E04, 5' end.DH889011|Mus musculus domesticus DNA, BAC clone: B6Ng01-071E04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattctgaacatggagatactattgctgaagaaagttgtcatgac
catgattgtgaggagccgcccttgcagtcaccattacaagatagtgctga
cattcggtgttctaactggtaaacaagtagtctgcgcacgtgctggggta
tttttccattccttgtgccctgcctgtcccgtggtgtcatctgggctgat
ggtgaacagccaatcagggcaaggcacgtctccaacagctcttcgtggtc
tataaaaggaccgagttttcggtgctctgggtctcctcctccccagaagc
tgatcatctatctctcgagatgcattaaagctttgctgcagaaggatccg
agtttgtcctctgtgtgtgttcttgctggcgagattcagagacacaggga
cacatgatatcagcaaatattcagtgctttttatgtatttctttgacctt
atatttctctcatgtcaaatatttctcttggcatttaacaggtatatgaa
tgatctctttcaacgccctggcctcagaagtatggattgacaatgagaaa
aagcagattatcaagtaccatggaatgtcagaaaatgaatgagaattgac
gagggaaatattgatttcctaggaacaataaacactaggccagggaataa
tcaagtgcagaaacccaggctctcagtgttccttctaacactttctcagg
aataatcaaatgctgcaccaaattcacaaatttcttctgaaaaatcccac
aaaaaatttgcccagaaaacagtgcagaacacagaaagtaggggaatatg
gtacagccatcacacaaagctgaccttacctgggtccaaaagcaaatgac
cacgaaaacatgcacacagaaaataataacagtatgggtgctacagggca
acttttaaaaagtttctctctaatagatgcagaaagtaaactcaacttga
tttcatgacagagattcaaactgcaagtacaaatcaaacaactcaaggca
taaactatgtataatcagtgggagaaagctcactgatagatatatatcaa
tatatctatgaaaggcctagggcaaaatttcacagtagatcactatgaag
cctcttgagaatggtggaacagaaggaacattactgagtctatgagataa
tagccacactcgtaaacctatcactacccacactgaagaacagctgtc
gaattcattcaggagagaaaccttacaaatgtagtgaatgcgacaaatgc
tttactgacaaaggcagtctcagagttcatcagagaattcatataggaga
gaaaccgtacaaatgcagtgagtgtgacaaatgctttacccaaccatccc
atcttagtattcatcgtagaattcattcaggagagaaaccttacaaatgt
agtgaatgcgacaaatgctttactgacaaaagcagtctgagagttcatca
gagaattcatacaggagagaaaccgtaccaatgcagtgagtgtgacaaat
gctttactgacaaaggcagtcttagagttcatcatagaattcatgcagga
gagaaaccttacaaatgtagtgaatgcgacaaatgctttactgacaaagg
ctatctgagagttcatcatagaattcatgcaggagagaaaccttacaaat
gtagtgaatgtgacaaatgctttactcacaaaggctctctgagagttcat
catagaattcattcaggagagaaaccttacaaatgtagtgaatgtgacaa
atgttttactgagaaaaacagtctgagaaggcatcagagaattcatacag
gagagaaaccttataaatgcagtgaatgtgacaaatgctttacccgaaaa
tcacatcttagtattcatcagagaattcatacaggagagaaactgtacaa
atgcagtgaatgtgacaaatgctttacccaacaatgccatcttagtattc
atcagaaaattcattcaggagagaaccttacaaatgcaatgaatgcgaca
aatgctttagtgacaaacacagtctgagaaggcatcagagaattcataca
ggagagacaccttacaaatgtaatgaatgtgacaaatgctttacctgaaa
atcacatcttagtattcatcagagaattcatacaggagagaaaccttaca
aatgtaatgaatgtgacaaatcctttactgaaaatggctgtctgagaatt
catcagagattcatacaggagagaaaccttacaaatgtatgatgtgacaa
tgctttacctgaaatccacatctagtattcatcagataattcaaacagaa
gagaaacttacaatgtagtgatgtgacaaatcctttacttgaatgcttct
gaaattcatcagagattcttataacggagaaacctacaatggtaagtgag
tgtgacaatgccttatctataaaatacaggttgagagattatctctatca
gagagata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146134381_146135585
seq2: B6Ng01-071E04.b_44_1241 (reverse)

seq1  GACAGCTG-TCTTCAGTGTGTGTAGTGATAGGTTTACGATGTTGGCTATT  49
      |||||||| ||||||||||| ||||||||||||||||||   ||||||||
seq2  GACAGCTGTTCTTCAGTGTGGGTAGTGATAGGTTTACGAGTGTGGCTATT  50

seq1  ATCCTCATTAGACTCAGTAATGTTCCTTCTGTTCCA-CATTCTTCAGAGC  98
      || |||| |||||||||||||||||||||||||||| ||||||  |||| 
seq2  AT-CTCA-TAGACTCAGTAATGTTCCTTCTGTTCCACCATTCTCAAGAGG  98

seq1  TTTCATAGTGATCCACTGTGATATTTTGCCCTAGGCCTTTCATAGATATA  148
       |||||||||||| ||||||| ||||||||||||||||||||||||||||
seq2  CTTCATAGTGATCTACTGTGAAATTTTGCCCTAGGCCTTTCATAGATATA  148

seq1  TTGATATATATCTATCAGTGAGCTTTCTCCCACTGATGATACATAGTTTA  198
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTGATATATATCTATCAGTGAGCTTTCTCCCACTGATTATACATAGTTTA  198

seq1  TGTCTTGAGTTGTTTGGTTTGTACTTGCTAAAACAGTTTTGAATCTCTGT  248
      || ||||||||||||| ||||||||||      ||| |||||||||||||
seq2  TGCCTTGAGTTGTTTGATTTGTACTTG------CAG-TTTGAATCTCTGT  241

seq1  CATGAAATCAAGTTGAGTTTACTTTCTGCATCTATTAGAGAGAAACTTTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAATCAAGTTGAGTTTACTTTCTGCATCTATTAGAGAGAAACTTTT  291

seq1  TAAAAGTTGCCCTGTAGCACCCATACTTTTATTATTTTCTGTGTGCATGT  348
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TAAAAGTTGCCCTGTAGCACCCATACTGTTATTATTTTCTGTGTGCATGT  341

seq1  TTTTGTGGTCATTTGCTTTTGGACCCAGGTAAGGTCAGCTTTGTGTGATG  398
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGTGGTCATTTGCTTTTGGACCCAGGTAAGGTCAGCTTTGTGTGATG  391

seq1  GCTGTACCATATTCCCTTACTTTCTGTGTTCTGCACTGTTTTCTGGGCAT  448
      |||||||||||||||| |||||||||||||||||||||||||||||||| 
seq2  GCTGTACCATATTCCCCTACTTTCTGTGTTCTGCACTGTTTTCTGGGCAA  441

seq1  TTTTTTTGTGGGATTTTTCAGAAGAAATTTGTGAATTTGGTGCAGCATTT  498
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTGTGGGATTTTTCAGAAGAAATTTGTGAATTTGGTGCAGCATTT  491

seq1  GATTATTCCTGAGAAAGTGTTAGAAGGAACACTGAGGGTCTGGGTTTCTG  548
      |||||||||||||||||||||||||||||||||||| | |||||||||||
seq2  GATTATTCCTGAGAAAGTGTTAGAAGGAACACTGAGAGCCTGGGTTTCTG  541

seq1  CACTTGATTATTCCCTGGCCTAGTGTTTATTGTTCCTAGGAAATCAATAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGATTATTCCCTGGCCTAGTGTTTATTGTTCCTAGGAAATCAATAT  591

seq1  TTCCCTCGTCAATTCTCATTCATTTTCTGACATTCCATGGTACTTGATAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCGTCAATTCTCATTCATTTTCTGACATTCCATGGTACTTGATAA  641

seq1  TCTGCTTTTTCTCATTGTCAATCCATACTTCTGAGGCCAGGGCGTTGAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTTTTCTCATTGTCAATCCATACTTCTGAGGCCAGGGCGTTGAAA  691

seq1  GAGATCATTCATATACCTGTTAAATGCCAAGAGAAATATCTGACATGAGA  748
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAGATCATTCATATACCTGTTAAATGCCAAGAGAAATATTTGACATGAGA  741

seq1  GAAATATAAGGTCAAAGAAATACATAAAAAGCACTGAATATTTGCTGATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATAAGGTCAAAGAAATACATAAAAAGCACTGAATATTTGCTGATA  791

seq1  TCATGTGTCCCTGTGTCTCTGAATCTTGCCGGCAAGAACACACACACAGG  848
      |||||||||||||||||||||||||| ||| ||||||||||||||| |||
seq2  TCATGTGTCCCTGTGTCTCTGAATCTCGCCAGCAAGAACACACACAGAGG  841

seq1  ACAAACTCGGATCCTTCTGCAGCAAAGCTTTAATGCATCTCGAGAGATAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTCGGATCCTTCTGCAGCAAAGCTTTAATGCATCTCGAGAGATAG  891

seq1  ATGATCAGCTTCTGGGGAGGAGGAGACCCAGAGCACCGGAAAATCGGTCC  948
      |||||||||||||||||||||||||||||||||||||| ||| |||||||
seq2  ATGATCAGCTTCTGGGGAGGAGGAGACCCAGAGCACCGAAAACTCGGTCC  941

seq1  TTTTATAGACCACGAAGAGCGGTTGGAGACGTGCCTTGCCCTGATTGGCT  998
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTTTATAGACCACGAAGAGCTGTTGGAGACGTGCCTTGCCCTGATTGGCT  991

seq1  GCTCACCATCAGCCCAGATGACGCCATGGGACAGGCAGGGCACAAGGAAT  1048
      | |||||||||||||||||||| ||| |||||||||||||||||||||||
seq2  GTTCACCATCAGCCCAGATGACACCACGGGACAGGCAGGGCACAAGGAAT  1041

seq1  GGAAAAATACCCCAGCACATGCGCAGACTACTTGTTTACCAGTTAGAACA  1098
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGAAAAATACCCCAGCACGTGCGCAGACTACTTGTTTACCAGTTAGAACA  1091

seq1  CCGAATGTCAGCACTATCTTGTAATGGTGACTGCAAGGGCGGCTCCTCAC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAATGTCAGCACTATCTTGTAATGGTGACTGCAAGGGCGGCTCCTCAC  1141

seq1  AATCATGGTCATGACAACTTTCTTCAGCAATAGTATCACCATGTTCAGAA  1198
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AATCATGGTCATGACAACTTTCTTCAGCAATAGTATCTCCATGTTCAGAA  1191

seq1  TGAATTC  1205
      |||||||
seq2  TGAATTC  1198