BAC Information

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BAC

Clone NameB6Ng01-071O08
Chromosome15 (Build37)4 (Build37)
Map Location 61,504,571 - 61,505,03578,313,311 - 78,314,437
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg, LOC100040323
Downstream geneMyc, Pvt1, LOC100040584, H2afy3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071O08.bB6Ng01-071O08.g
ACCDH889463DH889464
length4791,111
definitionDH889463|Mus musculus domesticus DNA, BAC clone: B6Ng01-071O08, 5' end.DH889464|Mus musculus domesticus DNA, BAC clone: B6Ng01-071O08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(61,504,571 - 61,505,035)(78,313,311 - 78,314,437)
sequence
gaattctgtagactgtatcttggatattctgtactttttttttttttttt
gctaatatccacttatatgtgagtacatacaatacatgtctttatgtgta
taagttacctcgctcaggatgatattttctagctccatccatttgtctgc
aaaactcaggatgtcctttttcttaatacctgagtagtattccattgtgt
aaattagccacattttctgtattcattcttctatcctgggatatctaggt
tttttccagcttctggcaatcgaaaccatggctgctgtgaacatatagtg
taacacgtgaacctgtggaattgtgggacatctttgagctatatttccaa
aagtggtattgctggggtcttcaggtagatctatttccaattttctgtgg
aacctccagattgatttccacagaggttgtaacagcttgcaatcccacca
gaaatggaggagtgttccaatttctccac
gaattcacatttaagttttcatattgattttaaacagttaaataataaat
ggccaaaatatgaagaggaaaattaacttaaaaaggaaatcactctatat
cagttggaaaaagtcagtgtcttaaagaatagcaatgtatttgtaacaat
ctcacatatttaatataaaaggaaaatatatgaggtccgtatgtgaattg
ccagctgataaataatccagctataacatattcttggtttggggagaatt
gaagaattttattaagatgtctgaattgatttttaaattaggaagcatta
aaatgaaaagagaactccttgtgatgatgttgtgagattgcaccattgct
gtgttacaaagtcacaaagtgctaaaaaaaaaaagcaatgctgtgacctt
gactgtcagccttcttccatctctgcttgcatactgctttctgggttgac
cttaagagactctatcagctctctgctgtgagctatgggcaaactgctgg
caaggcactatcaatgttccttctgaaaaatcaacagtgacagtccttcc
ctagtctttcctgtgctcattatctttgtctccgtagcaaaaattcctac
tacaaataaaacacctttccatgtttagacttttcaaccagtagagctaa
gctataggataaaaatcatgcctaagggaaatgttttgttttctgcatag
atgtatatacacaaccatatgatcatcatttaggaagactaagatggctc
agcaaattagaaagcttgctgatattcagaggtctgaaattaagttcatg
gaacccaagttagacagctcacaactgtttatgactccgccttcagagta
gtcaatgctctcttttagtctcagtgtgtatttacacacctgcatgcata
cacaaagacatttatgtacacataaataaattaatatttcattttgtttt
gcttttactactttatattgaccaaatgggtgaaattactattgcctcat
atgtacaaaagtataggatttcatccagggatgacatttatcagtgtcac
gtcctgaataaagtgtttcatccctgtcactgtcagctgctatagcttct
atggtaagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_61504571_61505035
seq2: B6Ng01-071O08.b_253_524 (reverse)

seq1  GTGGAGAAAGAGGAACACTCCTCCATTGCTGGTGGGATTGCAAGCTGGGA  50
      |||||||||  |||||||||||||||| |||||||||||||||||||  |
seq2  GTGGAGAAATTGGAACACTCCTCCATTTCTGGTGGGATTGCAAGCTGTTA  50

seq1  CACCCATGATAAAAATCAGTTTGGCTGTTCCTCAGAAAATTGTACATAGT  100
      || ||    |  |||||| | |||  ||||| |||||||||| | |||| 
seq2  CAACCTCTGTGGAAATCAATCTGGAGGTTCCACAGAAAATTGGAAATAGA  100

seq1  ACAACTGGAAGA-TCCAGCAATACCACTCCTGGGTATATACACAGAAATT  149
       | ||  |||||  ||||||||||||||  |||  |||||          
seq2  TCTACCTGAAGACCCCAGCAATACCACTTTTGGAAATATA----------  140

seq1  GCTCCAACTTGTAATAAGGACACATGCTCCACTATTTTCATAGTGGCCTT  199
      ||||               | | |||  |||| |||              
seq2  GCTC---------------AAAGATGTCCCACAATT--------------  161

seq1  TTTTTTCCCACTGATTTCTTCATCTCATCCAATGTTTAAAATTTAACTAA  249
             |||| | |                                   
seq2  -------CCACAGGT-----------------------------------  169

seq1  GTCAGGTCAGTATTTTTTTTTTAGTTTTTTATTAGATAATTTCTTCAGTT  299
       ||| ||                                        |||
seq2  -TCACGT----------------------------------------GTT  178

seq1  ATATTTCAAAAGTCCCCTATACCTTCCCTCCGCCCTGCTTCTCAACCCAC  349
      |             | |||||              || ||| || |    
seq2  A-------------CACTATA--------------TG-TTCACAGC----  196

seq1  CCACTCCTGCTTCCTGGCCCTGGCATTTCCCTGTACTGGGGCATAGTAGC  399
                      ||| |||  ||||                 | ||
seq2  ---------------AGCCATGG--TTTC---------------GATTGC  214

seq1  CTTTTTTAAAATAGCCAGAAAGGATCCAGATGTCCCTCAACAGAGGAATG  449
      |        |  |||  ||||  | | |||| ||||   | ||| |||||
seq2  C--------AGAAGCTGGAAAAAACCTAGATATCCCAGGATAGAAGAATG  256

seq1  GATACAGAAAATGTGG  465
       |||||||||||||||
seq2  AATACAGAAAATGTGG  272

seq1: chr4_78313311_78314437
seq2: B6Ng01-071O08.g_68_1178

seq1  GAATTCACATTTAAGTTTTCATATTGATTTTAAACAGTTAAATAATAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATTTAAGTTTTCATATTGATTTTAAACAGTTAAATAATAAAT  50

seq1  GGCCAAAATATGAAGAGGAAAATTAACTTAAAAAGGAAATCACTCTATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAAATATGAAGAGGAAAATTAACTTAAAAAGGAAATCACTCTATAT  100

seq1  CAGTTGGAAAAAGTCAGTGTCTTAAAGAATAGCAATGTATTTGTAACAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGGAAAAAGTCAGTGTCTTAAAGAATAGCAATGTATTTGTAACAAT  150

seq1  CTCACATATTTAATATAAAAGGAAAATATATGAGGTCCGTATGTGAATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACATATTTAATATAAAAGGAAAATATATGAGGTCCGTATGTGAATTG  200

seq1  CCAGCTGATAAATAATCCAGCTATAACATATTCTTGGTTTGGGGAGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGATAAATAATCCAGCTATAACATATTCTTGGTTTGGGGAGAATT  250

seq1  GAAGAATTTTATTAAGATGTCTGAATTGATTTTTAAATTAGGAAGCATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATTTTATTAAGATGTCTGAATTGATTTTTAAATTAGGAAGCATTA  300

seq1  AAATGAAAAGAGAACTCCTTGTGATGATGTTGTGAGATTGCACCATTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAAAGAGAACTCCTTGTGATGATGTTGTGAGATTGCACCATTGCT  350

seq1  GTGTTACAAAGTCACAAAGTGCTAAAAAAAAAAAGCAATGCTGTGACCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTACAAAGTCACAAAGTGCTAAAAAAAAAAAGCAATGCTGTGACCTT  400

seq1  GACTGTCAGCCTTCTTCCATCTCTGCTTGCATACTGCTTTCTGGGTTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTCAGCCTTCTTCCATCTCTGCTTGCATACTGCTTTCTGGGTTGAC  450

seq1  CTTAAGAGACTCTATCAGCTCTCTGCTGTGAGCTATGGGCAAACTGCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGAGACTCTATCAGCTCTCTGCTGTGAGCTATGGGCAAACTGCTGG  500

seq1  CAAGGCACTATCAATGTTCCTTCTGAAAAATCAACAGTGACAGTCCTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCACTATCAATGTTCCTTCTGAAAAATCAACAGTGACAGTCCTTCC  550

seq1  CTAGTCTTTCCTGTGCTCATTATCTTTGTCTCCGTAGCAAAAATTCCTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCTTTCCTGTGCTCATTATCTTTGTCTCCGTAGCAAAAATTCCTAC  600

seq1  TACAAATAAAACACCTTTCCATGTTTAGACTTTTCAACCAGTAGAGCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATAAAACACCTTTCCATGTTTAGACTTTTCAACCAGTAGAGCTAA  650

seq1  GCTATAGGATAAAAATCATGCCTAAGGGAAATGTTTTGTTTTCTGCATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAGGATAAAAATCATGCCTAAGGGAAATGTTTTGTTTTCTGCATAG  700

seq1  ATGTATATACACAACCATATGATCATCATTTAGGAAGACTAAGATGGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATATACACAACCATATGATCATCATTTAGGAAGACTAAGATGGCTC  750

seq1  AGCAAATTAGAAAGCTTGCTGATATTCAGAGGTCTGAAATTAAGTTCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATTAGAAAGCTTGCTGATATTCAGAGGTCTGAAATTAAGTTCATG  800

seq1  GAACCCAAGTTAGACAGCTCACAACTGTTTATGACTCCGCCTTCAGAGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCAAGTTAGACAGCTCACAACTGTTTATGACTCCGCCTTCAGAGTA  850

seq1  GTCAATGCTCTCTTTTAGTCTCAGTGTGTATTTACACACCTGCATGCATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATGCTCTCTTTTAGTCTCAGTGTGTATTTACACACCTGCATGCATA  900

seq1  CACAAAGACATTTATGTACACATAAATAAAATTAATATTTCATTTTGTTT  950
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CACAAAGACATTTATGTACACATAAAT-AAATTAATATTTCATTTTGTTT  949

seq1  TGCTTTTTACTACTTTTATATTGAACCAAATGGGTGAAATTACTATTGCC  1000
      ||| ||||||||| ||||||||| ||||||||||||||||||||||||||
seq2  TGC-TTTTACTAC-TTTATATTG-ACCAAATGGGTGAAATTACTATTGCC  996

seq1  TCATATGTACAAAAGTATAGGATTTTCATCCAGGGGATGAACAATGTATC  1050
      |||||||||||||||||||||| ||||||||| |||||||   || ||||
seq2  TCATATGTACAAAAGTATAGGA-TTTCATCCA-GGGATGA--CATTTATC  1042

seq1  AGTGTCCACGTTCCTGAATAAAAGTGGTTTTTCATCCCCTGTCAACTGTC  1100
      ||||| |||| |||||||||||    || |||||| ||||||| ||||||
seq2  AGTGT-CACG-TCCTGAATAAA----GTGTTTCAT-CCCTGTC-ACTGTC  1084

seq1  AGCTGCTAATAGCTCCTATGGT-AGAGA  1127
      ||||||| |||||| ||||||| |||||
seq2  AGCTGCT-ATAGCTTCTATGGTAAGAGA  1111