BAC Information

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BAC

Clone NameB6Ng01-072K11
Chromosome4 (Build37)
Map Location 85,807,291 - 85,935,928
singlet/doubletdoublet
Overlap geneAdamtsl1
Upstream geneLOC100040303, Sh3gl2, A930009N24, LOC668052
Downstream gene4930500O09Rik, Rraga, 6230416J20Rik, LOC100040388, Adfp, EG624685, Dennd4c, Rps6, Asah3l, Slc24a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072K11.bB6Ng01-072K11.g
ACCDH890012DH890013
length1,079886
definitionDH890012|Mus musculus domesticus DNA, BAC clone: B6Ng01-072K11, 5' end.DH890013|Mus musculus domesticus DNA, BAC clone: B6Ng01-072K11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,934,849 - 85,935,928)(85,807,291 - 85,808,054)
sequence
gaattccagggccctgctttcaattaaatttaagtggatttgactagaag
tttgaactgacgctaattggttttcaaaacactgggtaacaataagcgtc
cctctgttacccagagagagatgcacccagttcagcacatgctcctggtt
ggcaggggcagcgacacatcccttaccttgctgggcagggatccaagtta
caggatttcaggagctgcgggggccgtcggctggtcacacacaggttctc
atcagcgagttcccgggtctgtttgttcaggcagcttaccacagcctcct
ggacacctgtgtacaaatcacactgtcaggccagagtgcagagtgggtct
gtgctggggtgacgaagtgtagacaggcagctggtgggaggtctctaatc
agtggggacgctcattgcacattagaggctatggtttgaaacacagcact
gccagtcttgtcaagcatcacttggtctagggctaggagtgtagctcagt
ggctgggtgattgctcagcatgaacaaagaaagccctgggtttgtactca
ggcaccacaactccttaaaagtaattattccgccagaaaggaggaattca
tgagtctgtggcctctcggtgtacctgttgagaagagcaactttctgaaa
acataggtggcggaaatgctttaacaatgctaccaggcagtccagcaact
ctttgcaattagtgttgaaaatgctaaaaaaaaataaatttcccacatga
cccagctctaccactccttagcatatgctagaggactcagcatcccagtt
cacagattcttgctagctcagccttactcacggctcctttatttataata
cccagggaatgggcacaacctcaatgtcttaactgattgaatgaataatg
aaaatgtggtacgcatacagaatggaatgctattcagtttaaagagtatc
atgaatcttgcaggcaaacggattaaactagaaaagatcatattgatcga
agtaacctagacctagaaacaaactaatgtgtctcgcctcatctgagttc
atacttatcaatctttcaaatgtgagtct
gaattctcttgcaaaactaaaataaattgtgtgcttgctgtcttttaaga
attaaggagtcgagccgggcgtggtggcgcacgcctttaatcccagcact
tgggaggcagaggcaggtggatttctgagttcgaggccagccttgtctac
agagtgagttccaggacaaccagggctgcacagagaaaccctgtcttgaa
aaaccaaaaaaaaaaaaaaaaaaaaaaaaagaattaaggagtcagggttg
caggatattgatttatagaaaaatcaaaaagaaacctggagtaaatgatt
tgtttgatatgtaaaataaaaggcttggcttatgatctgcaagggaagct
ttccagaaaaaaataaaaagagaactgcttagagaactgtcttgagcagg
agagagagagagagagagagagagagagagagagagagagagagagagag
agagagagagagagagcagaagagggaacaggcaatctggaaagctgtct
caagcagaacataggtcatcaacttggactcacaatttgactttgactca
tttgtttcactcttcccagacgcccctttctcagaacccctctccaagcc
agggcttgctcttggcaggattatatgacttcctcagggttacctggctt
ttacctggctccccaggagccaatcttcttctgccacaaccaggtgcatc
gagacaatgatcattttggtaataagtcccccaatttgggctacataccc
caaatcacggggcacagttcttaagtcctatcccaccagacattcaaata
tttgagttctatgtctttaaaactatgactctagagcaaatccaattctt
aaactacttataattgtatcgaggtaggacttaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_85934849_85935928
seq2: B6Ng01-072K11.b_41_1119 (reverse)

seq1  AGACTCACATTTGAAGATTTGAT-AGTATGAACTTCAGATGA-GCGAGGA  48
      |||||||||||||||   ||||| ||||||||| |||||||| |||| ||
seq2  AGACTCACATTTGAAAGATTGATAAGTATGAAC-TCAGATGAGGCGA-GA  48

seq1  CACATTATGTTTGTTTCTAGGTCTAGGTTACTTCGATCAATATGATCTTT  98
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTA-GTTTGTTTCTAGGTCTAGGTTACTTCGATCAATATGATCTTT  97

seq1  TCTAGTTTTATCCGTTTGCCTGCAAGATTCATGATACTCTTTACAACTGA  148
      |||||||| |||||||||||||||||||||||||||||||||| ||||||
seq2  TCTAGTTTAATCCGTTTGCCTGCAAGATTCATGATACTCTTTA-AACTGA  146

seq1  ATAGCATTCCATTCTGTATGCGTACCACATTTTCATTATTCATTC-ATCA  197
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATAGCATTCCATTCTGTATGCGTACCACATTTTCATTATTCATTCAATCA  196

seq1  GTTAAGGACATTGAGGTTGTGCCCATTCCCTGGGTATTATAAATAAAGGA  247
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAA-GACATTGAGGTTGTGCCCATTCCCTGGGTATTATAAATAAAGGA  245

seq1  GCCGTGAGTAAGGCTGAGCTAGCAAGAATCTGTGAACTGGGATGCTGAGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTGAGTAAGGCTGAGCTAGCAAGAATCTGTGAACTGGGATGCTGAGT  295

seq1  CCTCTAGCATATGCTAAGGAGTGGTAGAGCTGGGTCATGTGGGAAATTTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAGCATATGCTAAGGAGTGGTAGAGCTGGGTCATGTGGGAAATTTA  345

seq1  TTTTTTTTTAGCATTTTCAACACTAATTGC-AAGAGTTGCTGGACTGCCT  396
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTTTTTTTAGCATTTTCAACACTAATTGCAAAGAGTTGCTGGACTGCCT  395

seq1  GGTAGCATTGTTAAAGCATTTCCGCCACCTATGTTTTCAGAAAGTTGCTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCATTGTTAAAGCATTTCCGCCACCTATGTTTTCAGAAAGTTGCTC  445

seq1  TTCTCAACAGGTACACCGAGAGGCCACAGACTCATGAATTCCTCCTTTCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAACAGGTACACCGAGAGGCCACAGACTCATGAATTCCTCCTTTCT  495

seq1  GGCGGAATAATTACTTTTAAGGAGTTGTGGTGCCTGAGTACAAACCCAGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGAATAATTACTTTTAAGGAGTTGTGGTGCCTGAGTACAAACCCAGG  545

seq1  GCTTTCTTTGTTCATGCTGAGCAATCACCCAGCCACTGAGCTACACTCCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTTTGTTCATGCTGAGCAATCACCCAGCCACTGAGCTACACTCCT  595

seq1  AGCCCTAGACCAAGTGATGCTTGACAAGACTGGCAGTGCTGTGTTTCAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTAGACCAAGTGATGCTTGACAAGACTGGCAGTGCTGTGTTTCAAA  645

seq1  CCATAGCCTCTAATGTGCAATGAGCGTCCCCACTGATTAGAGACCTCCCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGCCTCTAATGTGCAATGAGCGTCCCCACTGATTAGAGACCTCCCA  695

seq1  CCAGCTGCCTGTCTACACTTCGTCACCCCAGCACAGACCCACTCTGCACT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGCCTGTCTACACTTCGTCACCCCAGCACAGACCCACTCTGCACT  745

seq1  CTGGCCTGACAGTGTGATTTGTACACAGGTGTCCAGGAGGCTGTGGTAAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTGACAGTGTGATTTGTACACAGGTGTCCAGGAGGCTGTGGTAAG  795

seq1  CTGCCTGAACAAACAGACCCGGGAACTCGCTGATGAGAACCTGTGTGTGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGAACAAACAGACCCGGGAACTCGCTGATGAGAACCTGTGTGTGA  845

seq1  CCAGCCGACGGCCCCCGCAGCTCCTGAAATCCTGTAACTTGGATCCCTGC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCGACGGCCCCCGCAGCTCCTGAAATCCTGTAACTTGGATCCCTGC  895

seq1  CCAGCAAGGTAAGGGATGTGTCGCTGCCCCTGCCAACCAGGAGCATGTGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAAGGTAAGGGATGTGTCGCTGCCCCTGCCAACCAGGAGCATGTGC  945

seq1  TGAACTGGGTGCATCTCTCTCTGGGTAACAGAGGGACGCTTATTGTTACC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGGGTGCATCTCTCTCTGGGTAACAGAGGGACGCTTATTGTTACC  995

seq1  CAGTGTTTTGAAAACCAATTAGCGTCAGTTCAAACTTCTAGTCAAATCCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTTTGAAAACCAATTAGCGTCAGTTCAAACTTCTAGTCAAATCCA  1045

seq1  CTTAAATTTAATTGAAAGCAGGGCCCTGGAATTC  1080
      ||||||||||||||||||||||||||||||||||
seq2  CTTAAATTTAATTGAAAGCAGGGCCCTGGAATTC  1079

seq1: chr4_85807291_85808054
seq2: B6Ng01-072K11.g_186_954

seq1  TGGATTTCTGAGTTCGAGGCCAGCCTTGTCTACAGAGTGAGTTCCAGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTCTGAGTTCGAGGCCAGCCTTGTCTACAGAGTGAGTTCCAGGAC  50

seq1  AACCAGGGCTGCACAGAGAAACCCTGTCTTGAAAAACCAAAAAAAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGGGCTGCACAGAGAAACCCTGTCTTGAAAAACCAAAAAAAAAAAA  100

seq1  AAAAAAAAAAAAAGAATTAAGGAGTCAGGGTTGCAGGATATTGATTTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAGAATTAAGGAGTCAGGGTTGCAGGATATTGATTTATA  150

seq1  GAAAAATCAAAAAGAAACCTGGAGTAAATGATTTGTTTGATATGTAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATCAAAAAGAAACCTGGAGTAAATGATTTGTTTGATATGTAAAAT  200

seq1  AAAAGGCTTGGCTTATGATCTGCAAGGGAAGCTTTCCAGAAAAAAATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCTTGGCTTATGATCTGCAAGGGAAGCTTTCCAGAAAAAAATAAA  250

seq1  AAGAGAACTGCTTAGAGAACTGTCTTGAGCAGGAGAGAGAGAGAGAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAACTGCTTAGAGAACTGTCTTGAGCAGGAGAGAGAGAGAGAGAGA  300

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGC  350

seq1  AGAAGAGGGAACAGGCAATCTGGAAAGCTGTCTCAAGCAGAACATAGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGGAACAGGCAATCTGGAAAGCTGTCTCAAGCAGAACATAGGTC  400

seq1  ATCAACTTGGACTCACAATTTGACTTTGACTCATTTGTTTCACTCTTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTTGGACTCACAATTTGACTTTGACTCATTTGTTTCACTCTTCCC  450

seq1  AGACGCCCCTTTCTCAGAACCCCTCTCCAAGCCAGGGCTTGCTCTTGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGCCCCTTTCTCAGAACCCCTCTCCAAGCCAGGGCTTGCTCTTGGCA  500

seq1  GGATTATATGACTTCCTCAGGGTTACCTGGC-TTTACCTGGCT-CCCAGG  548
      ||||||||||||||||||||||||||||||| ||||||||||| ||||||
seq2  GGATTATATGACTTCCTCAGGGTTACCTGGCTTTTACCTGGCTCCCCAGG  550

seq1  AGCCAATC-TCTTCTGCCACAACCAGGTGCATCGAGACAATGATCA-TTT  596
      |||||||| ||||||||||||||||||||||||||||||||||||| |||
seq2  AGCCAATCTTCTTCTGCCACAACCAGGTGCATCGAGACAATGATCATTTT  600

seq1  GGTAAT-AGTCCCCCAATTT-GGCTACATA-CCCAAATCACCTGGCACAG  643
      |||||| ||||||||||||| ||||||||| ||||||||||  |||||||
seq2  GGTAATAAGTCCCCCAATTTGGGCTACATACCCCAAATCACGGGGCACAG  650

seq1  CTCTTAAGTCCTAT-CCACCAGACATTCAAATATTTGAGTTCTATGTCTT  692
       ||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTCTTAAGTCCTATCCCACCAGACATTCAAATATTTGAGTTCTATGTCTT  700

seq1  TAAAACTATGACTCTGAGGCAAAATCAAATTCATAAACTACTTATAGATT  742
      ||||||||||||||| ||   ||||| ||||| ||||||||||||| |||
seq2  TAAAACTATGACTCT-AGAGCAAATCCAATTCTTAAACTACTTATA-ATT  748

seq1  GGATAGCAGGTAGGACTTAAAA  764
      | || | |||||||||||||||
seq2  GTATCG-AGGTAGGACTTAAAA  769