BAC Information

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BAC

Clone NameB6Ng01-072L10
Chromosome4 (Build37)
Map Location 38,546,553 - 38,547,812
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC277771, LOC100039448
Downstream geneLOC665520, LOC100039487, 1700009N14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072L10.bB6Ng01-072L10.g
ACCDH890052DH890053
length1,2591,013
definitionDH890052|Mus musculus domesticus DNA, BAC clone: B6Ng01-072L10, 5' end.DH890053|Mus musculus domesticus DNA, BAC clone: B6Ng01-072L10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaaataatacagaaatgaagtgatcaaaacattgctcggggtt
attgttaaaacactgtgggaagatgctgttccatgatattgaatgtgaac
ataagaaagcattgctacccacagaagacaaagtgataacagagaattgg
agtgcacacaattaaccacacctagtgataataaatctactttcaagtgg
ctgtaagtagccttcttttctcctgctcacattaatagttgattttctag
tcaggtgcattatcgatcgttttccactgaagccatttcttcctcattag
ctttccaaacttttctcttcctcaatttttctcagacacaaaagactcaa
agattacagacaacttgttgctaggcaacaatctcatttctgtaactgta
atggttgggctttcaatgtcacccatattggctgaagaggtcatatgttt
acctgtttgcagtatttattctttctaattatgaaagtaagatatttatt
aactttaagtaaaatatccttccatgagtagttttagttatatcatacat
agctgtattaagaaaataaactgatttatgatttttaaatgtgtcagaaa
tgtattcctgcttaaaataaaaatttaaaaacctgctttttatttagaac
ttttattataatacctgaaaaaaaaaactggcattgcttatattggtaaa
gcctatatcttattactttatcaagggatagattatagatatttataagc
aaattcaaattctataatttaatacttagtctatattttgaaaggcaaag
tatcctctactgttctttggttagttaaatatagattatgggagaaacac
tgacacaacttaagagggtgcccctcaaatgctaccctggtcatccccat
tttctggggcatcaagtctttagaggattagggatatcttctcccactgg
ggccagacaaggcagtcagtcctatgctacatatgtgcctggggcatcag
gataagctctttggttggtggcttagtcatgggagctccccagcgtccag
tttgtagacactgttggtcttcttatggagtgccacccccttcagttctt
tcagtacattcctaactctcgtgagcaactagcctcagttcagtgtgttg
tcttgttagaatctgcaattatctctagtcgaccggcctagatagagctc
tcgagacgcaatgctaggctcatttatatgccaaagatagcatctcaggt
atatagtga

gaattctgtttacatctgaattccatttttaaaattaggctatttttttg
tgatatctagtttcttgtgttctttatatattttggatattaaccctatt
tcagatatggagttggtaaaaaaatttaccattctataagctgctgcatt
gttctctcccctacaggagctttttcatttttatgaggtcccactaatta
atattgatactgcatatgttaatggtgttctgttcatcaagtctttttct
gtgctaatgagttaaagattaattccaacttttccttctataattttcag
agaatctgattttatgttgatcctttaagatttaaagtttgtgcaaggta
gtaaatatgactctattagattcttgtacatgtgggcatccagcttggac
catatcagttattgaagatgctgtattttgtccagtgtatatttttggat
ttaccaaaaatcaggtggccatgggtatgcacattcatgtgtgggtcttc
agtttaattcagttctgttttctggcattactgtgctgtttttattatgt
aagccttatcatataatttgaagtcaggaatggtgacatctccagaagtt
gatttatcattcaggattgttttcagatattctgatttctgtctgtattt
catttggaagcttacaattattctttcaatatccatgaataattgtgttg
gaaatttgatggtgagagaattgaatctttagattgttttggataggtta
gtcactttcttttgttaatcctacaaatccatgagaagaaagaacctttc
catcttataatatcttttaatttattttttcagcatttttaatttgtctt
tcacttgcttggctagaattaccccaatatattatattatatatatatat
tatattatatatatatatatatatattatagagctattgtgagagtacta
tttcattattttctcagtcacgcatcattgtacatgggaaggctattatt
ttttgatgactta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_38546553_38547812
seq2: B6Ng01-072L10.b_47_1305 (reverse)

seq1  TCACTATA-AC---TGATGCTATCTTTTGCATATAAATGAGCTTAGCATG  46
      |||||||| ||    |||||||||||| |||||||||||||| |||||| 
seq2  TCACTATATACCTGAGATGCTATCTTTGGCATATAAATGAGCCTAGCATT  50

seq1  GCCGTCCTCTGAGAGGCTCTACCTAG--CAGCTGACT-GAGATAGATGCA  93
      | ||| ||| |||| |||||| ||||  | |  |||| ||||||  ||||
seq2  G-CGT-CTC-GAGA-GCTCTATCTAGGCCGGTCGACTAGAGATAATTGCA  96

seq1  GATTCTTAC-AGACAAC-CACTGGACTGAGGCCTAGGTTGCTCACGGAAG  141
      |||||| || ||||||| ||||| ||||||| ||| ||||||||||  ||
seq2  GATTCTAACAAGACAACACACTGAACTGAGG-CTA-GTTGCTCACG--AG  142

seq1  AGTTAGGGAATGTACTGAAAGAACTGAAGGGGGTGGCAACTCCATAAGAA  191
      ||||| ||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGTTA-GGAATGTACTGAAAGAACTGAAGGGGGTGGC-ACTCCATAAGAA  190

seq1  GACCAACAGTGTCTACAAACCTGGACGCTGGGGAGCTCCCATGACTAAGC  241
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GACCAACAGTGTCTACAAA-CTGGACGCTGGGGAGCTCCCATGACTAAGC  239

seq1  CACCAACCAAAGAGC-TATCCTGATGCCCCAGGCACATATGTAGCATAGG  290
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CACCAACCAAAGAGCTTATCCTGATGCCCCAGGCACATATGTAGCATAGG  289

seq1  ACTGACTGCCTTGTCTGGCCCCAGTGGGAGAAGATATCCCTAATCCTCTA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACTGCCTTGTCTGGCCCCAGTGGGAGAAGATATCCCTAATCCTCTA  339

seq1  AAGACTTGATGCCCCAGAAAATGGGGATGACCAGGGTAGCATTTGAGGGG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTGATGCCCCAGAAAATGGGGATGACCAGGGTAGCATTTGAGGGG  389

seq1  CACCCTCTTAAGTTGTGTCAGTGTTTCTCCCATAATCTATATTTAACTAA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCTTAAGTTGTGTCAGTGTTTCTCCCATAATCTATATTTAACTAA  439

seq1  CCAAAGAACAGTAGAGGATACTTTGCCTTTCAAAATATAGACTAAGTATT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAACAGTAGAGGATACTTTGCCTTTCAAAATATAGACTAAGTATT  489

seq1  AAATTATAGAATTTGAATTTGCTTATAAATATCTATAATCTATCCCTTGA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATAGAATTTGAATTTGCTTATAAATATCTATAATCTATCCCTTGA  539

seq1  TAAAGTAATAAGATATAGGCTTTACCAATATAAGCAATGCCAGTTTTTTT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTAATAAGATATAGGCTTTACCAATATAAGCAATGCCAGTTTTTTT  589

seq1  TTTCAGGTATTATAATAAAAGTTCTAAATAAAAAGCAGGTTTTTAAATTT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGTATTATAATAAAAGTTCTAAATAAAAAGCAGGTTTTTAAATTT  639

seq1  TTATTTTAAGCAGGAATACATTTCTGACACATTTAAAAATCATAAATCAG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAAGCAGGAATACATTTCTGACACATTTAAAAATCATAAATCAG  689

seq1  TTTATTTTCTTAATACAGCTATGTATGATATAACTAAAACTACTCATGGA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTCTTAATACAGCTATGTATGATATAACTAAAACTACTCATGGA  739

seq1  AGGATATTTTACTTAAAGTTAATAAATATCTTACTTTCATAATTAGAAAG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATTTTACTTAAAGTTAATAAATATCTTACTTTCATAATTAGAAAG  789

seq1  AATAAATACTGCAAACAGGTAAACATATGACCTCTTCAGCCAATATGGGT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATACTGCAAACAGGTAAACATATGACCTCTTCAGCCAATATGGGT  839

seq1  GACATTGAAAGCCCAACCATTACAGTTACAGAAATGAGATTGTTGCCTAG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTGAAAGCCCAACCATTACAGTTACAGAAATGAGATTGTTGCCTAG  889

seq1  CAACAAGTTGTCTGTAATCTTTGAGTCTTTTGTGTCTGAGAAAAATTGAG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGTTGTCTGTAATCTTTGAGTCTTTTGTGTCTGAGAAAAATTGAG  939

seq1  GAAGAGAAAAGTTTGGAAAGCTAATGAGGAAGAAATGGCTTCAGTGGAAA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAAAAGTTTGGAAAGCTAATGAGGAAGAAATGGCTTCAGTGGAAA  989

seq1  ACGATCGATAATGCACCTGACTAGAAAATCAACTATTAATGTGAGCAGGA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATCGATAATGCACCTGACTAGAAAATCAACTATTAATGTGAGCAGGA  1039

seq1  GAAAAGAAGGCTACTTACAGCCACTTGAAAGTAGATTTATTATCACTAGG  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAGGCTACTTACAGCCACTTGAAAGTAGATTTATTATCACTAGG  1089

seq1  TGTGGTTAATTGTGTGCACTCCAATTCTCTGTTATCACTTTGTCTTCTGT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTAATTGTGTGCACTCCAATTCTCTGTTATCACTTTGTCTTCTGT  1139

seq1  GGGTAGCAATGCTTTCTTATGTTCACATTCAATATCATGGAACAGCATCT  1190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGCAATGCTTTCTTATGTTCACATTCAATATCATGGAACAGCATCT  1189

seq1  TCCCACAGTGTTTTAACAATAACCCCGAGCAATGTTTTGATCACTTCATT  1240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACAGTGTTTTAACAATAACCCCGAGCAATGTTTTGATCACTTCATT  1239

seq1  TCTGTATTATTTAAGAATTC  1260
      ||||||||||||||||||||
seq2  TCTGTATTATTTAAGAATTC  1259


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