BAC Information

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BAC

Clone NameB6Ng01-072M11
Chromosome4 (Build37)
Map Location 10,416,641 - 10,592,219
singlet/doubletdoublet
Overlap genenone
Upstream geneAsph, Gdf6, 4930448K20Rik, LOC666840
Downstream gene1700123O12Rik, LOC383991, LOC100039656, LOC545589, 2610301B20Rik, LOC383992, LOC100039746, Plekhf2, 2310030N02Rik, LOC546828, LOC666897, Trp53inp1, Ccne2, Ints8, Dpy19l4, Rbm35a, LOC634834, 1110037F02Rik, LOC100039847, E130016E03Rik, LOC100039862
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072M11.bB6Ng01-072M11.g
ACCDH890094DH890095
length1,048673
definitionDH890094|Mus musculus domesticus DNA, BAC clone: B6Ng01-072M11, 5' end.DH890095|Mus musculus domesticus DNA, BAC clone: B6Ng01-072M11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,591,166 - 10,592,219)(10,416,641 - 10,417,312)
sequence
gaattctgttacttataatttgccttttaattttggagaaactcttgtag
ttttttcattcaatagagttatgatctttgttttgtataatgtttttagt
tttattcacctaggtctttaaattttttatttcttggtatttcataattt
tgtttgttttaaaataggtctcccacttttttgctagtgtttgttctgga
atagagttagatcattgatttaaactttttaaaaaattcttattcatttt
ctttccagttgtgtttttaatctctttcaaattatttaatctctcattag
tattcagagaaaccacttctttccatcacctggaaggtgacaggctctct
cagtacatggttgctgtgcttgtatgacctctatggctactcatttaagt
tttccccttgtggaatattgtaaatttcttcttttttaccctcttaacag
taatttttgccttctccttctatacattttctatgtctatctgctgaatt
ttatcattagtttgtgattttttttcttaatttatatctcttacatttta
accaacagtccttacttatcacaaattatataccatacaaataacctata
catcttcataaagatttatgtgtactcacatatgcacacatatcaataat
cattgacagtgatttttattcttatgttttctcatgttgatatctgttct
tgttaatttattaatgtgttaattgctcttcagctattttcttcaaatgg
gttattagagtaatatatacttttcatctttgagttgtttgttcgataaa
attgaattatattgcttggtagtttgctctgtttaagttttaggactgaa
gtctgctttaagacaaacaattgaggttgccttctagtcactcaccttga
gggactaattgaaggtgaccctgaagtgctgggaaatactctttgttttg
catcaacctgcatcttggagtctgactcagggtttcttggagtagtatca
ctgactgaaggttggggtctacatttggggcctcattctgggacttga
gaattctcctttgcctcggacgtgtcactccctgattggctgcagcccat
cggccgagttgacgtcacggggaaggcagagcacaagtagtcataagata
cccttggcacatgcgcagattatttgtttaccacttagaacacagctgtc
agcgccatcttgtaacggcgaatgtgggcgcggctcccaacagcaccctt
aggatgaaacgatgtccctcattatctccaataatctcttacctgtttgt
ttattttaaagtctattttgtctgatagagatattccatgttctaatggt
taaggttttagtggcatatgtttttatacccttttgttattaaaacattg
tatatatttaaatttattgtatatctcattgtgttgaataagaatggccc
ccatgactggagctaaaaccccaactcctactggcacatatgtagtggct
gtgttgatttgtcttcatgagggtcccccaaaacatgagtgggagcagtc
catggctctattgcctacctgtagatctgattccccctactgggctgcct
cctcttgcctcagtgggagtgtatgtgtgtagtcctgcagtgacttgata
tgccatgttttgtagcctggaggtttctccaacttctcagaggagaaggg
gattgtggtatggggggatagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_10591166_10592219
seq2: B6Ng01-072M11.b_46_1093 (reverse)

seq1  TCAAGTCCCAGAATGAGCCCCCAAATGTAAGACCCCAACCCTCAGTCAGT  50
      ||||||||||||||||| |||||||||| ||||||||||| |||||||||
seq2  TCAAGTCCCAGAATGAGGCCCCAAATGT-AGACCCCAACCTTCAGTCAGT  49

seq1  GATACTTACTTCAAGAAACCCCTGAGTCAGACTCCAAGATGCAGGTTGAT  100
      ||||| |||| ||||||| |||||||||||||||||||||||||||||||
seq2  GATAC-TACTCCAAGAAA-CCCTGAGTCAGACTCCAAGATGCAGGTTGAT  97

seq1  GCAAAACAAAAGAGTTATTTTCCAGCACTTCAGGGTCAACCTTCAATTAG  150
      ||||||| |||||| ||||| |||||||||||||||| ||||||||||||
seq2  GCAAAAC-AAAGAG-TATTTCCCAGCACTTCAGGGTC-ACCTTCAATTAG  144

seq1  TCCCTCAAGGTGAGTGACTAGAAGGCAACCTCAATTGTTTGTCTTAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCAAGGTGAGTGACTAGAAGGCAACCTCAATTGTTTGTCTTAAAGC  194

seq1  AGACTTCAGTCCTAAAACTTAAACAGAGCAAACTACCAAGCAATATAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCAGTCCTAAAACTTAAACAGAGCAAACTACCAAGCAATATAATT  244

seq1  CAATTTTATCGAACAAACAACTCAAAGATGAAAAGTATATATTACTCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTATCGAACAAACAACTCAAAGATGAAAAGTATATATTACTCTAA  294

seq1  TAACCCATTTGAAGAAAATAGCTGAAGAGCAATTAACACATTAATAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCATTTGAAGAAAATAGCTGAAGAGCAATTAACACATTAATAAATT  344

seq1  AACAAGAACAGATATCAACATGAGAAAACATAAGAATAAAAATCACTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAACAGATATCAACATGAGAAAACATAAGAATAAAAATCACTGTC  394

seq1  AATGATTATTGATATGTGTGCATATGTGAGTACACATAAATCTTTATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTATTGATATGTGTGCATATGTGAGTACACATAAATCTTTATGAA  444

seq1  GATGTATAGGTTATTTGTATGGTATATAATTTGTGATAAGTAAGGACTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTATAGGTTATTTGTATGGTATATAATTTGTGATAAGTAAGGACTGT  494

seq1  TGGTTAAAATGTAAGAGATATAAATTAAGAAAAAAAATCACAAACTAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAAAATGTAAGAGATATAAATTAAGAAAAAAAATCACAAACTAATG  544

seq1  ATAAAATTCAGCAGATAGACATAGAAAATGTATAGAAGGAGAAGGCAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTCAGCAGATAGACATAGAAAATGTATAGAAGGAGAAGGCAAAA  594

seq1  ATTACTGTTAAGAGGGTAAAAAAGAAGAAATTTACAATATTCCACAAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGTTAAGAGGGTAAAAAAGAAGAAATTTACAATATTCCACAAGGG  644

seq1  GAAAACTTAAATGAGTAGCCATAGAGGTCATACAAGCACAGCAACCATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTTAAATGAGTAGCCATAGAGGTCATACAAGCACAGCAACCATGT  694

seq1  ACTGAGAGAGCCTGTCACCTTCCAGGTGATGGAAAGAAGTGGTTTCTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGAGAGCCTGTCACCTTCCAGGTGATGGAAAGAAGTGGTTTCTCTG  744

seq1  AATACTAATGAGAGATTAAATAATTTGAAAGAGATTAAAAACACAACTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTAATGAGAGATTAAATAATTTGAAAGAGATTAAAAACACAACTGG  794

seq1  AAAGAAAATGAATAAGAATTTTTTAAAAAGTTTAAATCAATGATCTAACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAATGAATAAGAATTTTTTAAAAAGTTTAAATCAATGATCTAACT  844

seq1  CTATTCCAGAACAAACACTAGCAAAAAAGTGGGAGACCTATTTTAAAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCCAGAACAAACACTAGCAAAAAAGTGGGAGACCTATTTTAAAACA  894

seq1  AACAAAATTATGAAATACCAAGAAATAAAAAATTTAAAGACCTAGGTGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATTATGAAATACCAAGAAATAAAAAATTTAAAGACCTAGGTGAA  944

seq1  TAAAACTAAAAACATTATACAAAACAAAGATCATAACTCTATTGAATGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTAAAAACATTATACAAAACAAAGATCATAACTCTATTGAATGAA  994

seq1  AAAACTACAAGAGTTTCTCCAAAATTAAAAGGCAAATTATAAGTAACAGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTACAAGAGTTTCTCCAAAATTAAAAGGCAAATTATAAGTAACAGA  1044

seq1  ATTC  1054
      ||||
seq2  ATTC  1048

seq1: chr4_10416641_10417312
seq2: B6Ng01-072M11.g_69_741

seq1  GAATTCTCCTTCGCCTCGGACGTGTCACTCCCTGATTGGCTGCAGCCCAT  50
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTTGCCTCGGACGTGTCACTCCCTGATTGGCTGCAGCCCAT  50

seq1  CGGCCGAGTTGACGTCACGGGGAAGGCAGAGCACAAGTAGTCATAAGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCGAGTTGACGTCACGGGGAAGGCAGAGCACAAGTAGTCATAAGATA  100

seq1  CCCTTGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACAGCTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACAGCTGTC  150

seq1  AGCGCCATCTTGTAACGGCGAATGTGGGCGCGGCTCCCAACAGCACCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCCATCTTGTAACGGCGAATGTGGGCGCGGCTCCCAACAGCACCCTT  200

seq1  AGGATGAAACGATGTCCCTCATTATCTCCAATAATCTCTTACCTGTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGAAACGATGTCCCTCATTATCTCCAATAATCTCTTACCTGTTTGT  250

seq1  TTATTTTAAAGTCTATTTTGTCTGATAGAGATATTCCATGTTCTAATGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAAAGTCTATTTTGTCTGATAGAGATATTCCATGTTCTAATGGT  300

seq1  TAAGGTTTTAGTGGCATATGTTTTTATACCCTTTTGTTATTAAAACATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTTTTAGTGGCATATGTTTTTATACCCTTTTGTTATTAAAACATTG  350

seq1  TATATATTTAAATTTATTGTATATCTCATTGTGTTGAATAAGAATGGCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTTAAATTTATTGTATATCTCATTGTGTTGAATAAGAATGGCCC  400

seq1  CCATGACTGGAGCTAAAACCCCAACTCCTACTGGCACATATGTAGTGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGACTGGAGCTAAAACCCCAACTCCTACTGGCACATATGTAGTGGCT  450

seq1  GTGTTGATTTGTCTTCATGAGGGTCCCCCAAAACATGAGTGGGAGCAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGATTTGTCTTCATGAGGGTCCCCCAAAACATGAGTGGGAGCAGTC  500

seq1  CATGGCTCTATTGCCTACCTGTAGATCTGATTCCCCCTACTGGGCTGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTCTATTGCCTACCTGTAGATCTGATTCCCCCTACTGGGCTGCCT  550

seq1  CCTCTTGCCTCAGTGGGAGTGTATGTGTGTAGTCCTGCAGTGACTTGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTGCCTCAGTGGGAGTGTATGTGTGTAGTCCTGCAGTGACTTGATA  600

seq1  TGCCATGTTTTGTAGCCTGGAGGTTTCTCCAACTTCTCAGAGGAGAAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGTTTTGTAGCCTGGAGGTTTCTCCAACTTCTCAGAGGAGAAGGG  650

seq1  GATTGTGGTAT-GGGGGATAGCT  672
      ||||||||||| |||||||||||
seq2  GATTGTGGTATGGGGGGATAGCT  673