BAC Information

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BAC

Clone NameB6Ng01-072O02
Chromosome4 (Build37)
Map Location 24,174,130 - 24,294,171
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC625462, LOC383998, LOC100040464, LOC623873, LOC664973
Downstream geneF730047E07Rik, Klhl32, 1110007M04Rik, C230012O17Rik, Gpr63, Fhl5, 1810074P20Rik, Prdx6-rs2, LOC665019
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072O02.bB6Ng01-072O02.g
ACCDH890168DH890169
length7581,036
definitionDH890168|Mus musculus domesticus DNA, BAC clone: B6Ng01-072O02, 5' end.DH890169|Mus musculus domesticus DNA, BAC clone: B6Ng01-072O02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,174,130 - 24,174,853)(24,293,136 - 24,294,171)
sequence
gttatttcttttatatagtaagaggatcctgtggatttcaggtcacatac
ttgagcaacaaatttaatagaggtcttgttcctactctctaatctagcag
tgtttaacctcaatgaaagactgtctaataataacaagacatattgatta
tgtgtccaagaaggagatatttagatataaaatgctgaatcttattgtcc
agaaaagaatgtgctgggagatttttagggtcaagtttattagaaactat
ttatgatatctcctatttcattcaataaattttgggttctaatgtgtatc
taaaaacaagtctctaaattaataaataatgcaggtataatttcatttta
ttaaaaatagttttttttcacttaatgtgttctgattatggctttccctc
gctactcctcccagttccttcccacctcccctcccatccagattcactcc
ctttctttttctcattagaaatgaacaggcttctaagagataaaaatata
atataatataatatattataatataatatattatattataatatggtaaa
acaaaactatcacactgaaattgtacacggcaaatcaatagtgggaaaag
agcccaggaacaggtacaagtaactcatagatacaaagatacagtcattt
cacacattcaggtatccaataaattctaaattggaaggtttaatttatac
cctaggacctgttggattaatttagagaaatatatatatatatatataaa
atttaaag
gaattcttagagaagaaaggcagatagaaggacaaagtctcatatattct
accttgtcctccattggttccactattcctcctgtttacttatgtcaacc
tgttataaatcttttataaatgcccaacgatagcactggaaattttggat
attattaagaatttatgtacattaatatatcattatccatataagtagct
tcttcaaaacatataccttacatctatgtactacaatttccacatttgga
agatgctataaaatcttttgtttctcctttaaaagtttctgccaaaaaga
gtattgacattctaatatgtagaaactttatgatcacattctttgagtat
atcctagttaggaccagaggtaagagccaagatccagcccatggttctga
gtggatggatcctctaggaatttcatgaagaccgcaagagcacagctcaa
aaagccagtagtatacattttatgtgtcatctaatgtctcagctttccag
aagcagacactatcttcagaatggatttatggttattagctaacataatt
tttatttaaaattaaggtcaaaagaaatatctggaaatctgagagctttt
cttatagcataataaaatatgagaaaggcaataagttacctagctttctt
ttgtctaatcttcaaagtgattgatttaacacttaggtctttcaaagctc
tgctatttagcataaagcagacaagtttgacttgatgaaatatggagcaa
gcttgatattttcttttcctattgattgactgatgtacaaatgaacccca
aatttcaaaagcagcattttgtaagccattaaggtaaatctaacctgttg
ctttcctgtgacacatcttgatgtataggaatagcctatatatgctcttt
ttccccatattttattggttatttttattttttacatttcaaatgtttat
tgctttcccagtttcctttcacaagcccccttcttcctaccccaccccct
gcctctaggagggtggtggtcccaacttgcccaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_24174130_24174853
seq2: B6Ng01-072O02.b_37_757

seq1  TTCAGGTCACATACTTGAGCAACAAACACTTTAGAGCTCTTGTTCCAACT  50
      ||||||||||||||||||||||||||     ||||| ||||||||| |||
seq2  TTCAGGTCACATACTTGAGCAACAAATTTAATAGAGGTCTTGTTCCTACT  50

seq1  CTCTAATCTAGCAGTGTTTAACCTCAATGAAAGACTGTCTAATAATAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATCTAGCAGTGTTTAACCTCAATGAAAGACTGTCTAATAATAACA  100

seq1  AGACATATTGATTATGTGTCCAAGAAGGAGATATTTAGATATAAAATGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATATTGATTATGTGTCCAAGAAGGAGATATTTAGATATAAAATGCT  150

seq1  GAATCTTATTGTCCAGAAAAGAATGTGCTGGGAGATTTTTAGGGTCAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTATTGTCCAGAAAAGAATGTGCTGGGAGATTTTTAGGGTCAAGT  200

seq1  TTATTAGAAACTATTTATGATATCTCCTATTTCATTCAATAAATTTTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGAAACTATTTATGATATCTCCTATTTCATTCAATAAATTTTGGG  250

seq1  TTCTAATGTGTATCTAAAAACAAGTCTCTAAATTAATAAATAATGCAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATGTGTATCTAAAAACAAGTCTCTAAATTAATAAATAATGCAGGT  300

seq1  ATAATTTCATTTTATTAAAAATAGTTTTTTTTCACTTAATGTGTTCTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTCATTTTATTAAAAATAGTTTTTTTTCACTTAATGTGTTCTGAT  350

seq1  TATGGCTTTCCCTCGCTACTCCTCCCAGTTCCTTCCCACCTCCCCTCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTTTCCCTCGCTACTCCTCCCAGTTCCTTCCCACCTCCCCTCCCA  400

seq1  TCCAGATTCACTCCCTTTCTTTCTCTCATTAGAAATGAACAGGCCTCTAA  450
      |||||||||||||||||||||| ||||||||||||||||||||| |||||
seq2  TCCAGATTCACTCCCTTTCTTTTTCTCATTAGAAATGAACAGGCTTCTAA  450

seq1  GAGATAAAAATATAATATAATATAATATATTATAATATAATATATTATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAAAAATATAATATAATATAATATATTATAATATAATATATTATAT  500

seq1  TATAATATGGTAAAACAAAACTATCACACTGAAATTGTACACGGCAAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATATGGTAAAACAAAACTATCACACTGAAATTGTACACGGCAAATC  550

seq1  AACAGTGGGAAAAGAGCCCAGGAACAGGTACAAGAAACACATAGATACAA  600
      || ||||||||||||||||||||||||||||||| ||| |||||||||||
seq2  AATAGTGGGAAAAGAGCCCAGGAACAGGTACAAGTAACTCATAGATACAA  600

seq1  AGACACAGTCA-TTCACACACTCAGGGATCCAATAAAAGCACTAAATTGG  649
      ||| ||||||| |||||||| ||||| ||||||||||    |||||||||
seq2  AGATACAGTCATTTCACACATTCAGGTATCCAATAAA--TTCTAAATTGG  648

seq1  AAGGTATAATTTATACCCAAAGGACCTGTAGGATAAAAATGAGAGAAATA  699
      ||||| ||||||||||||  ||||||||| ||||  || | |||||||||
seq2  AAGGTTTAATTTATACCC-TAGGACCTGTTGGAT-TAATTTAGAGAAATA  696

seq1  TATATATATATATATAAAATTTAAA  724
      |||||||||||||||||||||||||
seq2  TATATATATATATATAAAATTTAAA  721

seq1: chr4_24293136_24294171
seq2: B6Ng01-072O02.g_70_1105 (reverse)

seq1  GGGTGGGCAAGTGGGGGGCA-CACCCTCATAGAGGCAGGGGGTGGGGGTA  49
      |||||||||||| |||  || ||||||| |||||||||||||| ||||||
seq2  GGGTGGGCAAGTTGGGACCACCACCCTCCTAGAGGCAGGGGGT-GGGGTA  49

seq1  GGGAGAAGGGGGCTTGTGGAAAGGAAACTGGG-AAGCAATAAAACATTTG  98
      || |||||||||||||| |||||||||||||| ||||||| |||||||||
seq2  GGAAGAAGGGGGCTTGT-GAAAGGAAACTGGGAAAGCAAT-AAACATTTG  97

seq1  AAATGTAAATAAATAAAATAACCAATAAAAATATGGGGAAAAAAGAGCAT  148
      ||||||||| ||  |||||||||||| ||||||||||| |||||||||||
seq2  AAATGTAAAAAATAAAAATAACCAAT-AAAATATGGGG-AAAAAGAGCAT  145

seq1  ATATAGGCTATTCCTATACATCAAGATGTGTCACAGGAAAGCAACAGGTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGGCTATTCCTATACATCAAGATGTGTCACAGGAAAGCAACAGGTT  195

seq1  AGATTTACCTTAATGGCTTAC-AAATGCTGCTTTTGAAATTTGGGGTTCA  247
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGATTTACCTTAATGGCTTACAAAATGCTGCTTTTGAAATTTGGGGTTCA  245

seq1  TTTGTACATCAGTCAATCAATAGGAAAAGAAAATATCAAGCTTGCTCCAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACATCAGTCAATCAATAGGAAAAGAAAATATCAAGCTTGCTCCAT  295

seq1  ATTTCATCAAGTCAAACTTGTCTGCTTTACTGCTAAATAGCAGAGCTTTG  347
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATTTCATCAAGTCAAACTTGTCTGCTTTA-TGCTAAATAGCAGAGCTTTG  344

seq1  -AAGACCTAAGTGTTAAATCAATCACTTTGAAGATTAGAC-AAAGAAAGC  395
       ||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAAGACCTAAGTGTTAAATCAATCACTTTGAAGATTAGACAAAAGAAAGC  394

seq1  TAGGTAACTTATTGCCTTTCTCATATTTTATTATGCTATAAG-AAAGCTC  444
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TAGGTAACTTATTGCCTTTCTCATATTTTATTATGCTATAAGAAAAGCTC  444

seq1  TCAGATTTCCAGATATTTCTTTTGACCTTAATTTTAAATAAAAATTATGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTTCCAGATATTTCTTTTGACCTTAATTTTAAATAAAAATTATGT  494

seq1  TAGCTAATAACCATAAATCCATTCTGAAGATAGTGTCTGCTTCTGGAAAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAATAACCATAAATCCATTCTGAAGATAGTGTCTGCTTCTGGAAAG  544

seq1  CTGAGACATTAGATGACACATAAAATGTATACTACTGGCTTTTTGAGCTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACATTAGATGACACATAAAATGTATACTACTGGCTTTTTGAGCTG  594

seq1  TGCTCTTGCGGTCTTCATGAAATTCCTAGAGGATCCATCCACTCAGAACC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTGCGGTCTTCATGAAATTCCTAGAGGATCCATCCACTCAGAACC  644

seq1  ATGGGCTGGATCTTGGCTCTTACCTCTGGTCCTAACTAGGATATACTCAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTGGATCTTGGCTCTTACCTCTGGTCCTAACTAGGATATACTCAA  694

seq1  AGAATGTGATCATAAAGTTTCTACATATTAGAATGTCAATACTCTTTTTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTGATCATAAAGTTTCTACATATTAGAATGTCAATACTCTTTTTG  744

seq1  GCAGAAACTTTTAAAGGAGAAACAAAAGATTTTATAGCATCTTCCAAATG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAACTTTTAAAGGAGAAACAAAAGATTTTATAGCATCTTCCAAATG  794

seq1  TGGAAATTGTAGTACATAGATGTAAGGTATATGTTTTGAAGAAGCTACTT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATTGTAGTACATAGATGTAAGGTATATGTTTTGAAGAAGCTACTT  844

seq1  ATATGGATAATGATATATTAATGTACATAAATTCTTAATAATATCCAAAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGATAATGATATATTAATGTACATAAATTCTTAATAATATCCAAAA  894

seq1  TTTCCAGTGCTATCGTTGGGCATTTATAAAAGATTTATAACAGGTTGACA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGTGCTATCGTTGGGCATTTATAAAAGATTTATAACAGGTTGACA  944

seq1  TAAGTAAACAGGAGGAATAGTGGAACCAATGGAGGACAAGGTAGAATATA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAAACAGGAGGAATAGTGGAACCAATGGAGGACAAGGTAGAATATA  994

seq1  TGAGACTTTGTCCTTCTATCTGCCTTTCTTCTCTAAGAATTC  1036
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTTTGTCCTTCTATCTGCCTTTCTTCTCTAAGAATTC  1036