BAC Information

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BAC

Clone NameB6Ng01-072O12
Chromosome4 (Build37)
Map Location 64,776,587 - 64,906,532
singlet/doubletdoublet
Overlap genePappa
Upstream genenone
Downstream geneAstn2, Trim32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072O12.bB6Ng01-072O12.g
ACCDH890188DH890189
length6811,068
definitionDH890188|Mus musculus domesticus DNA, BAC clone: B6Ng01-072O12, 5' end.DH890189|Mus musculus domesticus DNA, BAC clone: B6Ng01-072O12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,905,852 - 64,906,532)(64,776,587 - 64,777,659)
sequence
gaattcctttctcctcccagagtccttctttttaaaactacacagttttt
taaaacaaaaacaacccaggattttaatcctagaagttagactccaaagg
cccttggggttcatctaactcatcctcaccacttgaggctgatgtgtgtg
ggaaggcctcgtgactttgaaaaaggtagcgaccagagccatttggtgtc
aggatccaatggtggggctcagaaccagccctgccacagatgcaccgtct
gcttctgcatcagtcaattctaggattcagggggaggaagaggatgagcc
caagagctgcactgaattaccctcagtacgctagagaattatgaccttgc
aaatgctgtctagttcccagaagggaaaactgagcctgggtggcagcaga
gaggtacccatggctacccagatagcagctttaggctccaagctccccag
tgcaaccaggacactgggatccacttgagtgctcttttctccttatgtta
aatgttagaaagcaatttggctattgtaattgggaaaagagaagacttga
gaaccaagggtcccatcactgagtcgtgtttttgttttgtttgcttttgt
ttctgtttcttcgtagtcgtgaatatggcatggcaaagacacaagcaagg
tgtgtgtgtgtgtgtgtgtgtgtgtatgtgt
gaattccatatttgccctgatttgaggatgcatcccaggatctgggaaaa
ctcggtataaagactgtcacaatttagatgactcatactaattgaccatt
ttaaacaaaccatattcttggtgccatctgactcattccctcctcaggga
aatgctaagcaatagaatttggtattaactgacctccttaaactaacgag
agacccacagcagctctgtctgacatgaccatggagtagcacttaaattc
aacttctgtgaaccaagtataggcactgagcactgctctccagcagtctc
ttcttggggttttgttaccttgtttcacgtgaagatgctaaaatggaccc
aaatcggtcaatccactcctggcttcctgtttcccctttgtcttctggag
gatgtcagtaccagttcagaaggataaatattgtgaatcgggacatgaac
atgaattaatattgcctctgagagcatacatataagaatgccccaggctg
ttttgataaagcatttgccaccatttgttatctgaagtctggctgaccaa
ggctgtcatgctgagaatcttacctaaccttggattacatttgtcctcaa
gatctagacatcgttctatactgtcctggagattgataggtaacgaatct
agactactgagaatggagggaaattaccattagcatatcctctagaagtc
attatgagattctcattggagtcagaagagttactgtccattccataaat
aagctgtgaaatttgtgtgtaaacctgagataatgttcagatgcattcaa
taactagaagatcagagaagctgtgagtcccagccttacagagaaaaata
agcctaaaacagcagttataccagggcattctttttagctctaaaccagg
ggataaacaatttctacctctatagttgtctcacagtcttaaagggaagg
tacactagatttaacagtagtagaatttagacagtaaaatagaacctgta
ttttgcctcttgcagattctcagcttagcacccactggaacactgtaaaa
tatatgcaagtatgaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_64905852_64906532
seq2: B6Ng01-072O12.b_46_726 (reverse)

seq1  ACACATACACACACACACACACACACACACACCTTGCTTGTGTCTTTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACACACACACACACACACACACACACCTTGCTTGTGTCTTTGCC  50

seq1  ATGCCATATTCACGACTACGAAGAAACAGAAACAAAAGCAAACAAAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCATATTCACGACTACGAAGAAACAGAAACAAAAGCAAACAAAACAA  100

seq1  AAACACGACTCAGTGATGGGACCCTTGGTTCTCAAGTCTTCTCTTTTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACGACTCAGTGATGGGACCCTTGGTTCTCAAGTCTTCTCTTTTCCC  150

seq1  AATTACAATAGCCAAATTGCTTTCTAACATTTAACATAAGGAGAAAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAATAGCCAAATTGCTTTCTAACATTTAACATAAGGAGAAAAGAG  200

seq1  CACTCAAGTGGATCCCAGTGTCCTGGTTGCACTGGGGAGCTTGGAGCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAAGTGGATCCCAGTGTCCTGGTTGCACTGGGGAGCTTGGAGCCTA  250

seq1  AAGCTGCTATCTGGGTAGCCATGGGTACCTCTCTGCTGCCACCCAGGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCTATCTGGGTAGCCATGGGTACCTCTCTGCTGCCACCCAGGCTC  300

seq1  AGTTTTCCCTTCTGGGAACTAGACAGCATTTGCAAGGTCATAATTCTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCCCTTCTGGGAACTAGACAGCATTTGCAAGGTCATAATTCTCTA  350

seq1  GCGTACTGAGGGTAATTCAGTGCAGCTCTTGGGCTCATCCTCTTCCTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTACTGAGGGTAATTCAGTGCAGCTCTTGGGCTCATCCTCTTCCTCCC  400

seq1  CCTGAATCCTAGAATTGACTGATGCAGAAGCAGACGGTGCATCTGTGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATCCTAGAATTGACTGATGCAGAAGCAGACGGTGCATCTGTGGCA  450

seq1  GGGCTGGTTCTGAGCCCCACCATTGGATCCTGACACCAAATGGCTCTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGTTCTGAGCCCCACCATTGGATCCTGACACCAAATGGCTCTGGT  500

seq1  CGCTACCTTTTTCAAAGTCACGAGGCCTTCCCACACACATCAGCCTCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTACCTTTTTCAAAGTCACGAGGCCTTCCCACACACATCAGCCTCAAG  550

seq1  TGGTGAGGATGAGTTAGATGAACCCCAAGGGCCTTTGGAGTCTAACTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGGATGAGTTAGATGAACCCCAAGGGCCTTTGGAGTCTAACTTCT  600

seq1  AGGATTAAAATCCTGGGTTGTTTTTGTTTTAAAAAACTGTGTAGTTTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTAAAATCCTGGGTTGTTTTTGTTTTAAAAAACTGTGTAGTTTTAA  650

seq1  AAAGAAGGACTCTGGGAGGAGAAAGGAATTC  681
      |||||||||||||||||||||||||||||||
seq2  AAAGAAGGACTCTGGGAGGAGAAAGGAATTC  681

seq1: chr4_64776587_64777659
seq2: B6Ng01-072O12.g_68_1135

seq1  GAATTCCATATTTGCCCTGATTTGAGGATGCATCCCAGGATCTGGGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATTTGCCCTGATTTGAGGATGCATCCCAGGATCTGGGAAAA  50

seq1  CTCGGTATAAAGACTGTCACAATTTAGATGACTCATACTAATTGACCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGTATAAAGACTGTCACAATTTAGATGACTCATACTAATTGACCATT  100

seq1  TTAAACAAACCATATTCTTGGTGCCATCTGACTCATTCCCTCCTCAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAAACCATATTCTTGGTGCCATCTGACTCATTCCCTCCTCAGGGA  150

seq1  AATGCTAAGCAATAGAATTTGGTATTAACTGACCTCCTTAAACTAACGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAAGCAATAGAATTTGGTATTAACTGACCTCCTTAAACTAACGAG  200

seq1  AGACCCACAGCAGCTCTGTCTGACATGACCATGGAGTAGCACTTAAATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCACAGCAGCTCTGTCTGACATGACCATGGAGTAGCACTTAAATTC  250

seq1  AACTTCTGTGAACCAAGTATAGGCACTGAGCACTGCTCTCCAGCAGTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTGTGAACCAAGTATAGGCACTGAGCACTGCTCTCCAGCAGTCTC  300

seq1  TTCTTGGGGTTTTGTTACCTTGTTTCACGTGAAGATGCTAAAATGGACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGGGTTTTGTTACCTTGTTTCACGTGAAGATGCTAAAATGGACCC  350

seq1  AAATCGGTCAATCCACTCCTGGCTTCCTGTTTCCCCTTTGTCTTCTGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCGGTCAATCCACTCCTGGCTTCCTGTTTCCCCTTTGTCTTCTGGAG  400

seq1  GATGTCAGTACCAGTTCAGAAGGATAAATATTGTGAATCGGGACATGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCAGTACCAGTTCAGAAGGATAAATATTGTGAATCGGGACATGAAC  450

seq1  ATGAATTAATATTGCCTCTGAGAGCATACATATAAGAATGCCCCAGGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTAATATTGCCTCTGAGAGCATACATATAAGAATGCCCCAGGCTG  500

seq1  TTTTGATAAAGCATTTGCCACCATTTGTTATCTGAAGTCTGGCTGACCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATAAAGCATTTGCCACCATTTGTTATCTGAAGTCTGGCTGACCAA  550

seq1  GGCTGTCATGCTGAGAATCTTACCTAACCTTGGATTACATTTGTCCTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTCATGCTGAGAATCTTACCTAACCTTGGATTACATTTGTCCTCAA  600

seq1  GATCTAGACATCGTTCTATACTGTCCTGGAGATTGATAGGTAACGAATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAGACATCGTTCTATACTGTCCTGGAGATTGATAGGTAACGAATCT  650

seq1  AGACTACTGAGAATGGAGGGAAATTACCATTAGCATATCCTCTAGAAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTACTGAGAATGGAGGGAAATTACCATTAGCATATCCTCTAGAAGTC  700

seq1  ATTATGAGATTCTCATTGGAGTCAGAAGAGTTACTGTCCATTCCATAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGAGATTCTCATTGGAGTCAGAAGAGTTACTGTCCATTCCATAAAT  750

seq1  AAGCTGTGAAATTTGTGTGTAAACCTGAGATAATGTTCAGATGCATTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTGAAATTTGTGTGTAAACCTGAGATAATGTTCAGATGCATTCAA  800

seq1  TAACTAGAAGATCAGAGAAGCTGTGAGTCCCAGCCTTACAGAGAAAAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAGAAGATCAGAGAAGCTGTGAGTCCCAGCCTTACAGAGAAAAATA  850

seq1  AGCCTAAAACAGCAGTTATACCAGGGCATTCTTTTTAGCTCTAAAACCAG  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGCCTAAAACAGCAGTTATACCAGGGCATTCTTTTTAGCTCT-AAACCAG  899

seq1  GGGATAAACAATTTTCTACCTCTATAGTTGTCTCACAGTCTTAAAAGGGA  950
      ||||||||||| |||||||||||||||||||||||||||||| |||||||
seq2  GGGATAAACAA-TTTCTACCTCTATAGTTGTCTCACAGTCTT-AAAGGGA  947

seq1  AGGTAACACTAGAATTAAACAGTAGTAAGAATATAGACAAGTAAAATAGA  1000
      |||| ||||||| ||| ||||||||| ||||| ||||| |||||||||||
seq2  AGGT-ACACTAG-ATTTAACAGTAGT-AGAATTTAGAC-AGTAAAATAGA  993

seq1  ACCTGTA-TTTGCCTCTTGCAAGATCTCAGCTTAGCACACACT-GAACAC  1048
      ||||||| |||||||||||||   |||||||||||||| |||| ||||||
seq2  ACCTGTATTTTGCCTCTTGCAGATTCTCAGCTTAGCACCCACTGGAACAC  1043

seq1  TGTAAAATATATGCAAGTATGAATT  1073
      ||||||||||||||||||||||| |
seq2  TGTAAAATATATGCAAGTATGAAAT  1068