BAC Information

Click to search

BAC

Clone NameB6Ng01-073E19
Chromosome4 (Build37)
Map Location 85,181,004 - 85,362,449
singlet/doubletdoublet
Overlap geneA930009N24
Upstream geneBnc2, LOC100040660, LOC624465, LOC100040284, D530005L17Rik, LOC622811, LOC100040303, Sh3gl2
Downstream geneLOC668052, Adamtsl1, 4930500O09Rik, Rraga, 6230416J20Rik, LOC100040388, Adfp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073E19.bB6Ng01-073E19.g
ACCDH890472DH890473
length1,116975
definitionDH890472|Mus musculus domesticus DNA, BAC clone: B6Ng01-073E19, 5' end.DH890473|Mus musculus domesticus DNA, BAC clone: B6Ng01-073E19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,361,330 - 85,362,449)(85,181,004 - 85,181,949)
sequence
gaattcttcttgatgaaatctttgatattcatacacatatgctgtcttta
gtgcaggattcccatcttgtcctttcattttgagatcattgctgctcaag
tatactcctttctgctatctgactctgtatctgtaggctcaagaaaggtt
ggatcatttaaattttttctatacggaaagatttagcacaaaatttgttg
ggttaaacatattttctagaatcaatctcttcggcttgttcaaatgtttg
gtttgtgtagctgtgtctatagttgcttttccttattctgggaaatcatt
agtgttcagttggcaaccccaacttcaccaaaactgttgtcctaagatat
ttttcaatagaaattcaatgaatttgccttaatgcaattcctagacctca
caatggcatgtgtaaatttctcttccctttgacaccacgattttctacct
tttttcatgatcttctctcacattctggcatttattatgagttttaatct
atttcaagttcctgttcaattcttggatgttgtgatgcttgctttttcat
tctgtttgggctaaggagtaatcttagcatccccaccctgtgaatttcag
agaggtagtgtctctgatcctggctttcttacacacgtagcataacaata
aaatctgtatcagaggtgtgagttagaactaaaaaaaatgtcaaatttat
tcatatttatgatatagtgtgaatataatttaatatgaagaatgtacaat
agagttaatattagtcagtactgagaacagtgattagcatatagcaaaag
caagagctaatattttgttcgttctcatggttttggtgaacaccttcaca
ctgttattttccagatccactttttttttcaatcaaaagctctctagaac
ctacacatctgttgagtttagttattaaatcatccttcaagggctgtttc
ccagccatccctgtcattgcttaatgggccacatgatcaaagtggccatg
tgtgtcgagaatggaggtatgctttgggctcagcaacatggcttcactcc
acaagcttgactggcttacgctgcagctgaatgcagattcgtcacataca
gaatcaacactgagcc
gaattccagtgcctcattttcagaccccccactcccaaaagccacataaa
atccactgctaaggaactgcaagacactaagcttagctctccattctcac
gtctattctgagggttcagtgaggagaaatacatttcccttaaatatggg
aatggttttcattttgactatagtgatctaagtagtcagataattgttat
ccaaattgtgggttttctttgtattaagacatatgtaaggagtctatgag
gttggtggaattccttaaggcttagaacccaggaaacatcctatactgga
agctgaaattgatatttttccaccattacagagcaagtagttttagttct
tattttctggaatttaaacatcatttctgtcagtttaatcacaaaggatt
cgtactttctgaggacaggaccaaatccaattaattctttgaatcaaagt
atgctgagcctggtgtggcccaggtagggacacagtgacatggttcctgc
ccctgggacaaggcccccatgtgagccttcacgagtgtcaatgactgctg
tgggtataaggtttgtttgggtaataatgtacatattttcacatttctca
gagcaatgttctctctcttaatgttaatgactccatgataatttgacaca
tcatgagcccaggcgtgaaaggcatggctaatgtctcagcagaatgataa
acaatggtaaaaacatgagttcgaaatatgtaattttctcaactatgcaa
aatataaggatgtaatatgaattatgaggggcttccagaatctaaagaaa
cactgtgatctggcttatcagaagatacaaaagcaggcccattcttgagt
tcaaggtcagcctaggagaaagcccaggtgtggtagaaatggtaatttca
ggctagggtccacccaactagttattgtttgtgcttagtaaaggacacag
atcgctgattcttggcaatgtaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_85361330_85362449
seq2: B6Ng01-073E19.b_43_1158 (reverse)

seq1  GGCTCAGTGTTGGTTTCTGCTGTTGGCAGATCTGGCAATCAGCAGCAGCT  50
      ||||||||||| | |||||    || |  |||| ||| ||||| ||||| 
seq2  GGCTCAGTGTT-GATTCTGTATGTGACGAATCT-GCATTCAGCTGCAGCG  48

seq1  GTAGCCAGGTCAGCCTTGGTGAGTGGAAGCCCATGTTGCTGAGCCC-AAG  99
        ||||| ||||  ||||  |||| |||| |||||||||||||||| |||
seq2  TAAGCCA-GTCAAGCTTGTGGAGT-GAAG-CCATGTTGCTGAGCCCAAAG  95

seq1  CATAACCTCCA-TCTCGACCACCATGGCCACTTTGTTCATGT-GCCCATT  147
      ||| ||||||| |||||||   ||||||||||||| |||||| |||||||
seq2  CAT-ACCTCCATTCTCGACACACATGGCCACTTTGATCATGTGGCCCATT  144

seq1  GAGCAATGACAGGGATGGCTGGGGAAACAGCCCTTGAGGGATGATTTAAT  197
       ||||||||||||||||||| |||||||||||||||| ||||||||||||
seq2  AAGCAATGACAGGGATGGCT-GGGAAACAGCCCTTGAAGGATGATTTAAT  193

seq1  ATCTAAACTACAACAGATGTGTAGGTTCTAGAGAGCTTTTGATTGAAAAA  247
      | ||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAACT-CAACAGATGTGTAGGTTCTAGAGAGCTTTTGATTGAAAAA  242

seq1  AAAAGTGGATCTGGAAAATTAACAGTGTGAAGGTGTTCACCAAAACCATG  297
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAAAGTGGATCTGGAAAA-TAACAGTGTGAAGGTGTTCACCAAAACCATG  291

seq1  AGAACGAACAAAATATTAGCTCTTGCTTTTGCTATATGCTAATCACTGTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACGAACAAAATATTAGCTCTTGCTTTTGCTATATGCTAATCACTGTT  341

seq1  CTCAGTACTGACTAATATTAACTCTATTGTACATTCTTCATATT-AATTA  396
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTCAGTACTGACTAATATTAACTCTATTGTACATTCTTCATATTAAATTA  391

seq1  TATTCACACTATATCATAAATATGAATAAATTTGACA-TTTTTTTAGTTC  445
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TATTCACACTATATCATAAATATGAATAAATTTGACATTTTTTTTAGTTC  441

seq1  TAACTCACACCTCTGATACAGATTTTATTGTTATGCTACGTGTGTAAGAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCACACCTCTGATACAGATTTTATTGTTATGCTACGTGTGTAAGAA  491

seq1  AGCCAGGATCAGAGACACTACCTCTCTGAAATTCACAGGGTGGGGATGCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGATCAGAGACACTACCTCTCTGAAATTCACAGGGTGGGGATGCT  541

seq1  AAGATTACTCCTTAGCCCAAACAGAATGAAAAAGCAAGCATCACAACATC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTACTCCTTAGCCCAAACAGAATGAAAAAGCAAGCATCACAACATC  591

seq1  CAAGAATTGAACAGGAACTTGAAATAGATTAAAACTCATAATAAATGCCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATTGAACAGGAACTTGAAATAGATTAAAACTCATAATAAATGCCA  641

seq1  GAATGTGAGAGAAGATCATGAAAAAAGGTAGAAAATCGTGGTGTCAAAGG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGAGAGAAGATCATGAAAAAAGGTAGAAAATCGTGGTGTCAAAGG  691

seq1  GAAGAGAAATTTACACATGCCATTGTGAGGTCTAGGAATTGCATTAAGGC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAAATTTACACATGCCATTGTGAGGTCTAGGAATTGCATTAAGGC  741

seq1  AAATTCATTGAATTTCTATTGAAAAATATCTTAGGACAACAGTTTTGGTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATTGAATTTCTATTGAAAAATATCTTAGGACAACAGTTTTGGTG  791

seq1  AAGTTGGGGTTGCCAACTGAACACTAATGATTTCCCAGAATAAGGAAAAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGGGGTTGCCAACTGAACACTAATGATTTCCCAGAATAAGGAAAAG  841

seq1  CAACTATAGACACAGCTACACAAACCAAACATTTGAACAAGCCGAAGAGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTATAGACACAGCTACACAAACCAAACATTTGAACAAGCCGAAGAGA  891

seq1  TTGATTCTAGAAAATATGTTTAACCCAACAAATTTTGTGCTAAATCTTTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCTAGAAAATATGTTTAACCCAACAAATTTTGTGCTAAATCTTTC  941

seq1  CGTATAGAAAAAATTTAAATGATCCAACCTTTCTTGAGCCTACAGATACA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATAGAAAAAATTTAAATGATCCAACCTTTCTTGAGCCTACAGATACA  991

seq1  GAGTCAGATAGCAGAAAGGAGTATACTTGAGCAGCAATGATCTCAAAATG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGATAGCAGAAAGGAGTATACTTGAGCAGCAATGATCTCAAAATG  1041

seq1  AAAGGACAAGATGGGAATCCTGCACTAAAGACAGCATATGTGTATGAATA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACAAGATGGGAATCCTGCACTAAAGACAGCATATGTGTATGAATA  1091

seq1  TCAAAGATTTCATCAAGAAGAATTC  1120
      |||||||||||||||||||||||||
seq2  TCAAAGATTTCATCAAGAAGAATTC  1116

seq1: chr4_85181004_85181949
seq2: B6Ng01-073E19.g_71_1014

seq1  GAATTCCAGTGCCTCATTTTCAGACCCCCCACTCCCAAAAGCCACATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTGCCTCATTTTCAGACCCCCCACTCCCAAAAGCCACATAAA  50

seq1  ATCCACTGCTAAGGAACTGCAAGACACTAAGCTTAGCTCTCCATTCTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTGCTAAGGAACTGCAAGACACTAAGCTTAGCTCTCCATTCTCAC  100

seq1  GTCTATTCTGAGGGTTCAGTGAGGAGAAATACATTTCCCTTAAATATGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTCTGAGGGTTCAGTGAGGAGAAATACATTTCCCTTAAATATGGG  150

seq1  AATGGTTTTCATTTTGACTATAGTGATCTAAGTAGTCAGATAATTGTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTTTCATTTTGACTATAGTGATCTAAGTAGTCAGATAATTGTTAT  200

seq1  CCAAATTGTGGGTTTTCTTTGTATTAAGACATATGTAAGGAGTCTATGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTGTGGGTTTTCTTTGTATTAAGACATATGTAAGGAGTCTATGAG  250

seq1  GTTGGTGGAATTCCTTAAGGCTTAGAACCCAGGAAACATCCTATACTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTGGAATTCCTTAAGGCTTAGAACCCAGGAAACATCCTATACTGGA  300

seq1  AGCTGAAATTGATATTTTTCCACCATTACAGAGCAAGTAGTTTTAGTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAATTGATATTTTTCCACCATTACAGAGCAAGTAGTTTTAGTTCT  350

seq1  TATTTTCTGGAATTTAAACATCATTTCTGTCAGTTTAATCACAAAGGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTGGAATTTAAACATCATTTCTGTCAGTTTAATCACAAAGGATT  400

seq1  CGTACTTTCTGAGGACAGGACCAAATCCAATTAATTCTTTGAATCAAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACTTTCTGAGGACAGGACCAAATCCAATTAATTCTTTGAATCAAAGT  450

seq1  ATGCTGAGCCTGGTGTGGCCCAGGTAGGGACACAGTGACATGGTTCCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAGCCTGGTGTGGCCCAGGTAGGGACACAGTGACATGGTTCCTGC  500

seq1  CCCTGGGACAAGGCCCCCATGTGAGCCTTCACGAGTGTCAATGACTGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGACAAGGCCCCCATGTGAGCCTTCACGAGTGTCAATGACTGCTG  550

seq1  TGGGTATAAGGTTTGTTTGGGTAATAATGTACATATTTTCACATTTCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTATAAGGTTTGTTTGGGTAATAATGTACATATTTTCACATTTCTCA  600

seq1  GAGCAATGTTCTCTCTCTTAATGTTAATGACTCCATGATAATTTGACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATGTTCTCTCTCTTAATGTTAATGACTCCATGATAATTTGACACA  650

seq1  TCATGAGCCCAGGCGTGAAAGGCATGGCTAATGTCTCAGCAGAATGATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAGCCCAGGCGTGAAAGGCATGGCTAATGTCTCAGCAGAATGATAA  700

seq1  ACAATGGTAAAAACATGAGTTCGAAATATGTAA-TTTCTCAACTATGCAA  749
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACAATGGTAAAAACATGAGTTCGAAATATGTAATTTTCTCAACTATGCAA  750

seq1  AATATAAGGATGTAATATGAATTATGAGGGGCTTCCAGAATCTAAAGAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAGGATGTAATATGAATTATGAGGGGCTTCCAGAATCTAAAGAAA  800

seq1  CACTGTGATCTGGCTTATCAGAAAGATACAAAAGCAGGCCCATTCCTGAG  849
      ||||||||||||||||||||| ||||||||||||||||||||||| ||||
seq2  CACTGTGATCTGGCTTATCAG-AAGATACAAAAGCAGGCCCATTCTTGAG  849

seq1  TTCAAGGTCAGCCTAGGAGAAAGCCCAGGTGTGGTAGAAATGGTAATTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGTCAGCCTAGGAGAAAGCCCAGGTGTGGTAGAAATGGTAATTTC  899

seq1  AGGCCAGGGTTCCACCCAACTAGTTTATTGTTTGTGCTTAGTAAAGG  946
      |||| |||| ||||||||||||| |||||||||||||||||||||||
seq2  AGGCTAGGG-TCCACCCAACTAG-TTATTGTTTGTGCTTAGTAAAGG  944