BAC Information

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BAC

Clone NameB6Ng01-073O01
Chromosome4 (Build37)
Map Location 31,933,689 - 32,042,198
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040891
Downstream geneMap3k7, LOC665218, LOC665228, LOC665232, Bach2, Gja10, Casp8ap2, Mdn1, Lyrm2, Ankrd6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073O01.bB6Ng01-073O01.g
ACCDH890877DH890878
length8451,066
definitionDH890877|Mus musculus domesticus DNA, BAC clone: B6Ng01-073O01, 5' end.DH890878|Mus musculus domesticus DNA, BAC clone: B6Ng01-073O01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,933,689 - 31,934,301)(32,041,131 - 32,042,198)
sequence
gaattcttctgctattctcttctatcatcatttactgtgctattaaaggt
caacacctcaggaccaagtggccattgaccaaaatctctgaaactataag
ccatacataaaactctggtggtttgaatgagcctggccccgaagggtcat
atatctgataccaatttgcagaactatttgggaaggtttaggaggtatgg
ctttattggaagagggactggtgtctctgagggtaggctttgaggatcca
aaattccaggccattaccagttagctttctctgtgtattcctctgcctgt
ggttgtagattaagatgtgagcgctcaagtattccttcagtccttcattc
tgacacaatggactctaacccactgaaactgtaagctaaattaaccattt
cctttttataagttaccttggtcatactgttttatcacagcaatagaaaa
acaactaagacagaagttggtgccaagcagtgtgctattgctgggacagg
cctgaacatactgctttcttggaggaatgtggaaaacgtggggacttgaa
actttggacttggaaagtggccctccactataaccagggctcagtgagtc
atgctaatagaagcttggaagactaaagtgttgaaacaaatgtggattat
ggaggcacagatccagaggcatcataggggaaaggatattagcaactgtg
ctagaatctattcttgtaatatttttgacaaaggatgtggatgcttttct
gctttttgtcctaataattttccctgaagctatattttaaaattaatggc
caactttccttagtgtaggatatttcaagacaggctgatttgact
gaattctcctccactgaaacgtattgagctggtccaagaaatatttctgg
aaccagcacaatttagccgcgggactgtaataggacatggaatcagcaga
caccttagacttgagatgccgttcaatctaagaatgtgaaagactcagca
ggcaaaacgagaaagacgcctctgctttggaactttgaggcgtttttctg
ccttacattttaattggctgtttaactttgtattaaacaaaactgtgatg
gttaagaattcttcttattctgatcctttagagctaagaaaacgaagttt
gtgactgtatgcctcttacagagaaaagtcctgcatcaaagctacttcat
caaaatgaactttaagaaatataaccctgtgcagaactcaagggggctgc
tgtggttgttctcatgtgtctgtttctggacagctcagtcctaagtcatg
tatttattccttcagcaggcatcatttgctgtatatacacagtaatagtt
agcatacagtagtcttcttaaatatgagttattcagcctggcgctaaaaa
gaagttagcagttacgttttctcagattttctggttttactttaagacag
catccctgatataatgacatgataattgtcatgacttgtctgctctagga
gacaaccaagtgttcaacatttacgtctgcagattctgttttttattttt
tatatgttggtttgactttctaggccagtatgctggccacatttatatca
acttgacacaaactgtagccatctgagaggaggaaacctccattgagaaa
atgcctccgtaaaatcagtctctgtgccagagcatgttctttacttagtt
gactgatgggggagaccccagcctcttgtggcgggtcatcctggactggt
ggttcttggttctattaagaagcaggctgaccaggcataaggagcaagcc
agcaagcagcactccttcatggcctctgcatcagctcctgtctcaggttc
ctgctctgttgaattcctgccttgacttccctaggaaggactgtcatctg
aaatgtatgctgtaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_31933689_31934301
seq2: B6Ng01-073O01.b_37_649

seq1  GAATTCTTCTGCTATTCTCTTCTATCATCATTTACTGTGCTATTAAAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGCTATTCTCTTCTATCATCATTTACTGTGCTATTAAAGGT  50

seq1  CAACACCTCAGGACCAAGTGGCCATTGACCAAAATCTCTGAAACTATAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACCTCAGGACCAAGTGGCCATTGACCAAAATCTCTGAAACTATAAG  100

seq1  CCATACATAAAACTCTGGTGGTTTGAATGAGCCTGGCCCCGAAGGGTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACATAAAACTCTGGTGGTTTGAATGAGCCTGGCCCCGAAGGGTCAT  150

seq1  ATATCTGATACCAATTTGCAGAACTATTTGGGAAGGTTTAGGAGGTATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGATACCAATTTGCAGAACTATTTGGGAAGGTTTAGGAGGTATGG  200

seq1  CTTTATTGGAAGAGGGACTGGTGTCTCTGAGGGTAGGCTTTGAGGATCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTGGAAGAGGGACTGGTGTCTCTGAGGGTAGGCTTTGAGGATCCA  250

seq1  AAATTCCAGGCCATTACCAGTTAGCTTTCTCTGTGTATTCCTCTGCCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCAGGCCATTACCAGTTAGCTTTCTCTGTGTATTCCTCTGCCTGT  300

seq1  GGTTGTAGATTAAGATGTGAGCGCTCAAGTATTCCTTCAGTCCTTCATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTAGATTAAGATGTGAGCGCTCAAGTATTCCTTCAGTCCTTCATTC  350

seq1  TGACACAATGGACTCTAACCCACTGAAACTGTAAGCTAAATTAACCATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACAATGGACTCTAACCCACTGAAACTGTAAGCTAAATTAACCATTT  400

seq1  CCTTTTTATAAGTTACCTTGGTCATACTGTTTTATCACAGCAATAGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTATAAGTTACCTTGGTCATACTGTTTTATCACAGCAATAGAAAA  450

seq1  ACAACTAAGACAGAAGTTGGTGCCAAGCAGTGTGCTATTGCTGGGACAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTAAGACAGAAGTTGGTGCCAAGCAGTGTGCTATTGCTGGGACAGG  500

seq1  CCTGAACATACTGCTTTCTTGGAGGAATGTGGAAAACGTGGGGACTTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAACATACTGCTTTCTTGGAGGAATGTGGAAAACGTGGGGACTTGAA  550

seq1  ACTTTGGACTTGGAAAGTGGCCCTCCACTATAACCAGGGCTCAGTGAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGACTTGGAAAGTGGCCCTCCACTATAACCAGGGCTCAGTGAGTC  600

seq1  ATGCTAATAGAAG  613
      |||||||||||||
seq2  ATGCTAATAGAAG  613

seq1: chr4_32041131_32042198
seq2: B6Ng01-073O01.g_69_1134 (reverse)

seq1  ATTTCAGCTTACACTTCAGGATGACAGTCCATCACTGAGGGAAGTCAAGG  50
      ||| |||| |||| |||| ||||||||||| || || |||||||||||||
seq2  ATTACAGCATACATTTCA-GATGACAGTCCTTC-CT-AGGGAAGTCAAGG  47

seq1  CAGGAATTCAAACAGAGCAGGAACCTGGAGACAGGAGCTGATGCAGAGGC  100
      ||||||||| |||||||||||||||| |||||||||||||||||||||||
seq2  CAGGAATTC-AACAGAGCAGGAACCT-GAGACAGGAGCTGATGCAGAGGC  95

seq1  CATGGAGGAGTGCTGCTTGCTGGCTTGCTCCCTATGGCTTGCTCAGCCTG  150
      |||| |||||||||||||||||||||||||| ||| || || ||||||||
seq2  CATGAAGGAGTGCTGCTTGCTGGCTTGCTCCTTAT-GCCTGGTCAGCCTG  144

seq1  CTTCCTTATAGAACCCAGAACCACCAGTCCAGGATGACCCGCCACAAGAG  200
      |||| | |||||||| ||||||||||||||||||||||||||||||||||
seq2  CTTCTTAATAGAACCAAGAACCACCAGTCCAGGATGACCCGCCACAAGAG  194

seq1  GCTGGGGTCTCCCCCATCAGTC-ACTAAGT-AAGAACATGCTCTGGCACA  248
      |||||||||||||||||||||| ||||||| |||||||||||||||||||
seq2  GCTGGGGTCTCCCCCATCAGTCAACTAAGTAAAGAACATGCTCTGGCACA  244

seq1  GAGACTGATTTTACGGAGGCATTTTCTCAATGGAGGTTTCCTCCTCTCAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGATTTTACGGAGGCATTTTCTCAATGGAGGTTTCCTCCTCTCAG  294

seq1  ATGGCTACAGTTTGTGTCAAGTTGATATAAATGTGGCCAGCATACTGGCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTACAGTTTGTGTCAAGTTGATATAAATGTGGCCAGCATACTGGCC  344

seq1  TAGAAAGTCAAACCAACATATAAAAA--TAAAAACAGAATCTGCAGACGT  396
      ||||||||||||||||||||||||||   |||||||||||||||||||||
seq2  TAGAAAGTCAAACCAACATATAAAAAATAAAAAACAGAATCTGCAGACGT  394

seq1  AAATGTTGAACACTTGGTTGTCTCCTAGAGCAGACAAGTCATGACAATTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTGAACACTTGGTTGTCTCCTAGAGCAGACAAGTCATGACAATTA  444

seq1  TCATGTCATTATATCAGGGATGCTGTCTTAAAGTAAAACCAGAAAATCTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCATTATATCAGGGATGCTGTCTTAAAGTAAAACCAGAAAATCTG  494

seq1  AGAAAACGTAACTGCTAACTTCTTTTTAGCGCCAGGCTGAATAACTCATA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACGTAACTGCTAACTTCTTTTTAGCGCCAGGCTGAATAACTCATA  544

seq1  TTTAAGAAGACTACTGTATGCTAACTATTACTGTGTATATACAGCAAATG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAAGACTACTGTATGCTAACTATTACTGTGTATATACAGCAAATG  594

seq1  ATGCCTGCTGAAGGAATAAATACATGACTTAGGACTGAGCTGTCCAGAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTGCTGAAGGAATAAATACATGACTTAGGACTGAGCTGTCCAGAAA  644

seq1  CAGACACATGAGAACAACCACAGCAGCCCCCTTGAGTTCTGCACAGGGTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACATGAGAACAACCACAGCAGCCCCCTTGAGTTCTGCACAGGGTT  694

seq1  ATATTTCTTAAAGTTCATTTTGATGAAGTAGCTTTGATGCAGGACTTTTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCTTAAAGTTCATTTTGATGAAGTAGCTTTGATGCAGGACTTTTC  744

seq1  TCTGTAAGAGGCATACAGTCACAAACTTCGTTTTCTTAGCTCTAAAGGAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAGAGGCATACAGTCACAAACTTCGTTTTCTTAGCTCTAAAGGAT  794

seq1  CAGAATAAGAAGAATTCTTAACCATCACAGTTTTGTTTAATACAAAGTTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATAAGAAGAATTCTTAACCATCACAGTTTTGTTTAATACAAAGTTA  844

seq1  AACAGCCAATTAAAATGTAAGGCAGAAAAACGCCTCAAAGTTCCAAAGCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCAATTAAAATGTAAGGCAGAAAAACGCCTCAAAGTTCCAAAGCA  894

seq1  GAGGCGTCTTTCTCGTTTTGCCTGCTGAGTCTTTCACATTCTTAGATTGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCGTCTTTCTCGTTTTGCCTGCTGAGTCTTTCACATTCTTAGATTGA  944

seq1  ACGGCATCTCAAGTCTAAGGTGTCTGCTGATTCCATGTCCTATTACAGTC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCATCTCAAGTCTAAGGTGTCTGCTGATTCCATGTCCTATTACAGTC  994

seq1  CCGCGGCTAAATTGTGCTGGTTCCAGAAATATTTCTTGGACCAGCTCAAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCGGCTAAATTGTGCTGGTTCCAGAAATATTTCTTGGACCAGCTCAAT  1044

seq1  ACGTTTCAGTGGAGGAGAATTC  1068
      ||||||||||||||||||||||
seq2  ACGTTTCAGTGGAGGAGAATTC  1066