BAC Information

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BAC

Clone NameB6Ng01-074F02
Chromosome4 (Build37)4 (Build37)
Map Location 146,128,745 - 146,129,555147,121,982 - 147,122,661
singlet/doubletsingletsinglet
Overlap geneOTTMUSG00000010694
Upstream geneLOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846
Downstream geneLOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074F02.bB6Ng01-074F02.g
ACCDH891199DH891200
length1,007993
definitionDH891199|Mus musculus domesticus DNA, BAC clone: B6Ng01-074F02, 5' end.DH891200|Mus musculus domesticus DNA, BAC clone: B6Ng01-074F02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(146,128,745 - 146,129,555)(147,121,982 - 147,122,661)
sequence
gaattcttctaatcctccaaggttctgcccagcatgctgtgaaaggatga
ctctaggctaagatatttttataaatagaaaacttactatggattaggac
aaaattaaacagcacctttgaaataattatgattgctcactttcttaaga
aaaatgactccttgtttcatgaaaagcactttgcccatacacattcatgg
tttgttgagtgctgcactgtggacttcttgcaggtgtggtaatgcttaga
ccctgcattcagggtttttttcagcaatctcttgttggagaagttcaaca
gtttggatcctgcgtgtcacaatagttttcttacattcttccttgttcct
cagtgtttctgggaaaaggactctgtgtgttaactgtgtgactgactcaa
gagtaaactgaaatcctcagggaaaaagagacattctcatgacatcttct
ctttccttcatgtttatcctttaacctggtgttgacatctttcatttttg
tcacatgaaaaggtccaggtttttttgaatgattttcccattttcaggtc
ttcattttctcagccaaatctgcataaatataaatcaaatctaagagccc
tagatggtaaaggccaaggagactctattgaaggatccaggtgtgttagc
agctttgaaaaggggtggggtggggctcacctgccagtacaaagaggaca
tgaatttggttttgccagcttctgtttcattaatgattctgaaagatttc
actaagaatattagatgtgacgatatggatttcccatggtaggtagtgct
gtcagctgttgaaagacccacaacgtgaggactcccccacgttctgactc
aggagaggcgacaccccaaaatcacccacaagaaacgggtcttgctgcaa
attgcaagaggatttttattcaagagcgctctcgggcccatggtcataca
ccacgcagggtagaggactgtggcgccccgagtagctgggtaaggggtat
ttaaatg
gaattctctatcagaagaaaaggctgtcgactgtcctcaagtctctttcg
tacagtatcagacgttctagctcaagcaataaggcaactaaaagagatca
aggggatatttatatttatatcagacagttcatacatttcaggtacaaac
ttaatacagagtgtttcgctgcttaataaatgtttatatcttcaaggctt
ttccccactttctcctctataagtttcagtgtctcctgttttatgtggag
ttccttgatctacatacacttgaccttagtacaaggagataagaatggat
taattcacattcttctacatgttaatggccagttgtgccagcaccatttg
ttgaaaatgctgtcttttttttctttttgtcaattctcgaacttacagca
caagccattgctgttctattcaggaatttttctcctgtgcccatatcttt
gaggcttttccccactttctcctctataagtttcactgtctatggtttta
tgtggagttccttgatccacttagatttgaccttagtacaaggagatagg
aatggatcaattcgcattcttctacatgttaaccgccagttgtgccagca
ccatttgttgaaaatgccgtctttttttccactggatggttttagctccc
ttttcaaaggtcaagtgaccattggtgtgtgggttcatttctgggtcttc
aattctattccattggtctacttgtcagtcgctataccagtaccttgcag
tttttatcacaattgctctgtactacatctttaggtcaggcatggtgatt
ccatcaaagattcttttatcatttaggagagtttttgctatgctaggttt
tttgttattccagatgaatttgcagaatgtctttcctaattcgttgaagt
tgatattttgagtagtgagttggaattttgctggggattgcattgactct
gatgctttcagcatgacaagccatttttactatattatcctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146128745_146129555
seq2: B6Ng01-074F02.b_45_853

seq1  GAATTCTTCTAATCCTCCAAGGTTCTGCCCAGCATGCTGTGAAAGGATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTAATCCTCCAAGGTTCTGCCCAGCATGCTGTGAAAGGATGA  50

seq1  CTCTAGGCTAAGATATTTTTATAAATAGAAAACTTACTATGGATTAGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGCTAAGATATTTTTATAAATAGAAAACTTACTATGGATTAGGAC  100

seq1  AAAATTAAACAGCACCTTTGAAATAATTATGATTGCTCACTTTCTTAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAACAGCACCTTTGAAATAATTATGATTGCTCACTTTCTTAAGA  150

seq1  AAAATGACTCCTTGTTTCATGAAAAGCACTTTGCCCATACACATTCATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGACTCCTTGTTTCATGAAAAGCACTTTGCCCATACACATTCATGG  200

seq1  TTTGTTGAGTGCTGCACTGTGGAGTTCTTGCAGGTGTGGTAATGCTTAGA  250
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTTGTTGAGTGCTGCACTGTGGACTTCTTGCAGGTGTGGTAATGCTTAGA  250

seq1  CCCTGCATTCAGGGTTTTTTTCAGCAATCTCTTGTTGGAGAAGTTCAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCATTCAGGGTTTTTTTCAGCAATCTCTTGTTGGAGAAGTTCAACA  300

seq1  GTTTGGATCCTGCGTGTCACAATAGTTTTCTTACATTCTTCCTTGTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTTTGGATCCTGCGTGTCACAATAGTTTTCTTACATTCTTCCTTGTTCCT  350

seq1  CAGTGATTCTGGGAAAAGGACTCTCTGTGTGTTAACTGTGTGACTGACTC  400
      ||||| ||||||||||||||  ||||||||||||||||||||||||||||
seq2  CAGTGTTTCTGGGAAAAGGA--CTCTGTGTGTTAACTGTGTGACTGACTC  398

seq1  AAGAGTAAACTGAAATCCTCAGGGAAAAAGAGACATTCTCATGACATCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAAACTGAAATCCTCAGGGAAAAAGAGACATTCTCATGACATCTT  448

seq1  CTCTTTCCTTCATGTTTATCCTTTCACCTGGTGTTGGCATCTTTCATTTT  500
      |||||||||||||||||||||||| ||||||||||| |||||||||||||
seq2  CTCTTTCCTTCATGTTTATCCTTTAACCTGGTGTTGACATCTTTCATTTT  498

seq1  TGTCACATGAAAAGGTCCAGGTTTTTTTGAATGATTTTCCCATTTTCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACATGAAAAGGTCCAGGTTTTTTTGAATGATTTTCCCATTTTCAGG  548

seq1  TCTTCATTTTCTCAGCCAAATCTGCATAAATATAAATCAAATCTAAGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATTTTCTCAGCCAAATCTGCATAAATATAAATCAAATCTAAGAGC  598

seq1  CCTAGATGGTAAAGGCCAAGGAGACTCTATTGAAGGATCCAGGTGTGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGATGGTAAAGGCCAAGGAGACTCTATTGAAGGATCCAGGTGTGTTA  648

seq1  GCAGCTTTGAAAAGGGGTGGGGTGGGGCTCACCTGCCAGTACAGAGAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GCAGCTTTGAAAAGGGGTGGGGTGGGGCTCACCTGCCAGTACAAAGAGGA  698

seq1  CATGAATTTGGTTTTGCCAGCTTCTGTTTCATTAATGATTCTGAAAGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATTTGGTTTTGCCAGCTTCTGTTTCATTAATGATTCTGAAAGATT  748

seq1  TCACTAAGAATATTAGATGTGATGATATGGATTTCCCATGGTAGGTAGTG  800
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCACTAAGAATATTAGATGTGACGATATGGATTTCCCATGGTAGGTAGTG  798

seq1  CTGTCAGCTGT  811
      |||||||||||
seq2  CTGTCAGCTGT  809

seq1: chr4_147121982_147122661
seq2: B6Ng01-074F02.g_64_743

seq1  GAATTCTCTATCACAAGAAAAGGCTGTCGACTGTCCTCAAGTCTCTTTCG  50
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATCAGAAGAAAAGGCTGTCGACTGTCCTCAAGTCTCTTTCG  50

seq1  TACAGTATCAGACGTTCTAGCTCAAGCAATAAGGCAACTAAAAGAGATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTATCAGACGTTCTAGCTCAAGCAATAAGGCAACTAAAAGAGATCA  100

seq1  AGGGGATATTTATATTTATATCAGACAGTTCATACATTTCAGGTACAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATATTTATATTTATATCAGACAGTTCATACATTTCAGGTACAAAC  150

seq1  TTAATACAGAGTGTTTCGCTGCTTAATAAATGTTTATATCTTCAAGGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACAGAGTGTTTCGCTGCTTAATAAATGTTTATATCTTCAAGGCTT  200

seq1  TTCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCCTGTTTTATGTGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCCTGTTTTATGTGGAG  250

seq1  TTCCTTGATCTACATACACTTGACCTTAGTACAAGGAGATAAGAATGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGATCTACATACACTTGACCTTAGTACAAGGAGATAAGAATGGAT  300

seq1  TAATTCACATTCTTCTACATGTTAATGGCCAGTTGTGCCAGCACCATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCACATTCTTCTACATGTTAATGGCCAGTTGTGCCAGCACCATTTG  350

seq1  TTGACAATGCTGTC-TTTTTTTCCTTTTGTCAATTCTCGAACTTACAGCA  399
      |||| ||||||||| |||||||| ||||||||||||||||||||||||||
seq2  TTGAAAATGCTGTCTTTTTTTTCTTTTTGTCAATTCTCGAACTTACAGCA  400

seq1  CAAGCCATTGCTGTTCTATTCAGGAATTTTTCTCCTGTGCCCATATCTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCATTGCTGTTCTATTCAGGAATTTTTCTCCTGTGCCCATATCTTT  450

seq1  GAGGCTTTTCCCCACTTTCTCCTCTATAAGTTTCACTGTCTATGGTTTTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTTTCCCCACTTTCTCCTCTATAAGTTTCACTGTCTATGGTTTTA  500

seq1  TGTGGAGTTCCTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGTTCCTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAGG  550

seq1  AATGGATCAATTCGCATTCTTCTACATGTTAACCGCCAGTTGTGCCAGCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATCAATTCGCATTCTTCTACATGTTAACCGCCAGTTGTGCCAGCA  600

seq1  CCATTTGTTGAAAATGCCTGTCTTTTTTTCCACTGGATGGTTTTAGCTCC  649
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCATTTGTTGAAAATGCC-GTCTTTTTTTCCACTGGATGGTTTTAGCTCC  649

seq1  CTTGTCAAAGGTCAAGTGACCATTAGTGTGT  680
      ||| |||||||||||||||||||| ||||||
seq2  CTTTTCAAAGGTCAAGTGACCATTGGTGTGT  680