BAC Information

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BAC

Clone NameB6Ng01-074F15
Chromosome4 (Build37)
Map Location 20,884,557 - 20,885,741
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667282, Ttpa, LOC667301, EG664800, E130310K16Rik
Downstream genePrdm13, Ccnc, 2610029I01Rik, Usp45, 4930528A17Rik, 5730406M06Rik, Coq3, 6230409E13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074F15.bB6Ng01-074F15.g
ACCDH891225DH891226
length8431,185
definitionDH891225|Mus musculus domesticus DNA, BAC clone: B6Ng01-074F15, 5' end.DH891226|Mus musculus domesticus DNA, BAC clone: B6Ng01-074F15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatattgaagggctgagaatcacttgaaaaaaaa
tgtttaacatccttcatcatcagggaaatgcaaatcaaaacaaccctgac
attccacctcacaccagtcagaatggctaagatcaaaaattcaggtgaca
gcagatgctggtgatgatgtggagaaagaggaacactcctccattgctgg
tgggattgcaagcttgtacaaccactctggaaatcagtctggcggttcct
cagaaaacttgacatagtattacgggaggatccagcaacacctctcctgg
acatataaccagaagatgttctaactggtaataaggacacatgctccact
atgttcatagcagtcttattcataatagctagaaattggaaagaacccag
atgtccctcaacagaggaatggatacagaaagtgtggtacatttacacaa
tggagtactactcagctattaaagataatgaatttatgaaatttttgggc
aaatggatgtatctggaggatatcaccctgagtgaggtaacccagtcaca
aaaagaagtcacttgatatacactcattgataagtgaaatattagcccaa
aacctagaatactcaagatacaatttgcaaaacacaagaaaatcaagaag
gaaagaccaaacacatggatacttcattcttccttagaataatgaacaaa
atacccatgggaggagttacagagacaaagctttggagttaagacaaaaa
gaatagacattccatagactgccctacccaggtatccatcttcataatcg
gccaccaagcatagacacttttgcatatacccagcaagatttt

gaattccaatgaaaatgtcagtcttttgggcaaatattatgaagacagta
ctagagctttctgtgtaattgaaaaagtagaaaagctatgtataattaga
atataaatttgccagtatttaagttattctttttttataaaagagattat
taaatattcagtgaaatggtattggagaacaatatgtaacaccagggaaa
gaggttcataaattatttcagcacaatcattatttcttgcttattcatat
atatgaaggaacaatccccgcaaaagttacttattctgataataaactta
tacccagataatcatactccccaaaggtcttaatgtaatttggaattgat
acaggaactgacatttgccgccagtgtataatgtcattcctctcagattt
ctgagtgttctacaaggcatccttatgtttttcgtgagaaaaaacagtct
agaatctgttaagtgcttgctgcctgttcagccacacatatctgcatcct
aaggctgctgaagtgcctcagtcttaacatcaactccccactgaactggg
gcaggaatttcatctttcaaatgaattttcttcataggagttctttgtcc
tctagagtaaagattctgaagaagatcctcctgcaaaatcgttatttctt
ccccatgaacgacagaactgggtgagtggattcttggtcagtcctatagt
ctgaacagattaactgagacttaaaggcaagggttctgtggtagatggag
aaagttgaccctgggactcctggctgattcagtcttgccctctaactctc
tgtggtacactatatatcttgtagacagggaaaagatggggcatgctatg
ttggtcatcaccatatcatatgcttaccaaaagtcatatgactcttagaa
acttcttaactttggggaagaaacaaaagagaaagccattatttttagag
acgagtattataaggaacaaattcaccttaccaaagtcctcttatgtata
aaattgaaaatagtaagacacacaaatcatgaaatgaagtgaaagatttt
gatattacatctataagatctagtctctgtgatgggaaaagcaggttgca
tgataatcacattcatagcagcctttacttttaggtctattaatttatta
aggaatacacacgcctacctgcttatctttattag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_20884557_20885741
seq2: B6Ng01-074F15.g_68_1252 (reverse)

seq1  CTAATAAAAGGATATAAGCA-GTAG--CTGTGTATT-CTTATATAATTAA  46
      |||||||    | ||||||| ||||   |||||||| ||||   ||||||
seq2  CTAATAA----AGATAAGCAGGTAGGCGTGTGTATTCCTTAATAAATTAA  46

seq1  TAGACTTTAAAGT-AAGGCTGCTATG-ATGTGATTTATCATGCAACCTGC  94
      ||||| | ||||| |||||||||||| |||||| ||||||||||||||||
seq2  TAGACCTAAAAGTAAAGGCTGCTATGAATGTGA-TTATCATGCAACCTGC  95

seq1  TTTT-CCATCTACAGAGACTAGATCTTAT-GGTGTAATTATCAAATTCTT  142
      |||| ||||| |||||||||||||||||| | ||||| ||||||| ||||
seq2  TTTTCCCATC-ACAGAGACTAGATCTTATAGATGTAA-TATCAAAATCTT  143

seq1  TCACTTCATTTCATGATTTTGTTGTGTCTTACTTATTTTCAATTTTATAC  192
      |||||||||||||||||||   |||||||||| |||||||||||||||||
seq2  TCACTTCATTTCATGATTT--GTGTGTCTTAC-TATTTTCAATTTTATAC  190

seq1  ATAAGA-GACTTT-GTAAGGTGAATTTGTTCCTTATAATACTCGTCTCTA  240
      |||||| |||||| ||||||||||||||||||||||||||||||||||||
seq2  ATAAGAGGACTTTGGTAAGGTGAATTTGTTCCTTATAATACTCGTCTCTA  240

seq1  AAAATAATGGCTTTCTCTTTTGTTTCTTCCCAAAGTTTAAGAAGTTTCTA  290
      ||||||||||||||||||||||||||||||| ||  ||||||||||||||
seq2  AAAATAATGGCTTTCTCTTTTGTTTCTTCCCCAAAGTTAAGAAGTTTCTA  290

seq1  AGAGTCATATGACTTTTGGTAAGCATATGATATGGTGATGACCAACATAG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCATATGACTTTTGGTAAGCATATGATATGGTGATGACCAACATAG  340

seq1  CATGCCCCATCTTTTCCCTGTCTACAAGATATATAGTGTACCACAGAGAG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCCCATCTTTTCCCTGTCTACAAGATATATAGTGTACCACAGAGAG  390

seq1  TTAGAGGGCAAGACTGAATCAGCCAGGAGTCCCAGGGTCAACTTTCTCCA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGGGCAAGACTGAATCAGCCAGGAGTCCCAGGGTCAACTTTCTCCA  440

seq1  TCTACCACAGAACCCTTGCCTTTAAGTCTCAGTTAATCTGTTCAGACTAT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCACAGAACCCTTGCCTTTAAGTCTCAGTTAATCTGTTCAGACTAT  490

seq1  AGGACTGACCAAGAATCCACTCACCCAGTTCTGTCGTTCATGGGGAAGAA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGACCAAGAATCCACTCACCCAGTTCTGTCGTTCATGGGGAAGAA  540

seq1  ATAACGATTTTGCAGGAGGATCTTCTTCAGAATCTTTACTCTAGAGGACA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACGATTTTGCAGGAGGATCTTCTTCAGAATCTTTACTCTAGAGGACA  590

seq1  AAGAACTCCTATGAAGAAAATTCATTTGAAAGATGAAATTCCTGCCCCAG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTCCTATGAAGAAAATTCATTTGAAAGATGAAATTCCTGCCCCAG  640

seq1  TTCAGTGGGGAGTTGATGTTAAGACTGAGGCACTTCAGCAGCCTTAGGAT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGGGGAGTTGATGTTAAGACTGAGGCACTTCAGCAGCCTTAGGAT  690

seq1  GCAGATATGTGTGGCTGAACAGGCAGCAAGCACTTAACAGATTCTAGACT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATATGTGTGGCTGAACAGGCAGCAAGCACTTAACAGATTCTAGACT  740

seq1  GTTTTTTCTCACGAAAAACATAAGGATGCCTTGTAGAACACTCAGAAATC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTCTCACGAAAAACATAAGGATGCCTTGTAGAACACTCAGAAATC  790

seq1  TGAGAGGAATGACATTATACACTGGCGGCAAATGTCAGTTCCTGTATCAA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGAATGACATTATACACTGGCGGCAAATGTCAGTTCCTGTATCAA  840

seq1  TTCCAAATTACATTAAGACCTTTGGGGAGTATGATTATCTGGGTATAAGT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAATTACATTAAGACCTTTGGGGAGTATGATTATCTGGGTATAAGT  890

seq1  TTATTATCAGAATAAGTAACTTTTGCGGGGATTGTTCCTTCATATATATG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATCAGAATAAGTAACTTTTGCGGGGATTGTTCCTTCATATATATG  940

seq1  AATAAGCAAGAAATAATGATTGTGCTGAAATAATTTATGAACCTCTTTCC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGCAAGAAATAATGATTGTGCTGAAATAATTTATGAACCTCTTTCC  990

seq1  CTGGTGTTACATATTGTTCTCCAATACCATTTCACTGAATATTTAATAAT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTTACATATTGTTCTCCAATACCATTTCACTGAATATTTAATAAT  1040

seq1  CTCTTTTATAAAAAAAGAATAACTTAAATACTGGCAAATTTATATTCTAA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTATAAAAAAAGAATAACTTAAATACTGGCAAATTTATATTCTAA  1090

seq1  TTATACATAGCTTTTCTACTTTTTCAATTACACAGAAAGCTCTAGTACTG  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACATAGCTTTTCTACTTTTTCAATTACACAGAAAGCTCTAGTACTG  1140

seq1  TCTTCATAATATTTGCCCAAAAGACTGACATTTTCATTGGAATTC  1185
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATAATATTTGCCCAAAAGACTGACATTTTCATTGGAATTC  1185


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