BAC Information

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BAC

Clone NameB6Ng01-075L19
Chromosome4 (Build37)
Map Location 11,601,135 - 11,725,825
singlet/doubletdoublet
Overlap geneLOC100039862, Gem, Cdh17
Upstream gene1700123O12Rik, LOC383991, LOC100039656, LOC545589, 2610301B20Rik, LOC383992, LOC100039746, Plekhf2, 2310030N02Rik, LOC546828, LOC666897, Trp53inp1, Ccne2, Ints8, Dpy19l4, Rbm35a, LOC634834, 1110037F02Rik, LOC100039847, E130016E03Rik
Downstream genePpm2c, Tmem67, C430048L16Rik, LOC230010, LOC623671, LOC100039958, Rbm12b, 6720467C03Rik, LOC545592
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075L19.bB6Ng01-075L19.g
ACCDH892212DH892213
length1,168805
definitionDH892212|Mus musculus domesticus DNA, BAC clone: B6Ng01-075L19, 5' end.DH892213|Mus musculus domesticus DNA, BAC clone: B6Ng01-075L19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,724,663 - 11,725,825)(11,601,135 - 11,601,938)
sequence
gaattcttctactcaatctacttgaccactgtctgctgaaatgcagggga
cacacaatactaggaagtgaaaaatgcctcagaggatagaggctgagaaa
aaaatgaatactttatttcatgcttacttaagctcagtggctgttagaca
agatacgttccatcacacttcttacggttctgagctctactgtaaattaa
ttcccttctttgttacagccttgcctctgttttgatttatggacatcatc
aggaggctctgggctgcctcaaaactgacttctaacataacaatctagtc
aagtgggcttctctttccctggagctaaataaaccaagacattcctttta
agggtacaatgataacaccacactgtgaccacagccattttccctgacgt
cctttctgccctgacacttactctacgtccaacgctaattcttgcaaata
tagggagcacatttctcttaggcttaagccagaaatatttttcccctttc
ctttcctcttacttggttaaatactaaatgagttaaagtcaccagtattt
ctgatgctaattttttaaatcccaaatgcttggcatagatcttgtagctc
tagctactgtccattgtatgcaaaatctataacaagccaccagcagccat
ttaattttcaatctgaaaaggattgtggttgtagcctttaagcctcattt
agaataaatgagctgttggcaagagtttataaatagacatccctccttac
tctcagtacaccttagggcccctgaggactcacgtgaagatggtgcctga
tttttattgatgcattgagcaggctacctggcacattgtctgtgttttta
tttaaataaagggttcaattatatgatccaaataaaacaaatagtgatat
ctactcacatttgatgcttcaaagatgggaatctgatcattgatatcaat
aacgttgacttgaatatacagagagtcttgaaatctgaaaaccaaagtca
caccacagaattctccctggaaatcatgcattggcatcaggatttggtaa
ggaaacattgacaagtgacccagtagctgctgctaaactttaacaggttc
ctggtgaatggaggctgctctgcccccccaccccaaacaccaccaccctc
attccacagcaaggtcaa
gaattcaccaggtgtttcctagcacagacaggatccctgaagttacaggc
aaaatttttggctaaaggataaagtcacttttaaaaaaaaatctgttatc
caagaaagttacaaatcagcctgctagagaaatccatgagatgcagccag
ccagactccaacagacttttagcatcaacacagagacagatgccctgtgt
ggagaagaaaacagagacaggatgtaaaccagctgcagaagtggctctgg
tggatctacacttcaggatgggggactgggctctgcaggtagcacgtggc
ctggcctggatccacccatgtgaactgaagcctgactgtgcccccgggtg
tctaagtgaggctgctggatgtgggaggcacactgctcctttatgcttag
ctgcccctcactgtcacactgccctgccttctaagcagcccttctggccc
ctccatgaaggaacagcctgccactgtacctcagaatctagcatggaaaa
gattcatgaaaaacagtcagccctctcgactatacatccattgattcaac
aaaattccaatgaaaaagcatttggaaaaaaacaagagcaacttgtctgt
actgagcaggtacagtctgccttagagtcactccccaaaagtcctaccat
caccggacattagcacaacagtccctagtacttacaacgcagttaaatat
aacctagatatgatttaaagcacccaagcgagatatcacctgacggcagt
tcgaagtttcagaactgctcagtacttttttcctggctaaaactccctcc
ccctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_11724663_11725825
seq2: B6Ng01-075L19.b_48_1215 (reverse)

seq1  TTGACCTGCTTGTGG-ATGA-GGTGGTGGTGGTTGGGGT-GGGGGGCAGA  47
      |||||||   ||||| |||| |||||||||| ||||||| ||||||||||
seq2  TTGACCTTGCTGTGGAATGAGGGTGGTGGTGTTTGGGGTGGGGGGGCAGA  50

seq1  GCAGCCTCCATTCA-CAGGAA-CTG-TAAAGTTATAGCAGCAGCTACTGT  94
      |||||||||||||| |||||| ||| ||||||| ||||||||||||||| 
seq2  GCAGCCTCCATTCACCAGGAACCTGTTAAAGTT-TAGCAGCAGCTACTGG  99

seq1  GTCACTTGTCAATGTTTCCTTACCAAATCCTGATGCCAATGCATGATTTC  144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTTGTCAATGTTTCCTTACCAAATCCTGATGCCAATGCATGATTTC  149

seq1  CAGTGAGAATTCTGTGGTGTGACTTTGGTTTTCAGATTTCAAGACTCTCT  194
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGAATTCTGTGGTGTGACTTTGGTTTTCAGATTTCAAGACTCTCT  199

seq1  GTTATATTCAAGTCAACGTTATTGATATCAATGATCAGATTCCCATCTTT  244
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-TATATTCAAGTCAACGTTATTGATATCAATGATCAGATTCCCATCTTT  248

seq1  GAAACATCAAATGTGAGTAGATATCACTATTTGTTTTATTTGGATCATAT  294
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATCAAATGTGAGTAGATATCACTATTTGTTTTATTTGGATCATAT  298

seq1  AATTGAACCC-TTATTTAAATAAAAACACAGACAATGTGCCAGGTAGCCT  343
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AATTGAACCCTTTATTTAAATAAAAACACAGACAATGTGCCAGGTAGCCT  348

seq1  GCTCAATGCATCAATAAAAATCAGGCACCATCTTCACGTGAGTCCTCAGG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAATGCATCAATAAAAATCAGGCACCATCTTCACGTGAGTCCTCAGG  398

seq1  GGCCCTAAGGTGTACTGAGAGTAAGGAGGGATGTCTATTTATAAACTCTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTAAGGTGTACTGAGAGTAAGGAGGGATGTCTATTTATAAACTCTT  448

seq1  GCCAACAGCTCATTTATTCTAAATGAGGCTTAAAGGCTACAACCACAATC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACAGCTCATTTATTCTAAATGAGGCTTAAAGGCTACAACCACAATC  498

seq1  CTTTTCAGATTGAAAATTAAATGGCTGCTGGTGGCTTGTTATAGATTTTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAGATTGAAAATTAAATGGCTGCTGGTGGCTTGTTATAGATTTTG  548

seq1  CATACAATGGACAGTAGCTAGAGCTACAAGATCTATGCCAAGCATTTGGG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAATGGACAGTAGCTAGAGCTACAAGATCTATGCCAAGCATTTGGG  598

seq1  ATTTAAAAAATTAGCATCAGAAATACTGGTGACTTTAACTCATTTAGTAT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAAAATTAGCATCAGAAATACTGGTGACTTTAACTCATTTAGTAT  648

seq1  TTAACCAAGTAAGAGGAAAGGAAAGGGGAAAAATATTTCTGGCTTAAGCC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCAAGTAAGAGGAAAGGAAAGGGGAAAAATATTTCTGGCTTAAGCC  698

seq1  TAAGAGAAATGTGCTCCCTATATTTGCAAGAATTAGCGTTGGACGTAGAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGAAATGTGCTCCCTATATTTGCAAGAATTAGCGTTGGACGTAGAG  748

seq1  TAAGTGTCAGGGCAGAAAGGACGTCAGGGAAAATGGCTGTGGTCACAGTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTCAGGGCAGAAAGGACGTCAGGGAAAATGGCTGTGGTCACAGTG  798

seq1  TGGTGTTATCATTGTACCCTTAAAAGGAATGTCTTGGTTTATTTAGCTCC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTATCATTGTACCCTTAAAAGGAATGTCTTGGTTTATTTAGCTCC  848

seq1  AGGGAAAGAGAAGCCCACTTGACTAGATTGTTATGTTAGAAGTCAGTTTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAGAGAAGCCCACTTGACTAGATTGTTATGTTAGAAGTCAGTTTT  898

seq1  GAGGCAGCCCAGAGCCTCCTGATGATGTCCATAAATCAAAACAGAGGCAA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGCCCAGAGCCTCCTGATGATGTCCATAAATCAAAACAGAGGCAA  948

seq1  GGCTGTAACAAAGAAGGGAATTAATTTACAGTAGAGCTCAGAACCGTAAG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTAACAAAGAAGGGAATTAATTTACAGTAGAGCTCAGAACCGTAAG  998

seq1  AAGTGTGATGGAACGTATCTTGTCTAACAGCCACTGAGCTTAAGTAAGCA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGATGGAACGTATCTTGTCTAACAGCCACTGAGCTTAAGTAAGCA  1048

seq1  TGAAATAAAGTATTCATTTTTTTCTCAGCCTCTATCCTCTGAGGCATTTT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAAAGTATTCATTTTTTTCTCAGCCTCTATCCTCTGAGGCATTTT  1098

seq1  TCACTTCCTAGTATTGTGTGTCCCCTGCATTTCAGCAGACAGTGGTCAAG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCCTAGTATTGTGTGTCCCCTGCATTTCAGCAGACAGTGGTCAAG  1148

seq1  TAGATTGAGTAGAAGAATTC  1163
      ||||||||||||||||||||
seq2  TAGATTGAGTAGAAGAATTC  1168

seq1: chr4_11601135_11601938
seq2: B6Ng01-075L19.g_69_873

seq1  GAATTCACCAGGTGTTTCCTAGCACAGACAGGATCCCTGAAGTTACAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAGGTGTTTCCTAGCACAGACAGGATCCCTGAAGTTACAGGC  50

seq1  AAAATGTTTGGCTAAAGGATAAAGTCACTTTTAAAAAAAAATCTGTTATC  100
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTTGGCTAAAGGATAAAGTCACTTTTAAAAAAAAATCTGTTATC  100

seq1  CAAGAAAGTTACAAATCAGCCTGCTAGAGAAATCCATGAGATGCAGCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAGTTACAAATCAGCCTGCTAGAGAAATCCATGAGATGCAGCCAG  150

seq1  CCAGACTCCAACAGACTTTTAGCATCAACACAGAGACAGATGCCCTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACTCCAACAGACTTTTAGCATCAACACAGAGACAGATGCCCTGTGT  200

seq1  GGAGAAGAAAACAGAGACAGGATGTAAACCAGCTGCAGAAGTGGCTCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGAAAACAGAGACAGGATGTAAACCAGCTGCAGAAGTGGCTCTGG  250

seq1  TGGATCTACACTTCAGGATGGGGGACTGGGCTCTGCAGGTAGCACGTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCTACACTTCAGGATGGGGGACTGGGCTCTGCAGGTAGCACGTGGC  300

seq1  CTGGCCTGGATCCACCCATGTGAACTGAAGCCTGACTGTGCCCCCGGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTGGATCCACCCATGTGAACTGAAGCCTGACTGTGCCCCCGGGTG  350

seq1  TCTAAGTGAGGCTGCTGGATGTGGGAGGCACACTGCTCCTTTATGCTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGTGAGGCTGCTGGATGTGGGAGGCACACTGCTCCTTTATGCTTAG  400

seq1  CTGCCCCTCACTGTCACACTGCCCTGCCTTCTAAGCAGCCCTTCTGGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCTCACTGTCACACTGCCCTGCCTTCTAAGCAGCCCTTCTGGCCC  450

seq1  CTCCATGAAGGAACAGCCTGCCACTGTACCTCAGAATCTAGCATGGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGAAGGAACAGCCTGCCACTGTACCTCAGAATCTAGCATGGAAAA  500

seq1  GATTCATGAAAAACAGTCAGCCCTCTCGACTATACATCCATTGATTCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATGAAAAACAGTCAGCCCTCTCGACTATACATCCATTGATTCAAC  550

seq1  AAAATTCCAATGAAAAAGCATTTGGAAAAAAACAAGAGCAACTTGTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCCAATGAAAAAGCATTTGGAAAAAAACAAGAGCAACTTGTCTGT  600

seq1  ACTGAGCAGGTACAGTCTGCCTTAGAGTCACTCCCCAAAAGTCCTACCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCAGGTACAGTCTGCCTTAGAGTCACTCCCCAAAAGTCCTACCAT  650

seq1  CACCGGACATTAGCACAACAGTCCCTAGTACTTACAACGCAGTTAAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGGACATTAGCACAACAGTCCCTAGTACTTACAACGCAGTTAAATAT  700

seq1  AACCTAGATATGATTTAAAGCACCCAAGCGAGATATCACCTGACGGCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGATATGATTTAAAGCACCCAAGCGAGATATCACCTGACGGCAGT  750

seq1  TCGAAGTTTCAGAACTGCTCAGTAC-TTTTTCCTGGCTAAAACTCCCTCC  799
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCGAAGTTTCAGAACTGCTCAGTACTTTTTTCCTGGCTAAAACTCCCTCC  800

seq1  CCCTG  804
      |||||
seq2  CCCTG  805