BAC Information

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BAC

Clone NameB6Ng01-075P03
Chromosome4 (Build37)
Map Location 37,322,684 - 37,323,872
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042132, LOC545600, LOC621458
Downstream geneLOC277771, LOC100039448
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075P03.bB6Ng01-075P03.g
ACCDH892361DH892362
length1,1781,264
definitionDH892361|Mus musculus domesticus DNA, BAC clone: B6Ng01-075P03, 5' end.DH892362|Mus musculus domesticus DNA, BAC clone: B6Ng01-075P03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccataatgaatgctctgtaaatgttagaattcacagctgatcat
gtgactgtcttcattttgacatatcaataaatatagccacactcaaatta
taaaggcaatcttattattaaagttattttgtagttgtcagaattcattt
ctgaagagaaatgaagtaaaacaggtagccttgttaataaataatctcac
ttaaaacaattttatgaaaatcattgacctttccaaactatcaaatttac
tgtttctctttatcaagctgagtagataaaatcccgaaagcctcatgaga
tatgacagctttgagttcacttattagaccttacgtttagagaacagaaa
tctaggaaactaaagtgctctctcagaatgcaaaagtgtataggggtata
atgacacttgctccgtgaatttcatctctagttgacaccatgaaagtgca
gtatctttgcatattatatttgcattgaaaatacctcagttaaataactg
atgggtaatagcaaaacaagtggaacctgaagatataattattccttaca
tctaatcaaatatatttcattaaaggccaaacccaatagtagctgataac
agttaatgacttgtttggttgttgacatctatcatcttggaatgaaacct
gctcatgttttcttctgccatcagtttatcagggaatacacttggctagt
taatgtggtgacttttcattttcactcattctccactagaccagaattaa
tttaggaggctgagaaagttgaatgtgattactgactgaaaacaagttgt
attttttgaaattcaacgataaaagtaggaataaacaatactgagagatt
atatttttacttaaagacagtgaggttgtgaggatatataaaaattataa
tttggctatatgttcaggagtgggatagcccaaagaatgttccaccatac
cacaaggacacttgctccactaggttcataatagtttactcataataaaa
tttgataaaacttagatgtcatccaacaaaactggataaaatgcacactt
atacatagtgtattccttagctatttcaaacatgaaatcatgatttgtat
aggcaaatggtaagacttagaaaactcattggagtgcggtacctcgaacc
cagaaaaacaaacagtatgtactctctt
gaattcccttaaactgggtcattggaccttattaggatcaatggcctcac
ctcccattgatgcccaataaggccatcctctgctagatatggagctgtag
ccatggctccctccagatgtactctttgcttggtggtttagtccctagga
gctctggggttactggttgattcatattgttgtttcatctatagggcaac
aaactccttcagctccttgggtcctttttctagctcctccattgggaacc
ttgtgctcagtccaatggttggctgagagcatcaacttctgtatttgtca
ggtactggcagagcctttcaggagacagctatatcatgctcctctcagca
aacacttcttggcattcacaacagtgtctggtttggtgactgtatatggg
ataaatactcaggtccctggattgtctttcctccagtctctgctccatgt
catttttttctcatttatctattttaaggtgattcacttaccatgcttga
taaaatcgtcagagtttagagaaaaacagaacactcagtttagaaaaaac
agaactaaacagaacagagtctgtcacataatcatatatttataaacaca
tgcacacatccacatacagacacacatactcatacatacatttgtcctca
cacatacacaaattaacacatatgcacaattcacacacatgtttacccaa
acactaacacacacacacacacacacacacacacacacacacacacacag
agtaattgtaagaatacaggcactcaacaatggtcctctgattctttgag
aggagagaacacagcagttgtgaagtccatttaattctagaggtgtcatc
ccattgggtagtcttgttttgatttaggatggatctgcttctctcaatca
atcctttgtgtaaatgcctgaaaatatatctagcatattatctaagctgt
agacctatgacctgataagtaaattaattgagtgaattaatatttctact
tatgatttatggctcagcttatttatattctttcaatattttacttcaat
gtataaatgacagaagaatatgctatatagaaggtgcttattcacttttc
ttcatttatatattggattctctgttttcatcattaagtgcctggggaca
gaattctatttagagaaatagaatccagggggtttaaaattaacctacct
tgactctgatgacttagcctccacacctggaagaaagacgttgaccacac
acctctccctatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_37322684_37323872
seq2: B6Ng01-075P03.b_43_1220

seq1  GAATTCCCATAATGAATGCTCTGTAAATGTTAGAATTCACAGCTGATCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATAATGAATGCTCTGTAAATGTTAGAATTCACAGCTGATCAT  50

seq1  GTGACTGTCTTCATTTTGACATATCAATAAATATAGCCACACTCAAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGTCTTCATTTTGACATATCAATAAATATAGCCACACTCAAATTA  100

seq1  TAAAGGCAATCTTATTATTAAAGTTATTTTGTAGTTGTCAGAATTCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCAATCTTATTATTAAAGTTATTTTGTAGTTGTCAGAATTCATTT  150

seq1  CTGAAGAGAAATGAAGTAAAACAGGTAGCCTTGTTAATAAATAATCTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAGAAATGAAGTAAAACAGGTAGCCTTGTTAATAAATAATCTCAC  200

seq1  TTAAAACAATTTTATGAAAATCATTGACCTTTCCAAACTATCAAATTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACAATTTTATGAAAATCATTGACCTTTCCAAACTATCAAATTTAC  250

seq1  TGTTTCTCTTTATCAAGCTGAGTAGATAAAATCCCGAAAGCCTCATGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCTTTATCAAGCTGAGTAGATAAAATCCCGAAAGCCTCATGAGA  300

seq1  TATGACAGCTTTGAGTTCACTTATTAGACCTTACGTTTAGAGAACAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACAGCTTTGAGTTCACTTATTAGACCTTACGTTTAGAGAACAGAAA  350

seq1  TCTAGGAAACTAAAGTGCTCTCTCAGAATGCAAAAGTGTATAGGGGTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAAACTAAAGTGCTCTCTCAGAATGCAAAAGTGTATAGGGGTATA  400

seq1  ATGACACTTGCTCCGTGAATTTCATCTCTAGTTGACACCATGAAAGTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACACTTGCTCCGTGAATTTCATCTCTAGTTGACACCATGAAAGTGCA  450

seq1  GTATCTTTGCATATTATATTTGCATTGAAAATACCTCAGTTAAATAACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTTTGCATATTATATTTGCATTGAAAATACCTCAGTTAAATAACTG  500

seq1  ATGGGTAATAGCAAAACAAGTGGAACCTGAAGATATAATTATTCCTTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTAATAGCAAAACAAGTGGAACCTGAAGATATAATTATTCCTTACA  550

seq1  TCTAATCAAATATATTTCATTAAAGGCCAAACCCAATAGTAGCTGATAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATCAAATATATTTCATTAAAGGCCAAACCCAATAGTAGCTGATAAC  600

seq1  AGTTAATGACTTGTTTGGTTGTTGACATCTATCATCTTGGAATGAAACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATGACTTGTTTGGTTGTTGACATCTATCATCTTGGAATGAAACCT  650

seq1  GCTCATGTTTTCTTCTGCCATCAGTTTATCAGGGAATACACTTGGCTAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATGTTTTCTTCTGCCATCAGTTTATCAGGGAATACACTTGGCTAGT  700

seq1  TAATGTGGTGACTTTTCATTTTCACTCATTCTCCACTAGACCAGAATTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGGTGACTTTTCATTTTCACTCATTCTCCACTAGACCAGAATTAA  750

seq1  TTTAGGAGGCTGAGAAAGTTGAATGTGATTACTGACTGAAAACAAGTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGAGGCTGAGAAAGTTGAATGTGATTACTGACTGAAAACAAGTTGT  800

seq1  ATTTTTTGAAATTCAACGATAAAAGTAGGAATAAACAATACTGAGAGATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTGAAATTCAACGATAAAAGTAGGAATAAACAATACTGAGAGATT  850

seq1  ATATTTTTACTTAAAGACAGTGAGGTTGTGAGGATATATAAAAATTATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTACTTAAAGACAGTGAGGTTGTGAGGATATATAAAAATTATAA  900

seq1  TTTGGCTATATGTTCAGGAGTGGGATAGCCAAAAGAATGTTCCACCATAC  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTGGCTATATGTTCAGGAGTGGGATAGCCCAAAGAATGTTCCACCATAC  950

seq1  CACAAGGACACTTGCTCCACTAGGTTCATAATAGTTTTACTCATAATAAA  1000
      |||||||||||||||||||||||||||||||||| |||||||||||| ||
seq2  CACAAGGACACTTGCTCCACTAGGTTCATAATAG-TTTACTCATAAT-AA  998

seq1  AATTTGATAAAACTTAGATGTCATCCAACCAAAAACTGGATAAAAATGCA  1050
      |||||||||||||||||||||||||||||  |||||||||| ||||||||
seq2  AATTTGATAAAACTTAGATGTCATCCAAC--AAAACTGGAT-AAAATGCA  1045

seq1  CACTTATACAATAGTGTATTCCTTAGCTATTCAAAACAATGACATCATGA  1100
      ||||||||| |||||||||||||||||||||  |||| |||| |||||||
seq2  CACTTATAC-ATAGTGTATTCCTTAGCTATTTCAAAC-ATGAAATCATGA  1093

seq1  TTTGTATAGGCAAATGGTAAGACCTAGAAAAACTCATTGGGAGTGCGGTA  1150
      ||||||||||||||||||||||| ||| |||||||||| |||||||||||
seq2  TTTGTATAGGCAAATGGTAAGACTTAG-AAAACTCATT-GGAGTGCGGTA  1141

seq1  ACTCAGACCCAGAAAAACAAACAAGGTATGTACTCTCTT  1189
       |||  |||||||||||||||||  ||||||||||||||
seq2  CCTCGAACCCAGAAAAACAAACA--GTATGTACTCTCTT  1178