BAC Information

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BAC

Clone NameB6Ng01-075P19
Chromosome4 (Build37)
Map Location 103,166,040 - 103,300,724
singlet/doubletdoublet
Overlap geneLOC665451, LOC100039940
Upstream genePde4b, Sgip1, Tctex1d1, Insl5, Wdr78, Mier1, Slc35d1, 4921539E11Rik, 4930456L15Rik, Oma1
Downstream geneEG665460, LOC622315, Dab1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075P19.bB6Ng01-075P19.g
ACCDH892389DH892390
length1,147169
definitionDH892389|Mus musculus domesticus DNA, BAC clone: B6Ng01-075P19, 5' end.DH892390|Mus musculus domesticus DNA, BAC clone: B6Ng01-075P19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,299,573 - 103,300,724)(103,166,040 - 103,166,208)
sequence
gaattcaagtgaatttttctagcatcttatttttcaatattcacttgcaa
ctgatttctatcacttatatgttataaaatgataaaggaacaaaactgct
cacatcagtggtgatcaacattggtcctgcaggccaaggtagctaacctc
agatgtaagagacagggtatgggggaaaggatgggatgtgggcaggaaaa
actgtgtaagtaaaagtatcaggagagaaagaaatcagtcagggctcacc
caaggtatgccagcctagatacagcaacaagttcaaagatgcaagtgaag
agttgaagttcatgtctgtaatagatccaaaagctgggaaacagagttgg
tcaccataatgcacttacaagatgatctttccttaacgctgacaaatgaa
aagagcatggcttttagccagatccacaaatggacaaatattttgagtgc
ttaggactctgtccatggtgacaccatgtgttacactcagatgtaaactt
cagtttggttacattttcattttaaaccctccttcctgtcagtttccaac
ttgcctgtaaatatttgcttggagaaaatgtcaccaaaagatctaagctc
aagaaaaaagaaaggaaaaaaaaaaggcaaggaaaaaaaggtcattttga
aacaagaagctgctgcattttgcatgttaactaaacaagaagtcttaaga
cctgtggctcagagctcatttcaggaaaaaaaatgcttttatttattaaa
agcctatgaatacaaatgaattctatatttggtatttgcacttgtttaat
tctgcctcccacttctgagatagaaatcacgtgtgctttgccaggtgaat
taaaaggttgtctgatgtcatcaggtcacctgttgtcccagtgtggctat
tggaggaatctcaatacttgataagtattctggcaccattgccatatgaa
aggatcctgagtatcactgacagtaccactttcctttctcaaacccagaa
agtgacacacaatggtcctcagtagcttatgccaaccttgagaagctctc
cctctgtcaccaggtgtcctttcgatttaccagcttcattcacaaggaac
caattacctattctcctctctttctattggatccggcaggcaatgct
agaagaaaggtcttagcagcggggagtgagacatttacctgcaaaataaa
aggctgaattaaggtttggcaaactttagtcagtagagaaacataggcaa
ctgttagaaacatagctcttgatgccaaattggacccatacatttttatg
ggtaggagggagggaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_103299573_103300724
seq2: B6Ng01-075P19.b_48_1194 (reverse)

seq1  AGCATCGCCTGCCGTGTATTCTAATAG--AGAGAGGAGAATAGGTAAATT  48
      ||||| ||||||||     || |||||  ||||||||||||||||||  |
seq2  AGCATTGCCTGCCG---GATCCAATAGAAAGAGAGGAGAATAGGTAA--T  45

seq1  GGGTCCCTTGTGATTTGAAGCCTGGGTTAAATCGAAA-GACACCTTGTGA  97
       ||| ||||||||  ||||| ||||  |||||||||| ||||||| ||||
seq2  TGGTTCCTTGTGA-ATGAAG-CTGG--TAAATCGAAAGGACACCTGGTGA  91

seq1  CAGAGGGAAGAGCCTCTC-AGGTTGGCAT-AGCTACTGAGGACCATGGTG  145
      ||||||| ||||| |||| |||||||||| |||||||||||||||| |||
seq2  CAGAGGG-AGAGCTTCTCAAGGTTGGCATAAGCTACTGAGGACCATTGTG  140

seq1  TGTCACTTTCTGGTTTTGAGAAAGG-AAGTGGTACTGTCAGTGATACTCA  194
      ||||||||||||| ||||||||||| ||||||||||||||||||||||||
seq2  TGTCACTTTCTGGGTTTGAGAAAGGAAAGTGGTACTGTCAGTGATACTCA  190

seq1  GGATCCTTTCATATTGGCAATGGTGCCAGAATACTTATCAAGTATTGAGA  244
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGATCCTTTCATA-TGGCAATGGTGCCAGAATACTTATCAAGTATTGAGA  239

seq1  TTCCTCCAATAGCCACACTGTGACAACAGGTGACCTGATGACATCAGACA  294
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTCCTCCAATAGCCACACTGGGACAACAGGTGACCTGATGACATCAGACA  289

seq1  ACCTTTTAATTCACCTGGCAAAGCACACGTGATTTCTATCTCAGAAGTGG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTAATTCACCTGGCAAAGCACACGTGATTTCTATCTCAGAAGTGG  339

seq1  GAGGCAGAATTAAACAAGTGCAAATACCAAATATAGAATTCATTTGTATT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAATTAAACAAGTGCAAATACCAAATATAGAATTCATTTGTATT  389

seq1  CATAGGCTTTTAATAAATAAAAGCATTTTTTTTCCTGAAATGAGCTCTGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGCTTTTAATAAATAAAAGCATTTTTTTTCCTGAAATGAGCTCTGA  439

seq1  GCCACAGGTCTTAAGACTTCTTGTTTAGTTAACATGCAAAATGCAGCAGC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAGGTCTTAAGACTTCTTGTTTAGTTAACATGCAAAATGCAGCAGC  489

seq1  TTCTTGTTTCAAAATGACCTTTTTTTCCTTGCCTTTTTTTTTTCCTTTCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTTTCAAAATGACCTTTTTTTCCTTGCCTTTTTTTTTTCCTTTCT  539

seq1  TTTTTCTTGAGCTTAGATCTTTTGGTGACATTTTCTCCAAGCAAATATTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTGAGCTTAGATCTTTTGGTGACATTTTCTCCAAGCAAATATTT  589

seq1  ACAGGCAAGTTGGAAACTGACAGGAAGGAGGGTTTAAAATGAAAATGTAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAAGTTGGAAACTGACAGGAAGGAGGGTTTAAAATGAAAATGTAA  639

seq1  CCAAACTGAAGTTTACATCTGAGTGTAACACATGGTGTCACCATGGACAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTGAAGTTTACATCTGAGTGTAACACATGGTGTCACCATGGACAG  689

seq1  AGTCCTAAGCACTCAAAATATTTGTCCATTTGTGGATCTGGCTAAAAGCC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTAAGCACTCAAAATATTTGTCCATTTGTGGATCTGGCTAAAAGCC  739

seq1  ATGCTCTTTTCATTTGTCAGCGTTAAGGAAAGATCATCTTGTAAGTGCAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTTTTCATTTGTCAGCGTTAAGGAAAGATCATCTTGTAAGTGCAT  789

seq1  TATGGTGACCAACTCTGTTTCCCAGCTTTTGGATCTATTACAGACATGAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTGACCAACTCTGTTTCCCAGCTTTTGGATCTATTACAGACATGAA  839

seq1  CTTCAACTCTTCACTTGCATCTTTGAACTTGTTGCTGTATCTAGGCTGGC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAACTCTTCACTTGCATCTTTGAACTTGTTGCTGTATCTAGGCTGGC  889

seq1  ATACCTTGGGTGAGCCCTGACTGATTTCTTTCTCTCCTGATACTTTTACT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTTGGGTGAGCCCTGACTGATTTCTTTCTCTCCTGATACTTTTACT  939

seq1  TACACAGTTTTTCCTGCCCACATCCCATCCTTTCCCCCATACCCTGTCTC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGTTTTTCCTGCCCACATCCCATCCTTTCCCCCATACCCTGTCTC  989

seq1  TTACATCTGAGGTTAGCTACCTTGGCCTGCAGGACCAATGTTGATCACCA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATCTGAGGTTAGCTACCTTGGCCTGCAGGACCAATGTTGATCACCA  1039

seq1  CTGATGTGAGCAGTTTTGTTCCTTTATCATTTTATAACATATAAGTGATA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTGAGCAGTTTTGTTCCTTTATCATTTTATAACATATAAGTGATA  1089

seq1  GAAATCAGTTGCAAGTGAATATTGAAAAATAAGATGCTAGAAAAATTCAC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCAGTTGCAAGTGAATATTGAAAAATAAGATGCTAGAAAAATTCAC  1139

seq1  TTGAATTC  1152
      ||||||||
seq2  TTGAATTC  1147

seq1: chr4_103166040_103166208
seq2: B6Ng01-075P19.g_74_242

seq1  AGAAGAAAGGTCTTAGCAGCGGGGAGTGAGACATTTACCTGCAAAATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAGGTCTTAGCAGCGGGGAGTGAGACATTTACCTGCAAAATAAA  50

seq1  AGGCTGAATTAAGGTTTGGCAAACTTTAGTCAGTAGAGAAACATAGGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGAATTAAGGTTTGGCAAACTTTAGTCAGTAGAGAAACATAGGCAA  100

seq1  CTGTTAGAAACATAGCTCTTGATGCCAAATTGGACCCATACATTTTTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAGAAACATAGCTCTTGATGCCAAATTGGACCCATACATTTTTATG  150

seq1  GGTAGGAGGGAGGGAGGGA  169
      |||||||||||||||||||
seq2  GGTAGGAGGGAGGGAGGGA  169