BAC Information

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BAC

Clone NameB6Ng01-076C08
Chromosome4 (Build37)
Map Location 126,378,053 - 126,497,250
singlet/doubletdoublet
Overlap genePsmb2, Tcfap2e, Ncdn, AU040320
Upstream geneGrik3, Csf3r, Mrps15, 1810007P19Rik, LOC100039645, Lsm10, Stk40, 2610027C15Rik, 1700029G01Rik, Thrap3, Mtap7d1, Trappc3, Col8a2, EG667193, Adprhl2, Tekt2, Eif2c3, Eif2c1, LOC100039351, Eif2c4, Clspn, LOC665197, 5730409E04Rik, LOC620877
Downstream geneSfpq, Zmym1, LOC665245, Zmym6, LOC100039968, LOC621588, Dlgap3, BC003266, Gja4, Gjb3, Gjb4, Gjb5, LOC667296
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076C08.bB6Ng01-076C08.g
ACCDH892499DH892500
length772270
definitionDH892499|Mus musculus domesticus DNA, BAC clone: B6Ng01-076C08, 5' end.DH892500|Mus musculus domesticus DNA, BAC clone: B6Ng01-076C08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,496,480 - 126,497,250)(126,378,053 - 126,378,322)
sequence
gaattctgccgggcagtggtgacgcaagcctttaatcccagcactcagga
ggcagaggcaggcagatttctgagttcgaggcagcctggtctacagagtg
agttccaggacaggcagggctacacagagaaaccctgtttcgaaaacaaa
caaacgaaaaaaaaagaatgctgaactcaaccaggtacacatggttgatc
tgagctcgggaagcagagggaggtgaaactcaatgagttcaaggtcagcc
aggcctacgcagtgaggctctgtctcaaaaataacaaattaaattatctg
taatgggtgtctgtgtagggatatgtgcaacagagtgtaggtgctctatg
gggccaagattcaattgagctggagttacaagtggttataatctaccagt
gtgggcactgggaattgaactcaggtcctctggaaaagcagaacatcttc
ttaaacactgagcagtgtctccagacccaacagccaagaacagtgaatca
gaaacacccaaatagaaaacagaagggcttgcctgaaagaggaagcacac
tttgcttggtcagcctttaacacaagtaacacaaatcaaccactttcaat
gctctactcctgtctcaggaggtcttaagaggggctggagagatggctca
gtggttagagcactggctgctcttccaaagggccctcagttcaattccta
ccacctggtagctcacaagcatctgtagtaaaatctgatgggcctttttt
ggtgtgtctgaaaacagtaaca
tctgtgatagcatcttctggatttttgtattatctagtcaaagcttaaaa
atgagcaggtggggttatttaggttttgatattactgcatataggcatta
cactgggtgcttcacatgtatttaagcctcaggaaaatttaaaatggcct
ggatctcttcacttggtaaataagctcatgtctgaccacacccccacaca
cctcaacacatgcacctggaataaggggtttgtttgttcttttgtttttt
gtttttgggggggggtttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_126496480_126497250
seq2: B6Ng01-076C08.b_47_818 (reverse)

seq1  TGTTACTGTTTTCAGACACACCATAAATGG-CCATCAGATTCTACTACAG  49
      ||||||||||||||||||||||| ||| || |||||||||| ||||||||
seq2  TGTTACTGTTTTCAGACACACCAAAAAAGGCCCATCAGATTTTACTACAG  50

seq1  ATGCTTGTGAGCTACCAGGTGGTAGGAATTGAACTGAGGG-CCTTTGGAA  98
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATGCTTGTGAGCTACCAGGTGGTAGGAATTGAACTGAGGGCCCTTTGGAA  100

seq1  GAGCAGCCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCTCTTAAG  148
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GAGCAGCCAGTGCTC-TAACCACTGAGCCATCTCTCCAGCCCCTCTTAAG  149

seq1  ACCTCCTGAGACAGGAGTAGAGCATTGAAAGTGGTTGATTTGTGTTACTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTGAGACAGGAGTAGAGCATTGAAAGTGGTTGATTTGTGTTACTT  199

seq1  GTGTTAAAGGCTGACCAAGCAAAGTGTGCTTCCTCTTTCAGGCAAGCCCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAAAGGCTGACCAAGCAAAGTGTGCTTCCTCTTTCAGGCAAGCCCT  249

seq1  TCTGTTTTCTATTTGGGTGTTTCTGATTCACTGTTCTTGGCTGTTGGGTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTCTATTTGGGTGTTTCTGATTCACTGTTCTTGGCTGTTGGGTC  299

seq1  TGGAGACACTGCTCAGTGTTTAAGAAGATGTTCTGCTTTTCCAGAGGACC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACACTGCTCAGTGTTTAAGAAGATGTTCTGCTTTTCCAGAGGACC  349

seq1  TGAGTTCAATTCCCAGTGCCCACACTGGTAGATTATAACCACTTGTAACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCAATTCCCAGTGCCCACACTGGTAGATTATAACCACTTGTAACT  399

seq1  CCAGCTCAATTGAATCTTGGCCCCATAGAGCACCTACACTCTGTTGCACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCAATTGAATCTTGGCCCCATAGAGCACCTACACTCTGTTGCACA  449

seq1  TATCCCTACACAGACACCCATTACAGATAATTTAATTTGTTATTTTTGAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCTACACAGACACCCATTACAGATAATTTAATTTGTTATTTTTGAG  499

seq1  ACAGAGCCTCACTGCGTAGGCCTGGCTGACCTTGAACTCATTGAGTTTCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCCTCACTGCGTAGGCCTGGCTGACCTTGAACTCATTGAGTTTCA  549

seq1  CCTCCCTCTGCTTCCCGAGCTCAGATCAACCATGTGTACCTGGTTGAGTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCTGCTTCCCGAGCTCAGATCAACCATGTGTACCTGGTTGAGTT  599

seq1  CAGCATTCTTTTTTTTTCGTTTGTTTGTTTTCGAAACAGGGTTTCTCTGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTCTTTTTTTTTCGTTTGTTTGTTTTCGAAACAGGGTTTCTCTGT  649

seq1  GTAGCCCTGCCTGTCCTGGAACTCACTCTGTAGACCAGGCTGCCTCGAAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCCTGCCTGTCCTGGAACTCACTCTGTAGACCAGGCTGCCTCGAAC  699

seq1  TCAGAAATCTGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGGCTTGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATCTGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGGCTTGC  749

seq1  GTCACCACTGCCCGGCAGAATTC  771
      |||||||||||||||||||||||
seq2  GTCACCACTGCCCGGCAGAATTC  772

seq1: chr4_126378053_126378322
seq2: B6Ng01-076C08.g_77_346

seq1  TCTGTGATAGCATCTTCTGGATTTTTGTATTATCTAGTCAAAGCTTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGATAGCATCTTCTGGATTTTTGTATTATCTAGTCAAAGCTTAAAA  50

seq1  ATGAGCAGGTGGGGTTATTTAGGTTTTGATATTACTGCATATAGGCATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCAGGTGGGGTTATTTAGGTTTTGATATTACTGCATATAGGCATTA  100

seq1  CACTGGGTGCTTCACATGTATTTAAGCCTCAGGAAAATTTAAAATGGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGTGCTTCACATGTATTTAAGCCTCAGGAAAATTTAAAATGGCCT  150

seq1  GGATCTCTTCACTTGGTAAATAAGCTCATGTCTGACCACACCCCCACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTCTTCACTTGGTAAATAAGCTCATGTCTGACCACACCCCCACACA  200

seq1  CCTCAACACATGCACCTGGAATAAGGGGTTTGTTTGTTCTTTTGTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAACACATGCACCTGGAATAAGGGGTTTGTTTGTTCTTTTGTTTTTT  250

seq1  GTTTTTGGGGGGGGGTTTGG  270
      ||||||||||||||||||||
seq2  GTTTTTGGGGGGGGGTTTGG  270