BAC Information

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BAC

Clone NameB6Ng01-076F04
Chromosome4 (Build37)
Map Location 52,587,380 - 52,587,908
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC384015, LOC100041026, LOC100041038, LOC666724, Smc2, LOC100040883
Downstream gene4930547C10Rik, LOC100040908, LOC666761, Olfr275, Olfr274-ps1, Olfr273, LOC230185, Olfr272, Olfr271-ps1, Olfr270, 1700054F22Rik, Nipsnap3a, Abca1, 4930522O17Rik, AI427809, LOC100041197, Slc44a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076F04.bB6Ng01-076F04.g
ACCDH892624DH892625
length911523
definitionDH892624|Mus musculus domesticus DNA, BAC clone: B6Ng01-076F04, 5' end.DH892625|Mus musculus domesticus DNA, BAC clone: B6Ng01-076F04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccaaatgactgagaaacaccttgaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcagatgacagc
aggtgttggcgaggatgtggagaaagaagaacactcctccattgctggtg
ggattgcaagctagtagaaccactctggaaatcagtctggcagcccctca
gaaaattggacatagtattaccaaacgatctagctataccactcctggac
atatacccagaagatgctccaatatgtaataaagacacatgtaccactat
gtaaatagcagccttatttataataaccagaagctggaaagaactcagat
gtccctcaacagaggaatggacaaagaaaatgtgatacatttacacaatg
gtattaaaaatagcgaattcgtgaaattcttagacaaatggatggatctg
ggaggatatcatcctaagtgaggtaaaccaatcacaaaagaacaccctga
tgtgaacttgataataagtgatattagcccgaagctagattctcaagata
catttgcaaaaccagaaatcaagagaaggaaaccaagggggctactttga
tccttctataaggggaaaaatgccatgaagattacgagacaattcgagca
aactgagaatgctccaagctgcccactgggtctccttaagacacaaccaa
cttttgatgcacaaacttctacggacctgatagtgttcgaaggttgcatc
ttcaatcaatgtagccagcctcctgataccgggcccatagatgagagtcc
agggttagttgacctaggacatatagatattcctagctctgttacaccaa
actgtgaccat
ttccttgtactttaacaagtaagactttcttcttcctcttggatggtttt
cttttaagtgttttctgagggctggtttgcttgctaccaatcatccacat
tattatttgtcttgaaatattattatttccctagaaattttaagtgattt
ttttggtcaagtagagaagtactactcttaggatttgaaatatattgtta
cattctttgttggctttaaggagttctgatgagaggtcttctagacatga
tgggatcactatacccatgagccttagcttcctgttcaagaccaagccag
tcaaaattcaaatatggaacgtggcaaggctctcaccctgaagagaggaa
ctacagacaactaataacttctggggggaggggttcattttcctttaaga
aaatgtcccctggtaggtcaactactattcaggctacggtcctactcagg
aatatatgggcaatacaatttggatgtggttggtcattaagacactgaat
tggtgggtagggtggagggttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_52587380_52587908
seq2: B6Ng01-076F04.g_68_596 (reverse)

seq1  AGAACCCTCCACCCTACCCACCAATTCAGTGTCTTAATGACCAACCACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCTCCACCCTACCCACCAATTCAGTGTCTTAATGACCAACCACAT  50

seq1  CCAAATTGTATTGCCCATATATTCCTGAGTAGGACCGTAGCCTGAATAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTGTATTGCCCATATATTCCTGAGTAGGACCGTAGCCTGAATAGT  100

seq1  AGTTGACCTACCAGGGGACATTTTCTTAAAGGAAAATGAACCCCTCCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGACCTACCAGGGGACATTTTCTTAAAGGAAAATGAACCCCTCCCCC  150

seq1  CAGAAGTTATTAGTTGTCTGTAGTTCCTCTCTTCAGGGTGAGAGCCTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTTATTAGTTGTCTGTAGTTCCTCTCTTCAGGGTGAGAGCCTTGC  200

seq1  CACGTTCCATATTTGAATTTTGACTGGCTTGGTCTTGAACAGGAAGCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTTCCATATTTGAATTTTGACTGGCTTGGTCTTGAACAGGAAGCTAA  250

seq1  GGCTCATGGGTATAGTGATCCCATCATGTCTAGAAGACCTCTCATCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCATGGGTATAGTGATCCCATCATGTCTAGAAGACCTCTCATCAGAA  300

seq1  CTCCTTAAAGCCAACAAAGAATGTAACAATATATTTCAAATCCTAAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTAAAGCCAACAAAGAATGTAACAATATATTTCAAATCCTAAGAGT  350

seq1  AGTACTTCTCTACTTGACCAAAAAAATCACTTAAAATTTCTAGGGAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTTCTCTACTTGACCAAAAAAATCACTTAAAATTTCTAGGGAAATA  400

seq1  ATAATATTTCAAGACAAATAATAATGTGGATGATTGGTAGCAAGCAAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTTCAAGACAAATAATAATGTGGATGATTGGTAGCAAGCAAACC  450

seq1  AGCCCTCAGAAAACACTTAAAAGAAAACCATCCAAGAGGAAGAAGAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCAGAAAACACTTAAAAGAAAACCATCCAAGAGGAAGAAGAAAGT  500

seq1  CTTACTTGTTAAAGTACAAGGAAGAATTC  529
      |||||||||||||||||||||||||||||
seq2  CTTACTTGTTAAAGTACAAGGAAGAATTC  529