BAC Information

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BAC

Clone NameB6Ng01-077K17
Chromosome4 (Build37)
Map Location 118,925,354 - 119,078,465
singlet/doubletdoublet
Overlap geneCldn19, Ybx1, Ppih, 1700041C02Rik, Ldha-ps2
Upstream genePtprf, Hyi, BC059842, Med8, Elovl1, Cdc20, Mpl, Tie1, LOC545675, LOC666596, 2610528J11Rik, 6330530A05Rik, 1110020C03Rik, Ebna1bp2, LOC100041290, Olfr62, Olfr1343-ps1, Olfr1342, Olfr1341, Olfr1340, Olfr1339, Olfr1338, Olfr1524-ps1, Olfr1337, Olfr219-ps1, GA_x5J8B7W3BSW-40181-41086, Olfr1335, Olfr1333, GA_x5J8B7TQTH0-2-774, Olfr1332-ps1, Olfr1331, Olfr1330, Olfr1329, Olfr1519, Lao1, LOC666703, OTTMUSG00000008833, Slc2a1, Zfp691, Ermap, Ccdc23, 4930538K18Rik, AU022252, Lepre1
Downstream geneLOC100041471, Ppcs, Zmynd12, BC057371, LOC666766, LOC384052, AA415398, Foxj3, Guca2a, Guca2b, Hivep3, Edn2, Foxo6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077K17.bB6Ng01-077K17.g
ACCDH893582DH893583
length7161,007
definitionDH893582|Mus musculus domesticus DNA, BAC clone: B6Ng01-077K17, 5' end.DH893583|Mus musculus domesticus DNA, BAC clone: B6Ng01-077K17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,925,354 - 118,926,069)(119,077,733 - 119,078,465)
sequence
gaattccagatggctttggaacactggtacaggaaggctgttggtgaagc
agagaatattcaggtagaacagacccaaatctcaaatgacaaaggaaaaa
aaaaaaactgcaggagtttcaggggacgatataagaatcgtggaacctta
cgctggctggtggtgaattaacctaacccggcactctggaggcagaggca
ggtgtatctttctgagttccaggccagcctggtctatagagctagtgcca
ggatagccagggctacacacatgagaagaaaaagtaattatggaggctct
gggtttttagtctggggatgacctgaaggaaggaaggtgtagacagacag
gcttcctgctgcccctcaggcttcaaatctgggacacattagctctgggg
acaatgagcaccatcccctccacctcagctctcacatgtctggagacagg
ggtcacagctagtgttcagtgtggtcctgatgctccagaactcagggatc
tgaccagtgtgtccaaggtcagaacgaggcttggttcttcctcacagaga
actctttgccagaggccaaggctcagcttggggagagaggaacttgtctg
gcctttccaatagcctctgtagagttgctaccagtgcagaccctctgact
cccctaagcttcatgccagctcagcaaaacagtatctcttttttgggggt
ggtggtggatgaggca
gaattcactttgtagagcaggctggcctcgaactcagaagtccgcctgcc
tctgcctcccaagtgccgagattaaaggcgtgcgccaccgcgcccggctt
ttttattattctttttaaaaacatcatgcatcctcttgtgtgtctgcttc
agcaaaacatcctgtcatttgtctgccccagcaaaacatcatatgacata
gctgaatttccagagaaatgagaaatttccacttcaagctgcggtggcaa
tgaagtacttatagagtgggagcggctccctgctcttactgctgttcctg
tgtgacagtgaacagtgatgaccaaagattctcccactatacttccttcc
tcttcctccctccctccctcccttcctccctctcttccttcctccttcac
tctcttcttccctcctcccttctttgccccctctcttcttccctccctcc
cttcttctctctcttccttcctcccttcctttctccctccctctcttctt
tcctccttctcttccttcatttcttccttcctcttccttccatccttcct
tcctcttcctccctccctctttccatcactttcccttcacctttcccatt
tctccttccctttctacccctttctttcctttcaaaagttttatttttac
ttttgtttgtgtgtttgtgtgtgcacgtgtgccagtcacatgtctttgag
ccccaatcaaggccagaatagagcatctaagctctatctaaactattaaa
aaggagttacaaatgtttgttgtgttagaattgcggctctttcatacaga
tcataccagtccagcgcaggttctagttttttttgggggggagggggcac
gagtacaaaaaggggcaatgaagaatgagcgagagaaggtcatgggctct
gctttttatttgggctgtattgtaactgccacatactgctgtgccctgcc
tgcgctgttttttgtttcttaaggaaaagtttatgtagccgtaaatggct
ctcaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_118925354_118926069
seq2: B6Ng01-077K17.b_49_764

seq1  GAATTCCAGATGGCTTTGGAACACTGGTACAGGAAGGCTGTTGGTGAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATGGCTTTGGAACACTGGTACAGGAAGGCTGTTGGTGAAGC  50

seq1  AGAGAATATTCAGGTAGAACAGACCCAAATCTCAAATGACAAAGGAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATATTCAGGTAGAACAGACCCAAATCTCAAATGACAAAGGAAAAA  100

seq1  AAAAAAACTGCAGGAGTTTCAGGGGACGATATAAGAATCGTGGAACCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACTGCAGGAGTTTCAGGGGACGATATAAGAATCGTGGAACCTTA  150

seq1  CGCTGGCTGGTGGTGAATTAACCTAACCCGGCACTCTGGAGGCAGAGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGGCTGGTGGTGAATTAACCTAACCCGGCACTCTGGAGGCAGAGGCA  200

seq1  GGTGTATCTTTCTGAGTTCCAGGCCAGCCTGGTCTATAGAGCTAGTGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTATCTTTCTGAGTTCCAGGCCAGCCTGGTCTATAGAGCTAGTGCCA  250

seq1  GGATAGCCAGGGCTACACACATGAGAAGAAAAAGTAATTATGGAGGCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGCCAGGGCTACACACATGAGAAGAAAAAGTAATTATGGAGGCTCT  300

seq1  GGGTTTTTAGTCTGGGGATGACCTGAAGGAAGGAAGGTGTAGACAGACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTTAGTCTGGGGATGACCTGAAGGAAGGAAGGTGTAGACAGACAG  350

seq1  GCTTCCTGCTGCCCCTCAGGCTTCAAATCTGGGACACATTAGCTCTGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTGCTGCCCCTCAGGCTTCAAATCTGGGACACATTAGCTCTGGGG  400

seq1  ACAATGAGCACCATCCCCTCCACCTCAGCTCTCACATGTCTGGAGACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGAGCACCATCCCCTCCACCTCAGCTCTCACATGTCTGGAGACAGG  450

seq1  GGTCACAGCTAGTGTTCAGTGTGGTCCTGATGCTCCAGAACTCAGGGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACAGCTAGTGTTCAGTGTGGTCCTGATGCTCCAGAACTCAGGGATC  500

seq1  TGACCAGTGTGTCCAAGGTCAGAACGAGGCTTGGTTCTTCCTCACAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGTGTGTCCAAGGTCAGAACGAGGCTTGGTTCTTCCTCACAGAGA  550

seq1  ACTCTTTGCCAGAGGCCAAGGCTCAGCTTGGGGAGAGAGGAACTTGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTGCCAGAGGCCAAGGCTCAGCTTGGGGAGAGAGGAACTTGTCTG  600

seq1  GCCTTTCCAATAGCCTCTGTAGAGTTGCTACCAGTGCAGACCCTCTGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCCAATAGCCTCTGTAGAGTTGCTACCAGTGCAGACCCTCTGACT  650

seq1  CCCCTAAGCTTCATGCCAGCTCAGCAAAACAGTATCTCTTTTTTGGGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAAGCTTCATGCCAGCTCAGCAAAACAGTATCTCTTTTTTGGGGGT  700

seq1  GGTGGTGGATGAGGCA  716
      ||||||||||||||||
seq2  GGTGGTGGATGAGGCA  716

seq1: chr4_119077733_119078465
seq2: B6Ng01-077K17.g_342_1077 (reverse)

seq1  GCTTGAG-GCCATCTACGGCTACATAAAACTCTTCCTTAAGAAACAAAAA  49
      ||||||| ||||| ||||||||||| ||||| ||||||||||||||||||
seq2  GCTTGAGAGCCATTTACGGCTACAT-AAACTTTTCCTTAAGAAACAAAAA  49

seq1  CAAGCGCAGGCAGTGCACAGCAGTATGT-GCAGTTACATTACAGCCCAAA  98
        ||||||||||| |||||||||||||| ||||||||| |||||||||||
seq2  ACAGCGCAGGCAGGGCACAGCAGTATGTGGCAGTTACAATACAGCCCAAA  99

seq1  TAAAAAGCAGAGCCCCCTGACCTTCTCTCGCTCATTCTTCATTGCCCCTT  148
      |||||||||||| ||| |||||||||||||||||||||||||||||||||
seq2  TAAAAAGCAGAG-CCCATGACCTTCTCTCGCTCATTCTTCATTGCCCCTT  148

seq1  TTTGTACTCGTGCCCCCT-CCCCCCAAAAAAAACTAGAA-CTGCGCTGGA  196
      |||||||||||||||||| |||||||||||||||||||| ||||||||||
seq2  TTTGTACTCGTGCCCCCTCCCCCCCAAAAAAAACTAGAACCTGCGCTGGA  198

seq1  CTGGTATGATCTGTATGAAGGAGCCGCAATTCTAACACAACAAACATTTG  246
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTGGTATGATCTGTATGAAAGAGCCGCAATTCTAACACAACAAACATTTG  248

seq1  TAACTCCTTTTTAATAGTTTAGATAGAGCTTAGATGCTCTATTCTGGCCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCCTTTTTAATAGTTTAGATAGAGCTTAGATGCTCTATTCTGGCCT  298

seq1  TGATTGGGGCTCAAAGACATGTGACTGGCACACGTGCACACACAAACACA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGGGGCTCAAAGACATGTGACTGGCACACGTGCACACACAAACACA  348

seq1  CAAACAAAAGTAAAAATAAAACTTTTGAAAGGAAAG-AAGGGGTAGAAAG  395
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CAAACAAAAGTAAAAATAAAACTTTTGAAAGGAAAGAAAGGGGTAGAAAG  398

seq1  GGAAGGAGAAATGGGAAAGGTGAAGGGAAAGTGATGGAAAGAGGGAGGGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAGAAATGGGAAAGGTGAAGGGAAAGTGATGGAAAGAGGGAGGGA  448

seq1  GGAAGAGGAAGGAAGGATGGAAGGAAGAGGAAGGAAGAAATGAAGGAAGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGGAAGGAAGGATGGAAGGAAGAGGAAGGAAGAAATGAAGGAAGA  498

seq1  GAAGGAGGAAAGAAGAGAGGGAGGGAGAAAGGAAGGGAGGAAGGAAGAGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGGAAAGAAGAGAGGGAGGGAGAAAGGAAGGGAGGAAGGAAGAGA  548

seq1  GAGAAGAAGGGAGGGAGGGAAGAAGAGAGGGGGCAAAGAAGGGAGGAGGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAAGGGAGGGAGGGAAGAAGAGAGGGGGCAAAGAAGGGAGGAGGG  598

seq1  AAGAAGAGAGTGAAGGAGGAAGGAAGAGAGGGAGGAAGGGAGGGAGGGAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAGAGTGAAGGAGGAAGGAAGAGAGGGAGGAAGGGAGGGAGGGAG  648

seq1  GGAGGAAGAGGAAGGAAGTATAGTGGGAGAATCTTTGGTCATCACTGTTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAGAGGAAGGAAGTATAGTGGGAGAATCTTTGGTCATCACTGTTC  698

seq1  ACTGTCACACAGGAACAGCAGTAAGAGCAGGGAGCCGC  733
      ||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCACACAGGAACAGCAGTAAGAGCAGGGAGCCGC  736