BAC Information

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BAC

Clone NameB6Ng01-077P02
Chromosome4 (Build37)
Map Location 62,478,124 - 62,622,786
singlet/doubletdoublet
Overlap genenone
Upstream geneMup5, LOC435785, LOC667295, LOC100039305, LOC546832, OTTMUSG00000007485, Mup3, LOC100039345, OTTMUSG00000000231, Zfp37, Slc31a2, Fkbp15, Slc31a1, Cdc26, Prpf4, Rnf183, Wdr31, Bspry, Hdhd3, Alad, Pole3, 4933430I17Rik, Rgs3
Downstream geneZfp618, Ambp, Kif12, Col27a1, Orm1, Orm-ps, Orm3, Orm2, Akna, Whrn, Atp6v1g1, 6330416G13Rik, LOC670833, 1700018C11Rik, LOC667451, Tnfsf15, Tnfsf8, Rpl17-ps, Tnc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077P02.bB6Ng01-077P02.g
ACCDH893783DH893784
length1,220922
definitionDH893783|Mus musculus domesticus DNA, BAC clone: B6Ng01-077P02, 5' end.DH893784|Mus musculus domesticus DNA, BAC clone: B6Ng01-077P02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,621,552 - 62,622,786)(62,478,124 - 62,478,951)
sequence
gaattcaagggccagaagtaaaatgaagccagaacagactgggacacaag
tcccttgatatcctcagagagagagagagagagaatcagaaagaatcaga
aagaaagagagacacaatgagagagaattagaaagaaagagagacacaat
gagagagaatcagagagaaagaaagacacaatgaaagagagagagaaact
gtctttgcctctctgggttcacagtcaaaatggtcgcccacacgtctgct
tatgccaacaggtgctgacaggtatatttgggcaccactccaaactctaa
gagagactgtgattggccaggcctgactcaggtgtcactgggtgcaaacc
atccatgaccaaggagagggcagggccactcaatgcctacatcgtcctga
gacatcccctgaggaaggacgtggcactggacagacccatccagtgcacc
cttgtgaaggggctggagaactcccttagatgtccagtccagggctacta
cacagagttggtgctccccaaagctctcctgctggagcctgtctacattc
aggagttacggggctgagactctggaaacagtgaaggacatatgtcaagc
tcaccacaggtaggttttggaaatagacaagtcctacatagaacctggag
gcctggctaaagcctagtgggtgtgtcttggtgaggaaaactcccacgca
gcaaggctgaaggctgtgagacatggaacagaatggagacagagactagc
aaacagcttctggaatcaaagcctgaggaatgagagcaaccttcttggaa
aggaccaggaagggtgctggggaacctcacagcccagtctcatacatccc
ttaacaggttttcaaataagtgttttctgagcagatggaccacttatctg
aggtgagaagaggaggtatttgtccccattttaaagatggggaagctgag
gcacaagctctaaaacaaagaaaagcatgcagtagccagactgacttctg
cccaagtgccctgcttcttctctagaaccttcttttgactctgacagaaa
taaaccggttctttctaactcttgcattttcttctgggattttcttcttt
cttgtttttatccccctctttctcacctctatggggaagaggttcaaggg
ctggaaatcaacgtgtacttacttcttagtaaggcatcttgcaccatgga
aggagtttccaggtaacagg
gaattctccacactgatttccatactggcttcaccaacttgacatctttc
tggagtcagttgtctcctacttttaagggactcccaggatcagattcagg
ttcaggcttggcagcaagcaccattttgtactgagccaccctgcgggtcc
tgtgtagacatgtgttctttcttctgccttgaaaattatatggctaaatt
ccttgactaaagttttcatttcaggatcaatgttcttaagagacaggata
tctaccatgatatttaaaaaaataatttctatattttattgaaagtgata
tgtgctaatataattttcctaagtgtaaattgatacttacttcactgtat
aggtaagacgtcattcctatacattgctttggctctttggtaaggtttcc
tttagctcactggacattcttgcagtaattatgtaaataattatcctgaa
ggccttctcagggagggtctggagaatgcttcttaaggtatatagaccat
acttttttttttttttaaattcaggatcctaatattctttaagtacttga
aacttaaaataatataattcggcaactgtggagatcaagtgctttttccc
ttccaggctctgccattaaagtcgggttttgttcttttcttttgtgactt
tcagcttgttttgtttttaacttctcctttaaagtctgtgctccctttgg
tgtgtggtctttaaagtcgcggctcagctaccttagtaagtttagtcttt
tctgggacgcagatgtgcgtgctggcccgtgctttcccaactcagacaag
gcccgcaaccctcccatagccttcacttcttacatgagtgaagtctgagc
aatgtcccagtctcaggcatgtgagcagccctgcacgagtgcttgggtct
ctacattccctagctgacagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_62621552_62622786
seq2: B6Ng01-077P02.b_45_1264 (reverse)

seq1  CCTGTTTCCCTGGAAACTTCCCTACCATGGCTGCAAGGATGCCTTACTAG  50
      |||| || ||||||||||  ||| |||||| ||||| |||||||||||| 
seq2  CCTG-TTACCTGGAAACT--CCTTCCATGG-TGCAA-GATGCCTTACTAA  45

seq1  AAAGTAAGTTACCACTGGTTGATCT-CAGCCCCTTTTGAACTTCTTTCCC  99
       ||||||||    ||  |||||| | ||||||   |||||| || |||||
seq2  GAAGTAAGT----ACACGTTGATTTCCAGCCC---TTGAACCTC-TTCCC  87

seq1  CATAGAGGTGAGGAAAGAGGGGGATAAAAACAAGAAAGGAAGAAAATTCC  149
      ||||||||||| ||||||||||||||||||||||||| |||||||| |||
seq2  CATAGAGGTGA-GAAAGAGGGGGATAAAAACAAGAAA-GAAGAAAA-TCC  134

seq1  CAGA--GACATGCAAGAGGTTAGAAAGAACCGGTTTATTTCTGTCAGAGT  197
      ||||   | |||||||| ||||||||||||||||||||||||||||||||
seq2  CAGAAGAAAATGCAAGA-GTTAGAAAGAACCGGTTTATTTCTGTCAGAGT  183

seq1  CAAAAGAAGGTTCTAGAGAAGAAGCAGGGGCACTTGGGCAGAAGTCAGTC  247
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAAAAGAAGGTTCTAGAGAAGAAGCA-GGGCACTTGGGCAGAAGTCAGTC  232

seq1  TGGCTACTGCATGCTTTTCTTTGTTTTAGAGCTTGTGCCTCAGCTTCCCC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTACTGCATGCTTTTCTTTGTTTTAGAGCTTGTGCCTCAGCTTCCCC  282

seq1  ATCTTTAAAATGGGGACAAATACCTCCTCTTCTCACCTCAGATAAGTGGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTAAAATGGGGACAAATACCTCCTCTTCTCACCTCAGATAAGTGGT  332

seq1  CCATCTGCTCAGAAAACACTTATTTGAAAACCTGTTAAGGGATGTATGAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGCTCAGAAAACACTTATTTGAAAACCTGTTAAGGGATGTATGAG  382

seq1  ACTGGGCTGTGAGGTTCCCCAGCACCCTTCCTGGTCCTTTCCAAGAAGGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGCTGTGAGGTTCCCCAGCACCCTTCCTGGTCCTTTCCAAGAAGGT  432

seq1  TGCTCTCATTCCTCAGGCTTTGATTCCAGAAGCTGTTTGCTAGTCTCTGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCATTCCTCAGGCTTTGATTCCAGAAGCTGTTTGCTAGTCTCTGT  482

seq1  CTCCATTCTGTTCCATGTCTCACAGCCTTCAGCCTTGCTGCGTGGGAGTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTCTGTTCCATGTCTCACAGCCTTCAGCCTTGCTGCGTGGGAGTT  532

seq1  TTCCTCACCAAGACACACCCACTAGGCTTTAGCCAGGCCTCCAGGTTCTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCACCAAGACACACCCACTAGGCTTTAGCCAGGCCTCCAGGTTCTA  582

seq1  TGTAGGACTTGTCTATTTCCAAAACCTACCTGTGGTGAGCTTGACATATG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGACTTGTCTATTTCCAAAACCTACCTGTGGTGAGCTTGACATATG  632

seq1  TCCTTCACTGTTTCCAGAGTCTCAGCCCCGTAACTCCTGAATGTAGACAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCACTGTTTCCAGAGTCTCAGCCCCGTAACTCCTGAATGTAGACAG  682

seq1  GCTCCAGCAGGAGAGCTTTGGGGAGCACCAACTCTGTGTAGTAGCCCTGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGCAGGAGAGCTTTGGGGAGCACCAACTCTGTGTAGTAGCCCTGG  732

seq1  ACTGGACATCTAAGGGAGTTCTCCAGCCCCTTCACAAGGGTGCACTGGAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGACATCTAAGGGAGTTCTCCAGCCCCTTCACAAGGGTGCACTGGAT  782

seq1  GGGTCTGTCCAGTGCCACGTCCTTCCTCAGGGGATGTCTCAGGACGATGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTGTCCAGTGCCACGTCCTTCCTCAGGGGATGTCTCAGGACGATGT  832

seq1  AGGCATTGAGTGGCCCTGCCCTCTCCTTGGTCATGGATGGTTTGCACCCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTGAGTGGCCCTGCCCTCTCCTTGGTCATGGATGGTTTGCACCCA  882

seq1  GTGACACCTGAGTCAGGCCTGGCCAATCACAGTCTCTCTTAGAGTTTGGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACACCTGAGTCAGGCCTGGCCAATCACAGTCTCTCTTAGAGTTTGGA  932

seq1  GTGGTGCCCAAATATACCTGTCAGCACCTGTTGGCATAAGCAGACGTGTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGCCCAAATATACCTGTCAGCACCTGTTGGCATAAGCAGACGTGTG  982

seq1  GGCGACCATTTTGACTGTGAACCCAGAGAGGCAAAGACAGTTTCTCTCTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGACCATTTTGACTGTGAACCCAGAGAGGCAAAGACAGTTTCTCTCTC  1032

seq1  TCTTTCATTGTGTCTTTCTTTCTCTCTGATTCTCTCTCATTGTGTCTCTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCATTGTGTCTTTCTTTCTCTCTGATTCTCTCTCATTGTGTCTCTC  1082

seq1  TTTCTTTCTAATTCTCTCTCATTGTGTCTCTCTTTCTTTCTGATTCTTTC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTAATTCTCTCTCATTGTGTCTCTCTTTCTTTCTGATTCTTTC  1132

seq1  TGATTCTCTCTCTCTCTCTCTCTGAGGATATCAAGGGACTTGTGTCCCAG  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTCTCTCTCTCTCTCTCTGAGGATATCAAGGGACTTGTGTCCCAG  1182

seq1  TCTGTTCTGGCTTCATTTTACTTCTGGCCCTTGAATTC  1235
      ||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCTGGCTTCATTTTACTTCTGGCCCTTGAATTC  1220

seq1: chr4_62478124_62478951
seq2: B6Ng01-077P02.g_68_895

seq1  GAATTCTCCACACTGATTTCCATACTGGCTTCACCAACTTGACATCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCACACTGATTTCCATACTGGCTTCACCAACTTGACATCTTTC  50

seq1  TGGAGTCAGTTGTCTCCTACTTTTAAGGGACTCCCAGGATCAGATTCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCAGTTGTCTCCTACTTTTAAGGGACTCCCAGGATCAGATTCAGG  100

seq1  TTCAGGCTTGGCAGCAAGCACCATTTTGTACTGAGCCACCCTGCGGGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGCTTGGCAGCAAGCACCATTTTGTACTGAGCCACCCTGCGGGTCC  150

seq1  TGTGTAGACATGTGTTCTTTCTTCTGCCTTGAAAATTATATGGCTAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGACATGTGTTCTTTCTTCTGCCTTGAAAATTATATGGCTAAATT  200

seq1  CCTTGACTAAAGTTTTCATTTCAGGATCAATGTTCTTAAGAGACAGGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGACTAAAGTTTTCATTTCAGGATCAATGTTCTTAAGAGACAGGATA  250

seq1  TCTACCATGATATTTAAAAAAATAATTTCTATATTTTATTGAAAGTGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCATGATATTTAAAAAAATAATTTCTATATTTTATTGAAAGTGATA  300

seq1  TGTGCTAATATAATTTTCCTAAGTGTAAATTGATACTTACTTCACTGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTAATATAATTTTCCTAAGTGTAAATTGATACTTACTTCACTGTAT  350

seq1  AGGTAAGACGTCATTCCTATACATTGCTTTGGCTCTTTGGTAAGGTTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAGACGTCATTCCTATACATTGCTTTGGCTCTTTGGTAAGGTTTCC  400

seq1  TTTAGCTCACTGGACATTCTTGCAGTAATTATGTAAATAATTATCCTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTCACTGGACATTCTTGCAGTAATTATGTAAATAATTATCCTGAA  450

seq1  GGCCTTCTCAGGGAGGGTCTGGAGAATGCTTCTTAAGGTATATAGACCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCTCAGGGAGGGTCTGGAGAATGCTTCTTAAGGTATATAGACCAT  500

seq1  ACTTTTTTTTTTTTTTAAATTCAGGATCCTAATATTCTTTAAGTACTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTTTTTTTTTTAAATTCAGGATCCTAATATTCTTTAAGTACTTGA  550

seq1  AACTTAAAATAATATAATTCGGCAACTGTGGAGATCAGGTGCTTTTTCCC  600
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AACTTAAAATAATATAATTCGGCAACTGTGGAGATCAAGTGCTTTTTCCC  600

seq1  TTCCAGGCTCTGCCATTAGAGTCGGGTTTTGTTCTTTTCTTTTGTGACTT  650
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTCCAGGCTCTGCCATTAAAGTCGGGTTTTGTTCTTTTCTTTTGTGACTT  650

seq1  TCAGCTTGTTTTGTTTTTAACTTCTCCTTTAAGGTCTGTGCTCCCTTTGG  700
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCAGCTTGTTTTGTTTTTAACTTCTCCTTTAAAGTCTGTGCTCCCTTTGG  700

seq1  TGTGTGGTCTTTAAAGTCGCGGCTCAGCTACCTTAGTAAGTTTAGTCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGTCTTTAAAGTCGCGGCTCAGCTACCTTAGTAAGTTTAGTCTTT  750

seq1  TCTGGGACGCAGATGTGCGTGCTGGCCCGTGCTTTCCCAACTCAGACAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGACGCAGATGTGCGTGCTGGCCCGTGCTTTCCCAACTCAGACAAG  800

seq1  GCCCGCAACCCTCCCTTAGCCTTCACTT  828
      ||||||||||||||| ||||||||||||
seq2  GCCCGCAACCCTCCCATAGCCTTCACTT  828