BAC Information

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BAC

Clone NameB6Ng01-078A21
Chromosome4 (Build37)
Map Location 93,570,677 - 93,571,721
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC620269, LOC384125, Tusc1
Downstream gene5830433M19Rik, Plaa, LOC667250, Lrrc19, Ift74, Tek
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078A21.bB6Ng01-078A21.g
ACCDH893862DH893863
length1,0411,115
definitionDH893862|Mus musculus domesticus DNA, BAC clone: B6Ng01-078A21, 5' end.DH893863|Mus musculus domesticus DNA, BAC clone: B6Ng01-078A21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagggatcaaaaaagcatggaaatatttgaacgtcatgttgagtt
ggtatcagcttctggaacatcaaaagaatctcccatctcggctccatcgt
ttgtgcttgtgggatcatccaccacatccacaggggcaactggatcagga
cgctcattcttgcagcgtctcaccaatctctccggcacccaaagaggttc
cgtctggtcctgtggaaacacacaaacagaccctctcgcccatgtcaaca
cctgatctactcgatccccaggggggatggacacaatacctcgtggtgat
gagaccataacctcaatcacctgtgtgtccatctggggggtcaatataag
agtcaagttttcactagcttcccctctgttaggcaatgatttccatgccc
ttatagcaatctgattcacctgcttaaacacctgcactggatatcctgtc
tgttgttgtgcaaatcgaccttgatcaagcagcatatctctatcccatgc
aaattcagcttgatcagtgaaaataggacatcccagcaaggagaatctat
cctttttccagacctccggacagaaggtctgcccatagatggctgacgag
gaggcatagggagggggagcaaaagctaattcgccttcctcctccgcctc
agctcttttattttgtcctttctgtccacctgataacactgtgtctcctt
tctttttcctttttctttttaagcccttctcctcttccgacatactttct
tgttgctctgtaaggattttctgacctgtcttgactgcctctcgattcaa
acagtaacagagtccatatatcagaacaaacaagaccaaaactatcagac
ctacccacaaagggtcaatgggagaaaaaagcataactacacagcgagga
tctattgatcactacactgaggttatcatagttccttaacttgtccccaa
accgggaaccttacttgtcccaaaaccaggaaccttaacttgtcccaagc
ctgcttctggcaactttatattcgctctattttatccgagg
gaattcatttttttacactccatattccattccccgcccctcatcatcca
ccctctgattgctccacatcccacacctcctcaccaccccaccccatatc
caggtggatgccccacccccaccccacctgacctctaaactccctgggcc
tccagtctcttgagggttaggtgcttcatctctgaatgaacacagatgtg
gaagtcctctactgtacgtgtgttgggggcctcatatcagctggtgtatg
ctgtctgtttggtggtccagtgtttgagagatctctggggtccagattaa
ttgagactgctggtcctcctgcaggatcgcccttctcctcagcttctttc
agccttccttaattcaacaacaggggtcagctgcttttgtccactggttg
ggtgcaaataactgcatctgactctttcagctgcttgttgggtccttcgg
agggcagtcatgatagatcccgttttgtgagtattctataacatcagtaa
tagtgtcaggccctgggacctccccttgagctggatcccactttgggcct
atcgctggaccttcttctccttaggctcctctccatttccatccctgtaa
tttctttcagacagaaacaattatggatcagaagtatgactgtgggatgg
caaccccacaaatgtcctgccttcccgctggaggtgggctccacaaattc
cctctcctcactgttgggcacttcatcaaaggtccctccctatgagtcct
gggagtcactcacctcccaggtctttggtacaacctcctatttcctgagg
ttgcctgttttcattgtttctgctgggcactcagggcttcttgttcgttt
tccctcacccaatatcagatcatgttcccctctaccccccactgccctgc
caccctgtccatattctctcccaagtccctccctcactccctcctcactt
gtgattgctttctctctctcccaagtgggactgaggcatactccttgggc
acttcagcttgtggagccttttgaatctgtggactatatctgggtattca
gatgtttttccctatgcttaataatttagttaagttaattaattaattta
tttacttatgggcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_93570677_93571721
seq2: B6Ng01-078A21.b_37_1077

seq1  GAATTCAGGGATCAAAAAAGCATGGAAATATTTGAACGTCATGTTGAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGATCAAAAAAGCATGGAAATATTTGAACGTCATGTTGAGTT  50

seq1  GGTATCAGCTTCTGGAACATCAAAAGAATCTCCCATCTCGGCTCCATCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCAGCTTCTGGAACATCAAAAGAATCTCCCATCTCGGCTCCATCGT  100

seq1  TTGTGCTTGTGGGATCATCCACCACATCCACAGGGGCAACTGGATCAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTTGTGGGATCATCCACCACATCCACAGGGGCAACTGGATCAGGA  150

seq1  CGCTCATTCTTGCAGCGTCTCACCAATCTCTCCGGCACCCAAAGAGGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCATTCTTGCAGCGTCTCACCAATCTCTCCGGCACCCAAAGAGGTTC  200

seq1  CGTCTGGTCCTGTGGAAACACACAAACAGACCCTCTCGCCCATGTCAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTGGTCCTGTGGAAACACACAAACAGACCCTCTCGCCCATGTCAACA  250

seq1  CCTGATCTACTCGATCCCCAGGGGGGATGGACACAATACCTCGTGGTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATCTACTCGATCCCCAGGGGGGATGGACACAATACCTCGTGGTGAT  300

seq1  GAGACCATAACCTCAATCACCTGTGTGTCCATCTGGGGGGTCAATATAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCATAACCTCAATCACCTGTGTGTCCATCTGGGGGGTCAATATAAG  350

seq1  AGTCAAGTTTTCACTAGCTTCCCCTCTGTTAGGCAATGATTTCCATGCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGTTTTCACTAGCTTCCCCTCTGTTAGGCAATGATTTCCATGCCC  400

seq1  TTATAGCAATCTGATTCACCTGCTTAAACACCTGCACTGGATATCCTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGCAATCTGATTCACCTGCTTAAACACCTGCACTGGATATCCTGTC  450

seq1  TGTTGTTGTGCAAATCGACCTTGATCAAGCAGCATATCTCTATCCCATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTGTGCAAATCGACCTTGATCAAGCAGCATATCTCTATCCCATGC  500

seq1  AAATTCAGCTTGATCAGTGAAAATAGGACATCCCAGCAAGGAGAATCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAGCTTGATCAGTGAAAATAGGACATCCCAGCAAGGAGAATCTAT  550

seq1  CCTTTTTCCAGACCTCCGGACAGAAGGTCTGCCCATAGATGGCTGACGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTCCAGACCTCCGGACAGAAGGTCTGCCCATAGATGGCTGACGAG  600

seq1  GAGGCATAGGGAGGGGGAGCAAAAGCTAATTCGCCTTCCTCCTCCGCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATAGGGAGGGGGAGCAAAAGCTAATTCGCCTTCCTCCTCCGCCTC  650

seq1  AGCTCTTTTATTTTGTCCTTTCTGTCCACCTGATAACACTGTGTCTCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTTTATTTTGTCCTTTCTGTCCACCTGATAACACTGTGTCTCCTT  700

seq1  TCTTTTTCCTTTTTCTTTTTAAGCCCTTCTCCTCTTCCGACATACTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTCCTTTTTCTTTTTAAGCCCTTCTCCTCTTCCGACATACTTTCT  750

seq1  TGTTGCTCTGTAAGGATTTTCTGACCTGTCTTGACTGCCTCTCGATTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTCTGTAAGGATTTTCTGACCTGTCTTGACTGCCTCTCGATTCAA  800

seq1  ACAGTAACAGAGTCCATATATCAGAACAAACAAGACCAAAACTATCAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAACAGAGTCCATATATCAGAACAAACAAGACCAAAACTATCAGAC  850

seq1  CTACCCACAAAGGGTCAATGGGAGAAAAAAGCATAACTACACAGCGAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCACAAAGGGTCAATGGGAGAAAAAAGCATAACTACACAGCGAGGA  900

seq1  TCTATTGATCACTACACTGAGGTTATCATAGTTCCTTAACTTGTCCCCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTGATCACTACACTGAGGTTATCATAGTTCCTTAACTTGTCCCCAA  950

seq1  ACCGGGAACCTTAACTTGTCCCAAAACCAGGAACCTTAACTTGTCCCAAA  1000
      |||||||||||| |||||||||||||||||||||||||||||||||| ||
seq2  ACCGGGAACCTT-ACTTGTCCCAAAACCAGGAACCTTAACTTGTCCC-AA  998

seq1  GCCTGCTTCCTGGCAACTTTATATTCGCCTCTATTTTATCCGAGG  1045
      |||||||| |||||||||||||||||| |||||||||||||||||
seq2  GCCTGCTT-CTGGCAACTTTATATTCG-CTCTATTTTATCCGAGG  1041