BAC Information

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BAC

Clone NameB6Ng01-078I14
Chromosome4 (Build37)
Map Location 49,970,481 - 49,971,283
singlet/doubletsinglet
Overlap genenone
Upstream geneE130309F12Rik, LOC666602, Rbpsuh-ps1, C730036D15Rik, LOC100040919, LOC666617, Rbpsuh-ps2, LOC230161, Baat, Mrpl50, Zfp189, Aldob, 2810432L12Rik, LOC100040742, Rnf20, Ppp3r2
Downstream geneLOC666663, LOC100040979
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078I14.bB6Ng01-078I14.g
ACCDH894205DH894206
length8001,184
definitionDH894205|Mus musculus domesticus DNA, BAC clone: B6Ng01-078I14, 5' end.DH894206|Mus musculus domesticus DNA, BAC clone: B6Ng01-078I14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcactaagttaaagtttgctcctttatcctttggagtaaatacc
aatgataggttccattgtgaagggttccaaattcactcacttatgctgac
aataaaaggattaatctagtggcccaacaaagaacaaaaagccagcccac
aggctgacttacttttggtaggacattctcgcttccgtcctatgaagaaa
tattgcaaagctcaaccattagcgattggatgattccagcaggtaaaaga
caaacaagcttagtgaaagtgttaagtttctgggttttatctgaaactaa
ataagaaggaaaaaaatcagcttgaatataaactagacacctcctttagc
agccaactcctcagcgaggactgggtctcatgaggccctcccagaccgca
ttggatagttgattggattcatcttgtgtagttcctgtgcaggcaatcac
tgttgctgggaattgatgacagcaagacccatgccatacccataagcctc
ctcttctgtgaagctcccataatatttctccttccacttgtgtgcatgtg
catctgcctgtgtgtgtgtctgatacacatgttccagttaagccagatgt
tccagttaagccagatgttcagttaagggccagcatctcacctcacatat
tctcggaatttcatgagctgtgtctatatatgaatcatcactccctgcat
aacaagatactctgatgaacggtgagggataagaaaaggctgttgattaa
tggtgtaaggataaatactagaagggagcttgccccttttttcccttagc

gaattctcacctgagaaatacggaatggccgataagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaacctgagat
tccacttcactccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattattggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggtttctca
gaaaattggacatagtactaccggaggatcctgcaatacctctcctgggc
atatatccagaagatgtctcaaccggtaaaaaggacacatgctctactat
gttcatagcaaccttatttataatagctggaaagaacccagatgtccctc
aacagaggaatggatacagaaaatgtggtacatttacacaatggagtact
acattgctattaaaaagaatgaatttatgaaattcctagctaaatggatg
gacctggagggcatcatcctgagtgaggtaacacaatcacaaaggaactc
acacaatatatactcactgataagtggatattagcccaaaacttaggata
cccaagatataagatacaatttgctaaacgcatgaaactcagaaagaacg
aagaccaaagtggggacacttttgccccttcttagaaatgggaacaaaac
acccatggaaggagttacagagacaatgtttggatctctgacgaaaggat
ggaccatctagttgattgccatatgcagggatccatcccataatcagctt
ccaaaatgctgacaccattgcatacactagcaagattttgctgaaaggac
ccagatatagctgttctcttgtgagcctatgcccagacctagcaaacaca
gaagtggatgatcagagtcaggttattgggatggatcacaagtcccccaa
tggagagctagagtaagtatccatgaagctaaaggaacttgcaccctata
gttggaacaacaatatgaactaactgtacccgggactcttgtctctagct
tctatgtatcaaaattgggctagtttgcatcctgtcaaagaaggcccatt
gaactttgcaaactttttatgccccagtgatagggtacccagtgccaaaa
gggtggaagttgctggggctatgggataattgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_49970481_49971283
seq2: B6Ng01-078I14.b_31_830

seq1  GAATTCTCACATAATTTAGAGTTTGCTCTTATATCCTTTGGAGTAAATAC  50
      |||||||||| ||| ||| ||||||||| | |||||||||||||||||||
seq2  GAATTCTCAC-TAAGTTAAAGTTTGCTCCTTTATCCTTTGGAGTAAATAC  49

seq1  CAATGATAGGTTCCATTGTGAAGGGTTCCAAATTCACTCAGTTATGCTGA  100
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CAATGATAGGTTCCATTGTGAAGGGTTCCAAATTCACTCACTTATGCTGA  99

seq1  CAATAAGAGGATTAATCTAGTGGCCCAACAAAGAAGAAAAATCCAGCCCA  150
      |||||| |||||||||||||||||||||||||||| ||||| ||||||||
seq2  CAATAAAAGGATTAATCTAGTGGCCCAACAAAGAACAAAAAGCCAGCCCA  149

seq1  GAGGCTGACATAGTTTTGGTAGGACATTCTTGCTTCCATCCTATGAAGAA  200
       |||||||| || ||||||||||||||||| |||||| ||||||||||||
seq2  CAGGCTGACTTACTTTTGGTAGGACATTCTCGCTTCCGTCCTATGAAGAA  199

seq1  ATATTGCAAAGCTCAACCATTAGCGATTGGATGATTCTAGCAGGTAAGAG  250
      ||||||||||||||||||||||||||||||||||||| ||||||||| ||
seq2  ATATTGCAAAGCTCAACCATTAGCGATTGGATGATTCCAGCAGGTAAAAG  249

seq1  ACAAAGAAGCTTAGTGAGAGTGTTAAGTTTCTGGGTTTTATCTGAAACTA  300
      ||||| ||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACAAACAAGCTTAGTGAAAGTGTTAAGTTTCTGGGTTTTATCTGAAACTA  299

seq1  AATAAGAAGGAAAAAAATCAGCTTGAATATAAACTAGACACCTCCTTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGAAGGAAAAAAATCAGCTTGAATATAAACTAGACACCTCCTTTAG  349

seq1  CAGCCAACTCCTCAGCGAGGACTGGGTCTCATGAGGCCCTCCCAGACCGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAACTCCTCAGCGAGGACTGGGTCTCATGAGGCCCTCCCAGACCGC  399

seq1  ATTGGATAGTTGATTGGATTCATCTTGTGTAGTTCCTGTGCAAGCAATCA  450
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATTGGATAGTTGATTGGATTCATCTTGTGTAGTTCCTGTGCAGGCAATCA  449

seq1  CTGTTGCTGTGAATTGATGACAGCAAGACCCATGTCATACCCATAAGCCT  500
      ||||||||| |||||||||||||||||||||||| |||||||||||||||
seq2  CTGTTGCTGGGAATTGATGACAGCAAGACCCATGCCATACCCATAAGCCT  499

seq1  CCTCTTCTGTGATGCTCCCTTAATATTTCTCCTTCCTCTTGTGTGCATGT  550
      |||||||||||| |||||| |||||||||||||||| |||||||||||||
seq2  CCTCTTCTGTGAAGCTCCCATAATATTTCTCCTTCCACTTGTGTGCATGT  549

seq1  GCATCTGCCTGTGTGTGTGTCTGATACAGATGTTCCAGTTAAGCCAGATG  600
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GCATCTGCCTGTGTGTGTGTCTGATACACATGTTCCAGTTAAGCCAGATG  599

seq1  TTCCAGTTAAGCCAGATGTTCCAGTTAAGGCAGAGCATCTCAAGTCACTT  650
      |||||||||||||||||||| |||||||||   |||||||||  |||| |
seq2  TTCCAGTTAAGCCAGATGTT-CAGTTAAGGGCCAGCATCTCACCTCACAT  648

seq1  ATTCTCTGAATTTGATGAGCTGTGTCTATATATTAATCATCACTCCCTGC  700
      |||||| |||||| ||||||||||||||||||| ||||||||||||||||
seq2  ATTCTCGGAATTTCATGAGCTGTGTCTATATATGAATCATCACTCCCTGC  698

seq1  ATAAGAAGATTCTCTGATGAAGGGTGAGGGATAAGAAAGGTCTGTTGATT  750
      |||| ||||| |||||||||| |||||||||||||||| | |||||||||
seq2  ATAACAAGATACTCTGATGAACGGTGAGGGATAAGAAAAGGCTGTTGATT  748

seq1  AATGGTGTAAGGATAAGTATTTAGAAGGGAGCTTGGTACTTTATTCCCTT  800
      |||||||||||||||| ||  ||||||||||||||   |||| |||||||
seq2  AATGGTGTAAGGATAAATA-CTAGAAGGGAGCTTGCCCCTTTTTTCCCTT  797

seq1  AGC  803
      |||
seq2  AGC  800