BAC Information

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BAC

Clone NameB6Ng01-080G11
Chromosome4 (Build37)
Map Location 94,477,800 - 94,478,974
singlet/doubletsinglet
Overlap geneTek
Upstream gene5830433M19Rik, Plaa, LOC667250, Lrrc19, Ift74
Downstream gene4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun, LOC100042411, 2310009E04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080G11.bB6Ng01-080G11.g
ACCDH895555DH895556
length1,1661,172
definitionDH895555|Mus musculus domesticus DNA, BAC clone: B6Ng01-080G11, 5' end.DH895556|Mus musculus domesticus DNA, BAC clone: B6Ng01-080G11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctagaaacaagattgactaaactttaaatctcagtaaatctca
taaatggcacactattgtatacaattcagcaaagttgatagatagtatgg
aaggagactaaaactggccatcgagagccttagttttctcttttcctctg
tactaagtttatgacatctttgtttccagcatgcccatctggttactacg
gaccagactgtaagctcaggtgccactgtaccaatgaagagatatgtgat
cggttccaaggatgcctctgctctcaaggatggcaagggctgcagtgtga
gaaagaaggtaaagcaaggtaacactgtggtcagggtcatgttcagcatg
tctggagagaaccctactggtgtaagtcttaccctggcatgctaacatcc
tctagctatctcttacacacacacacacacacacacacacacacacacac
acacacaccaaaataaaacaacaaatagcattctacttcttcctaaggct
ctgtagtagcttcttttctattgctgtgatatgacaacatgaccaagaca
acttataaaagatgatgtttaatctagcttatggttccagagggttagag
tctctgatggcaaaagaaagtcttggctatagatagttggagtagcagtt
gagagctattgtcttgatccacaaggaggaggtagagacaacagggtggg
gtgaacagaaagaggagaaaacactggagatgtctcagaggcttttaaaa
cctcaaagccattcccagtgacacatttcctctgacatcttctagacacc
catgccaaactggacacccctctcagagatcccaacctctaatataactg
attcagatgtcctcttcctctttgagctgttcccctctctttaaccgaaa
tgtttaagagactttctaggaaatgcgaactagaacactaactctaatcc
tgacactcttaatccttctcaaacagtttcacaactagagtgaaacatct
gaatcgatggggtcattcacatccacacgagcaccggtgcctcgaagtac
ctcacttctggataaaccgaatgcctgctgagaatctcatagaactacac
attaaaaccctgacacataaaacaccgtgcacataaaatattagacctga
gggacgtgatacagat
gaattctttgtttagctctgtacccaatttttaatagggttatttggttc
tctggagactaacttcttcagttctttgtatatattggatattagccctc
tatcagatgtaggattggtaaagatcttttcccaatctgttggtcaccat
tttgccctattgacagtgtcctttgccttacagaagctttgtaattttac
gaggtcccatttgtcagttcttgatcttagagcataagctattggtgttc
tgttcaggaaaataagtttgggtatattgtggcttcattttcattaaatt
ccaaaaagtctttaatttctttctttatttctcccttgaccaagttatca
ctgagtagagtattgttcagcttccacgtgtatgtgggatttctattgtt
tatgttcttattgaagaccagccttagaccatggtgatctgatagcatgc
atgggattatttcaatcttcttgtgtctgttgaggcctgttttgtaaccg
attataggtcaattttggagaaggtactgtgaggtgtgcgaagaagatat
attcttttgttttagggtaaaatgttctatagatatctgttaaatccatt
tgtttcataacttctgttagtttcaccatttctctgtttagtttctgttt
ccattgctgagagtcgggtgttccattgctgaagtctcccactattattg
tgtgtggtgcaatgtgtgcttttgagaattaaaaaaagtttcttttatga
acgtgggtgcccatgggttggagagatggctcagacagttaagagcacca
actgctcttccaaaggtcctgagttcaaatcccagcaaccacatggtggc
tcacaaccatccctaacaagatctgacaccctcttcatataacaaaaaaa
ttaaatatttttaaaaattaatgtgggtgcccttgcattggagcatagat
gttcagatagagagtcttctcagagatttttcctttgatagatgagtgtc
cttctggtcatttgataccttaggttgaaagtccattttattcatattag
attgctactttcaccttgttcttgagaaattgtttccagcctttcctgga
gaattgtctacttgtaagaaggcgtatctgatgtagcaaacagagccgtt
tagtacctctcgtgtactcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_94477800_94478974
seq2: B6Ng01-080G11.b_48_1213

seq1  GAATTCTCTAGAAACAAGATTGACTAAACTTTAAATCTCAGTAAATCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAGAAACAAGATTGACTAAACTTTAAATCTCAGTAAATCTCA  50

seq1  TAAATGGCACACTATTGTATACAATTCAGCAAAGTTGATAGATAGTATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGCACACTATTGTATACAATTCAGCAAAGTTGATAGATAGTATGG  100

seq1  AAGGAGACTAAAACTGGCCATCGAGAGCCTTAGTTTTCTCTTTTCCTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGACTAAAACTGGCCATCGAGAGCCTTAGTTTTCTCTTTTCCTCTG  150

seq1  TACTAAGTTTATGACATCTTTGTTTCCAGCATGCCCATCTGGTTACTACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGTTTATGACATCTTTGTTTCCAGCATGCCCATCTGGTTACTACG  200

seq1  GACCAGACTGTAAGCTCAGGTGCCACTGTACCAATGAAGAGATATGTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGACTGTAAGCTCAGGTGCCACTGTACCAATGAAGAGATATGTGAT  250

seq1  CGGTTCCAAGGATGCCTCTGCTCTCAAGGATGGCAAGGGCTGCAGTGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTCCAAGGATGCCTCTGCTCTCAAGGATGGCAAGGGCTGCAGTGTGA  300

seq1  GAAAGAAGGTAAAGCAAGGTAACACTGTGGTCAGGGTCATGTTCAGCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAGGTAAAGCAAGGTAACACTGTGGTCAGGGTCATGTTCAGCATG  350

seq1  TCTGGAGAGAACCCTACTGGTGTAAGTCTTACCCTGGCATGCTAACATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGAGAACCCTACTGGTGTAAGTCTTACCCTGGCATGCTAACATCC  400

seq1  TCTAGCTATCTCTTACACACACACACACACACACACACACACACACACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTATCTCTTACACACACACACACACACACACACACACACACACAC  450

seq1  ACACACACCAAAATAAAACAACAAATAGCATTCTACTTCTTCCTAAGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACCAAAATAAAACAACAAATAGCATTCTACTTCTTCCTAAGGCT  500

seq1  CTGTAGTAGCTTCTTTTCTATTGCTGTGATATGACAACATGACCAAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTAGCTTCTTTTCTATTGCTGTGATATGACAACATGACCAAGACA  550

seq1  ACTTATAAAAGATGATGTTTAATCTAGCTTATGGTTCCAGAGGGTTAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATAAAAGATGATGTTTAATCTAGCTTATGGTTCCAGAGGGTTAGAG  600

seq1  TCTCTGATGGCAAAAGAAAGTCTTGGCTATAGATAGTTGGAGTAGCAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGATGGCAAAAGAAAGTCTTGGCTATAGATAGTTGGAGTAGCAGTT  650

seq1  GAGAGCTATTGTCTTGATCCACAAGGAGGAGGTAGAGACAACAGGGTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTATTGTCTTGATCCACAAGGAGGAGGTAGAGACAACAGGGTGGG  700

seq1  GTGAACAGAAAGAGGAGAAAACACTGGAGATGTCTCAGAGGCTTTTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACAGAAAGAGGAGAAAACACTGGAGATGTCTCAGAGGCTTTTAAAA  750

seq1  CCTCAAAGCCATTCCCAGTGACACATTTCCTCTGACATCTTCTAGACACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAAGCCATTCCCAGTGACACATTTCCTCTGACATCTTCTAGACACC  800

seq1  CATGCCAAACTGGACACCCCTCTCAGAGATCCCAACCTCTAATATAACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCAAACTGGACACCCCTCTCAGAGATCCCAACCTCTAATATAACTG  850

seq1  ATTCAGATGTCCTCTTCCTCTTTGAGCTGTTCCCCTCTCTTTAACCGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATTCAGATGTCCTCTTCCTCTTTGAGCTGTTCCCCTCTCTTTAACCG-AA  899

seq1  ATGTTTAAGAGACTTTCTAGGAAATGCGAACTAGAACACTAACTTCTAAT  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATGTTTAAGAGACTTTCTAGGAAATGCGAACTAGAACACTAAC-TCTAAT  948

seq1  CCTGACACTCTTAATCCTTCTCAAACAGTTTCACAACTTAGAGTGAAACA  1000
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCTGACACTCTTAATCCTTCTCAAACAGTTTCACAAC-TAGAGTGAAACA  997

seq1  TCTGAATCGATGGGGTCATTCACATCCACACGAGCACCGGTGCCTCAGAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||  ||
seq2  TCTGAATCGATGGGGTCATTCACATCCACACGAGCACCGGTGCCTCGAAG  1047

seq1  TACCCTCACTTCTGAATAAACCGAATGCCTGCTGAGATCTTCATAGACAT  1100
      || ||||||||||| ||||||||||||||||||||||   |||||||  |
seq2  TA-CCTCACTTCTGGATAAACCGAATGCCTGCTGAGAATCTCATAGAACT  1096

seq1  ACACATAAAAACACTGGAACACATAAAACACCCGTGCACATAAAATATTA  1150
      |||||| ||||| |||  |||||||||||| |||||||||||||||||||
seq2  ACACATTAAAACCCTG--ACACATAAAACA-CCGTGCACATAAAATATTA  1143

seq1  GACCTGAGGAGCATGTAATACAGAT  1175
      ||||||||  | | || ||||||||
seq2  GACCTGAG--GGACGTGATACAGAT  1166