BAC Information

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BAC

Clone NameB6Ng01-080O02
Chromosome4 (Build37)
Map Location 119,128,601 - 119,129,714
singlet/doubletsinglet
Overlap genenone
Upstream geneMpl, Tie1, LOC545675, LOC666596, 2610528J11Rik, 6330530A05Rik, 1110020C03Rik, Ebna1bp2, LOC100041290, Olfr62, Olfr1343-ps1, Olfr1342, Olfr1341, Olfr1340, Olfr1339, Olfr1338, Olfr1524-ps1, Olfr1337, Olfr219-ps1, GA_x5J8B7W3BSW-40181-41086, Olfr1335, Olfr1333, GA_x5J8B7TQTH0-2-774, Olfr1332-ps1, Olfr1331, Olfr1330, Olfr1329, Olfr1519, Lao1, LOC666703, OTTMUSG00000008833, Slc2a1, Zfp691, Ermap, Ccdc23, 4930538K18Rik, AU022252, Lepre1, Cldn19, Ybx1, Ppih, 1700041C02Rik, Ldha-ps2, LOC100041471, Ppcs, Zmynd12
Downstream geneBC057371, LOC666766, LOC384052, AA415398, Foxj3, Guca2a, Guca2b, Hivep3, Edn2, Foxo6, Scmh1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080O02.bB6Ng01-080O02.g
ACCDH895894DH895895
length1,093936
definitionDH895894|Mus musculus domesticus DNA, BAC clone: B6Ng01-080O02, 5' end.DH895895|Mus musculus domesticus DNA, BAC clone: B6Ng01-080O02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctatgaagactagactggcctcagattcacaaagatctctttt
gtgagtactggggttaaaggcacgtgccagcacactgggccccaaaataa
atctttaaaaaaaacaaaaaacaaacaaacaacaacaaaacaagggctgg
agagatggttcagtggttaagagcactgactgctcttccagaggtcctga
gttcaattcccagcaaccacatggtggctcacagccatctgtgatgagga
tccgatgccctcttctggtgtgcctgaagacaatgatagtgtactcacat
acatgaaataaataaataaataaatctttaaaaaaacaaacccttaaaca
taatcatttctcctgcaacatacaaagtctttacaatctctgagccacat
ttaccacctcacaacttgtatactgatatttaatttaattaatcttaaac
ccacagccttattattattttataaagtccccatattcttagttttcctg
ctttctgcctaggttcacattgctgatgaatcatttagtatttcccataa
tgaggtctctgagggcaaattcataggtttcctttattaatctgaaagtg
ggtttttttttttttttttttttgctttttcgagacagggtttctctgta
tagccctggctgtcctggaattcactttgtagatcaggctggcctcgaac
tcagaaatccgcctgcctctgcctcccgagtgctgggattaaaggcgtga
gtcatcaccgcctggctgtctgaaagtgttttttgtttgccattcttttt
ggggtcctcagtgaagatgcgctttatcttcgtgtgtgatatgctgatac
ctaaaacaatcccaattcccaagagcttgtcaaggaggtttacttgaccc
caaagactataccaggttaaaagatgatacagggacttcatggcatggct
tagtttccacaggcagcatgtcattccattgcattaaatcttcacagtga
aaattcatgttttcaggcagggctgaagtattacccttgaagccaaagcg
ccgggtgggttggcattcttttctgtgtagacacactgaaggt
gaattctctgaaatcagagagggaaatttcatttgcaatagtttccaaaa
aaaaaaaaaagaaaagaaaaagaaaaagtccctaggaggtgaaagacccc
cacaatgaaaactttaagctactgaaaaaagaaattaaagaagaccgtag
aggatgcaaagagcttccgagctcgtgggctgtcaggatcaatgtcagga
agatgtttgcatgactgagcccaatccagactcagtgtaagaccatgaaa
atcccagtgggattccaccgtgaactagaaaaaaaaatcctaaaattcat
atggaagtaaaatcgatccttagcagacagcagcgcaggagggaccacaa
tgcctgatctggaattatattacagagccatagtaacgagcagtgtaatg
ctggcacaaaaaccaatccagaccagtgagccccatggagtgtccagcac
aaaactcatacagtgagagatgcctaaagttgtcaaaacatacactggag
aaaactcagcttccttggcaccgggttgctgggaaaagtgaaaccagacc
catcgctctcttgcccggcacagcaatgaagtcaaagtggatgggagatc
ctaatggaagtcctgaaattctgaaactgtgtgaggacatgagatgatta
aaccattttaagatagcaaaggggactccaccagcacaggaaataattct
aacaacctgcaaatggggttcagatggaaaaggcttaattcatgaagcca
agatgcttttgcatcgacaacagcctgagtgaagagacagaggggggggg
gagctatctgctcatcacatagggtattaatgtacaggagaatgcacaac
tgtaaaaactgaacacttaactaggtgaactctggaggagtatatatgtg
gatctctgtgagtttgagaccagccaggtctatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_119128601_119129714
seq2: B6Ng01-080O02.b_46_1138

seq1  GAATTCTCTATGAAGACTAGACTGGCCTCAGATTCACAAAGATCTCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATGAAGACTAGACTGGCCTCAGATTCACAAAGATCTCTTTT  50

seq1  GTGAGTACTGGGGTTAAAGGCACGTGCCAGCACACTGGGCCCCAAAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTACTGGGGTTAAAGGCACGTGCCAGCACACTGGGCCCCAAAATAA  100

seq1  ATCTTTAAAAAAAACAAAAAACAAACAAACAACAACAAAACAAGGGCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTAAAAAAAACAAAAAACAAACAAACAACAACAAAACAAGGGCTGG  150

seq1  AGAGATGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGA  200

seq1  GTTCAATTCCCAGCAACCACATGGTGGCTCACAGCCATCTGTGATGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATTCCCAGCAACCACATGGTGGCTCACAGCCATCTGTGATGAGGA  250

seq1  TCCGATGCCCTCTTCTGGTGTGCCTGAAGACAATGATAGTGTACTCACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGATGCCCTCTTCTGGTGTGCCTGAAGACAATGATAGTGTACTCACAT  300

seq1  ACATGAAATAAATAAATAAATAAATCTTTAAAAAAACAAACCCTTAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAATAAATAAATAAATAAATCTTTAAAAAAACAAACCCTTAAACA  350

seq1  TAATCATTTCTCCTGCAACATACAAAGTCTTTACAATCTCTGAGCCACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCATTTCTCCTGCAACATACAAAGTCTTTACAATCTCTGAGCCACAT  400

seq1  TTACCACCTCACAACTTGTATACTGATATTTAATTTAATTAATCTTAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCACCTCACAACTTGTATACTGATATTTAATTTAATTAATCTTAAAC  450

seq1  CCACAGCCTTATTATTATTTTATAAAGTCCCCATATTCTTAGTTTTCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCCTTATTATTATTTTATAAAGTCCCCATATTCTTAGTTTTCCTG  500

seq1  CTTTCTGCCTAGGTTCACATTGCTGATGAATCATTTAGTATTTCCCATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGCCTAGGTTCACATTGCTGATGAATCATTTAGTATTTCCCATAA  550

seq1  TGAGGTCTCTGAGGGCAAATTCATAGGTTTCCTTTATTAATCTGAAAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCTCTGAGGGCAAATTCATAGGTTTCCTTTATTAATCTGAAAGTG  600

seq1  GGTTTTTTTTTTTTTTTTTTTTTGCTTTTTCGAGACAGGGTTTCTCTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTTTTTTTTTTTTTTTTGCTTTTTCGAGACAGGGTTTCTCTGTA  650

seq1  TAGCCCTGGCTGTCCTGGAATTCACTTTGTAGATCAGGCTGGCCTCGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCTGGCTGTCCTGGAATTCACTTTGTAGATCAGGCTGGCCTCGAAC  700

seq1  TCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGA  750

seq1  GTCATCACCGCCTGGCTGTCTGAAAGTGTTTTTTGTTTGCCATTCTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCACCGCCTGGCTGTCTGAAAGTGTTTTTTGTTTGCCATTCTTTTT  800

seq1  GGGGTCCTCAGTGAAGATGCGCTTTATCTTCGTGTGTGATATGCTGATAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCCTCAGTGAAGATGCGCTTTATCTTCGTGTGTGATATGCTGATAC  850

seq1  CTAAAACAATCCCAATTCCCAAGAGCTTTGTCAAAGGAGGTTTACTTGAC  900
      |||||||||||||||||||||||||| ||||| |||||||||||||||||
seq2  CTAAAACAATCCCAATTCCCAAGAGC-TTGTC-AAGGAGGTTTACTTGAC  898

seq1  CCCAAAGACTATACCAGGTTAAAAAGATGATACAGGGACTTCATGGCATG  950
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCCAAAGACTATACCAGGTT-AAAAGATGATACAGGGACTTCATGGCATG  947

seq1  GCTAAGTTTCCCAACAGGCCAGCATGTCATTCCATTGCATTAAAATCTTC  1000
      ||| |||||||  ||||| |||||||||||||||||||||| ||||||||
seq2  GCTTAGTTTCC--ACAGG-CAGCATGTCATTCCATTGCATT-AAATCTTC  993

seq1  ACAGTGAAAATTCATGTTTTCAAGGGCAGGGCTGAGGTATTACCCTTGAA  1050
      ||||||||||||||||||||||  ||||||||||| ||||||||||||||
seq2  ACAGTGAAAATTCATGTTTTCA--GGCAGGGCTGAAGTATTACCCTTGAA  1041

seq1  AGCCCAAAGGCGGCCCGGGGTGGGGTGGGGCATTCTTTCTCTGTTGTAAG  1100
         |||||    || | ||||||| |  |||||||||| |||| ||||  
seq2  --GCCAAA----GCGCCGGGTGGGTT--GGCATTCTTT-TCTG-TGTA--  1079

seq1  CACACACTGGAGGT  1114
       |||||||| ||||
seq2  GACACACTGAAGGT  1093