MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-081O15
Chromosome	4 (Build37)
Map Location	105,710,261 - 105,886,903
singlet/doublet	doublet
Overlap gene	Map1lc3, LOC384039
Upstream gene	Prkaa2, LOC100039513, Ppap2b, LOC433742, LOC665518, LOC434381, Ppia-ps4_954.1
Downstream gene	Usp24, LOC100039616, Pcsk9, Bsnd, Tmem61, Dhcr24, BC055111, Ttc22, Pars2, Ttc4, Gm1027, BC026682, Acot11, Ssbp3, Mrpl37, 2810410C14Rik, Cdcp2, 2210012G02Rik, Tmem59, LOC546840
Link	Open Mouse BAC browser

Click to get alignment info.

name	Prkaa2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108079 MGI:1336173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039513 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039513
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Ppap2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67916 MGI:1915166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC433742 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433742
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 39 ESTs, 13 Proteins pseudo : _no_value

name	LOC665518 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC434381 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434381
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 mRNAs, 651 ESTs pseudo : _no_value

name	Ppia-ps4_954.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:269569
definition	note : peptidyl-prolyl cis-trans isomerase A pseudogene 4_954.1 pseudo : _no_value

name	Map1lc3 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384038
definition	note : similar to microtubule-associated protein 1 light chain 3 beta pseudo : _no_value

name	LOC384039 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384039
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 15 Proteins pseudo : _no_value

name	Usp24 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329908 MGI:1919936
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 166 ESTs, 2 Proteins

name	LOC100039616 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039616
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 100 ESTs, 1 Protein

name	Pcsk9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100102 MGI:2140260
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bsnd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140475 MGI:2153465
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem61 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329909 MGI:3041156
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein

name	Dhcr24 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74754 MGI:1922004
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC055111 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242602 MGI:2681853
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttc22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230576 MGI:3045307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pars2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230577 MGI:2386296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ttc4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72354 MGI:1919604
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm1027 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381538 MGI:2685873
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 1 Protein

name	BC026682 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230579 MGI:2657115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acot11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329910 MGI:1913736
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ssbp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72475 MGI:1919725
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Mrpl37 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56280 MGI:1926268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2810410C14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230582 MGI:1919657
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdcp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242603 MGI:3045328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2210012G02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66526 MGI:1913776
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem59 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56374 MGI:1929278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC546840 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546840
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prkaa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54792085 GeneID:108079 MGI:1336173
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase, AMP-activated, alpha 2 catalytic subunit transcript_id : NM_178143.1

name	LOC100039513 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252809 GeneID:100039513
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100039513 transcript_id : XM_001473391.1

name	Ppap2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86262159 GeneID:67916 MGI:1915166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidic acid phosphatase type 2B transcript_id : NM_080555.2

name	Usp24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252835 GeneID:329908 MGI:1919936
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 166 ESTs, 2 Proteins product : ubiquitin specific peptidase 24 transcript_id : XM_001481281.1

name	LOC100039616 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252812 GeneID:100039616
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 100 ESTs, 1 Protein product : similar to Usp24 protein transcript_id : XM_001473472.1

name	Pcsk9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956351 GeneID:100102 MGI:2140260
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proprotein convertase subtilisin/kexin type 9 transcript_id : NM_153565.1

name	Bsnd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91598893 GeneID:140475 MGI:2153465
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Bartter syndrome, infantile, with sensorineural deafness (Barttin) transcript_id : NM_080458.2

name	Tmem61 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252837 GeneID:329909 MGI:3041156
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein product : transmembrane protein 61 transcript_id : XM_001474114.1

name	Dhcr24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114155128 GeneID:74754 MGI:1922004
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 24-dehydrocholesterol reductase transcript_id : NM_053272.2

name	BC055111 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801289 GeneID:242602 MGI:2681853
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC055111 transcript_id : NM_183182.2

name	Ttc22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377354 GeneID:230576 MGI:3045307
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 22 transcript_id : NM_177667.3

name	Pars2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:139948346 GeneID:230577 MGI:2386296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prolyl-tRNA synthetase (mitochondrial)(putative) transcript_id : NM_172272.2

name	Pars2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:139948913 GeneID:230577 MGI:2386296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prolyl-tRNA synthetase (mitochondrial)(putative) transcript_id : NM_001083887.1

name	Ttc4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30794387 GeneID:72354 MGI:1919604
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 4 transcript_id : NM_028209.1

name	Gm1027 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94372168 GeneID:381538 MGI:2685873
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 1 Protein product : gene model 1027, (NCBI) transcript_id : XM_978122.1

name	BC026682 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22165387 GeneID:230579 MGI:2657115
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC026682 transcript_id : NM_146149.1

name	Acot11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543862 GeneID:329910 MGI:1913736
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-CoA thioesterase 11 transcript_id : NM_025590.3

name	Ssbp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38372896 GeneID:72475 MGI:1919725
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : single-stranded DNA binding protein 3 transcript_id : NM_023672.2

name	Ssbp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38372898 GeneID:72475 MGI:1919725
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : single-stranded DNA binding protein 3 transcript_id : NM_198438.1

name	Mrpl37 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22128624 GeneID:56280 MGI:1926268
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein L37 transcript_id : NM_025500.1

name	2810410C14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341983 GeneID:230582 MGI:1919657
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810410C14 gene transcript_id : NM_175471.2

name	Cdcp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802087 GeneID:242603 MGI:3045328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CUB domain containing protein 2 transcript_id : NM_172873.3

name	2210012G02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126723248 GeneID:66526 MGI:1913776
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2210012G02 gene transcript_id : NM_025617.2

name	Tmem59 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981330 GeneID:56374 MGI:1929278
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 59 transcript_id : NM_029565.2

name	LOC546840 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:124486898 GeneID:546840
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : similar to low density lipoprotein receptor A domain containing 1 transcript_id : NM_001081272.1

name	Prkaa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54792086 CCDS:CCDS18416.1 GeneID:108079 MGI:1336173
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0004679 - AMP-activated protein kinase activity [Evidence TAS]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0006950 - response to stress [Evidence TAS] codon_start : 1 exception : mismatches in translation product : AMP-activated protein kinase alpha 2 catalytic subunit protein_id : NP_835279.1

name	LOC100039513 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252810 GeneID:100039513
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473441.1

name	Ppap2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18017590 CCDS:CCDS18417.1 GeneID:67916 MGI:1915166
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0042577 - lipid phosphatase activity [Evidence IMP]; GO:0008195 - phosphatidate phosphatase activity [Evidence IEA] GO_process : GO:0001568 - blood vessel development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0010003 - gastrulation (sensu Mammalia) [Evidence IMP]; GO:0006644 - phospholipid metabolism [Evidence IMP]; GO:0030111 - regulation of Wnt receptor signaling pathway [Evidence IDA] codon_start : 1 product : phosphatidic acid phosphatase type 2B protein_id : NP_542122.1

name	Usp24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149252836 GeneID:329908 MGI:1919936
definition	codon_start : 1 exception : unclassified translation discrepancy note : overriding stop codons product : similar to ubiquitin specific protease 24 protein_id : XP_001481331.1 transl_except : (pos:106036879..106036881,aa:OTHER) transl_except : (pos:106036897..106036899,aa:OTHER) transl_except : (pos:106036948..106036950,aa:OTHER) transl_except : (pos:106040711..106040713,aa:OTHER) transl_except : (pos:106041344..106041346,aa:OTHER) transl_except : (pos:106041362..106041364,aa:OTHER) transl_except : (pos:106041374..106041376,aa:OTHER) transl_except : (pos:106041434..106041436,aa:OTHER) transl_except : (pos:106041443..106041445,aa:OTHER) transl_except : (pos:106042678..106042680,aa:OTHER) transl_except : (pos:106042690..106042692,aa:OTHER) transl_except : (pos:106042771..106042773,aa:OTHER) transl_except : (pos:106042795..106042797,aa:OTHER) transl_except : (pos:106043668..106043670,aa:OTHER) transl_except : (pos:106043695..106043697,aa:OTHER) transl_except : (pos:106045326..106045328,aa:OTHER) transl_except : (pos:106045347..106045349,aa:OTHER) transl_except : (pos:106046268..106046270,aa:OTHER) transl_except : (pos:106046286..106046288,aa:OTHER) transl_except : (pos:106046358..106046360,aa:OTHER) transl_except : (pos:106046364..106046366,aa:OTHER) transl_except : (pos:106046385..106046387,aa:OTHER) transl_except : (pos:106046397..106046399,aa:OTHER) transl_except : (pos:106046645..106046647,aa:OTHER) transl_except : (pos:106048283..106048285,aa:OTHER) transl_except : (pos:106048295..106048297,aa:OTHER) transl_except : (pos:106048340..106048342,aa:OTHER) transl_except : (pos:106049948..106049950,aa:OTHER) transl_except : (pos:106049951..106049953,aa:OTHER) transl_except : (pos:106049987..106049989,aa:OTHER) transl_except : (pos:106049996..106049998,aa:OTHER) transl_except : (pos:106050175..106050177,aa:OTHER) transl_except : (pos:106050220..106050222,aa:OTHER) transl_except : (pos:106051663..106051665,aa:OTHER) transl_except : (pos:106051684..106051686,aa:OTHER) transl_except : (pos:106051835..106051837,aa:OTHER) transl_except : (pos:106051841..106051843,aa:OTHER) transl_except : (pos:106051901..106051903,aa:OTHER) transl_except : (pos:106052696..106052698,aa:OTHER) transl_except : (pos:106053035..106053037,aa:OTHER) transl_except : (pos:106053065..106053067,aa:OTHER) transl_except : (pos:106053116..106053118,aa:OTHER) transl_except : (pos:106058032..106058034,aa:OTHER) transl_except : (pos:106058122..106058124,aa:OTHER) transl_except : (pos:106060092..106060094,aa:OTHER) transl_except : (pos:106060330..106060332,aa:OTHER) transl_except : (pos:106060357..106060359,aa:OTHER) transl_except : (pos:106061137..106061139,aa:OTHER) transl_except : (pos:106061149..106061151,aa:OTHER) transl_except : (pos:106062891..106062893,aa:OTHER) transl_except : (pos:106069865..106069867,aa:OTHER) transl_except : (pos:106069916..106069918,aa:OTHER) transl_except : (pos:106071702..106071704,aa:OTHER) transl_except : (pos:106071711..106071713,aa:OTHER) transl_except : (pos:106073594..106073596,aa:OTHER) transl_except : (pos:106074654..106074656,aa:OTHER) transl_except : (pos:106074669..106074671,aa:OTHER) transl_except : (pos:106074705..106074707,aa:OTHER) transl_except : (pos:106076540..106076542,aa:OTHER) transl_except : (pos:106076573..106076575,aa:OTHER) transl_except : (pos:106076579..106076581,aa:OTHER) transl_except : (pos:106079042..106079044,aa:OTHER) transl_except : (pos:106079069..106079071,aa:OTHER) transl_except : (pos:106079697..106079699,aa:OTHER) transl_except : (pos:106080573..106080575,aa:OTHER) transl_except : (pos:106081924..106081926,aa:OTHER) transl_except : (pos:106081987..106081989,aa:OTHER) transl_except : (pos:106082220..106082222,aa:OTHER) transl_except : (pos:106082226..106082228,aa:OTHER) transl_except : (pos:106082265..106082267,aa:OTHER) transl_except : (pos:106082274..106082276,aa:OTHER) transl_except : (pos:106082277..106082279,aa:OTHER) transl_except : (pos:106082750..106082752,aa:OTHER) transl_except : (pos:106083448..106083450,aa:OTHER) transl_except : (pos:106084010..106084012,aa:OTHER) transl_except : (pos:106084019..106084021,aa:OTHER) transl_except : (pos:106084777..106084779,aa:OTHER) transl_except : (pos:106086212..106086214,aa:OTHER) transl_except : (pos:106086263..106086265,aa:OTHER) transl_except : (pos:106086272..106086274,aa:OTHER) transl_except : (pos:106086987..106086989,aa:OTHER) transl_except : (pos:106087020..106087022,aa:OTHER) transl_except : (pos:106088683..106088685,aa:OTHER) transl_except : (pos:106090820..106090822,aa:OTHER) transl_except : (pos:106090865..106090867,aa:OTHER) transl_except : (pos:106093040..106093042,aa:OTHER) transl_except : (pos:106093616..106093618,aa:OTHER) transl_except : (pos:106097985..106097987,aa:OTHER) transl_except : (pos:106098027..106098029,aa:OTHER) transl_except : (pos:106101100..106101102,aa:OTHER) transl_except : (pos:106101124..106101126,aa:OTHER) transl_except : (pos:106103152..106103154,aa:OTHER) transl_except : (pos:106103194..106103196,aa:OTHER) transl_except : (pos:106104222..106104224,aa:OTHER) transl_except : (pos:106109357..106109359,aa:OTHER) transl_except : (pos:106109378..106109380,aa:OTHER) transl_except : (pos:106111398..106111400,aa:OTHER) transl_except : (pos:106111401..106111403,aa:OTHER) transl_except : (pos:106111413..106111415,aa:OTHER)

name	LOC100039616 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252813 GeneID:100039616
definition	codon_start : 1 product : similar to Usp24 protein protein_id : XP_001473522.1

name	Pcsk9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956352 CCDS:CCDS18418.1 GeneID:100102 MGI:2140260
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]; GO:0004289 - subtilase activity [Evidence IDA] GO_process : GO:0008203 - cholesterol metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0043086 - negative regulation of enzyme activity [Evidence IEA]; GO:0030182 - neuron differentiation [Evidence IDA]; GO:0006508 - proteolysis [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IEA] codon_start : 1 note : convertase subtilisin; neural apoptosis regulated convertase 1 product : proprotein convertase subtilisin/kexin type 9 protein_id : NP_705793.1

name	Bsnd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:91598894 CCDS:CCDS18419.1 GeneID:140475 MGI:2153465
definition	GO_component : GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence ISS]; GO:0005887 - integral to plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0043234 - protein complex [Evidence IDA] GO_function : GO:0005254 - chloride channel activity [Evidence IDA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006873 - cell ion homeostasis [Evidence ISS]; GO:0030644 - chloride ion homeostasis [Evidence NAS]; GO:0030007 - potassium ion homeostasis [Evidence NAS]; GO:0007605 - sensory perception of sound [Evidence NAS] codon_start : 1 note : barttin product : Bartter syndrome, infantile, with sensorineural deafness (Barttin) protein_id : NP_536706.2

name	Tmem61 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149252838 GeneID:329909 MGI:3041156
definition	codon_start : 1 product : similar to Transmembrane protein 61 protein_id : XP_001474164.1

name	Dhcr24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114155129 CCDS:CCDS18420.1 GeneID:74754 MGI:1922004
definition	GO_function : GO:0016628 - oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor [Evidence ISS] GO_process : GO:0042987 - amyloid precursor protein catabolism [Evidence IMP]; GO:0006695 - cholesterol biosynthesis [Evidence ISS] [Evidence IMP]; GO:0008203 - cholesterol metabolism [Evidence IMP]; GO:0006118 - electron transport [Evidence IEA]; GO:0030539 - male genitalia development [Evidence IMP]; GO:0016044 - membrane organization and biogenesis [Evidence IMP]; GO:0031639 - plasminogen activation [Evidence IMP]; GO:0008104 - protein localization [Evidence IMP]; GO:0043588 - skin development [Evidence ISS]; GO:0016125 - sterol metabolism [Evidence IMP]; GO:0009888 - tissue development [Evidence IMP] codon_start : 1 note : seladin-1; 3-beta-hydroxysterol delta-24 reductase product : 24-dehydrocholesterol reductase precursor protein_id : NP_444502.2

name	BC055111 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34147230 GeneID:242602 MGI:2681853
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC242602 protein_id : NP_899005.1

name	Ttc22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244092 CCDS:CCDS18422.1 GeneID:230576 MGI:3045307
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : tetratricopeptide repeat domain 22 protein_id : NP_808335.1

name	Pars2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:139948914 GeneID:230577 MGI:2386296
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA] GO_process : GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]; GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; class II tRNA synthetase product : prolyl-tRNA synthetase (mitochondrial)(putative) isoform 2 protein_id : NP_001077356.1

name	Pars2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:139948347 CCDS:CCDS18423.1 GeneID:230577 MGI:2386296
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA] GO_process : GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]; GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; class II tRNA synthetase product : prolyl-tRNA synthetase (mitochondrial)(putative) isoform 1 protein_id : NP_758476.2

name	Ttc4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794388 CCDS:CCDS18424.1 GeneID:72354 MGI:1919604
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : tetratricopeptide repeat domain 4 protein_id : NP_082485.1

name	Gm1027 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94372169 GeneID:381538 MGI:2685873
definition	codon_start : 1 product : hypothetical protein protein_id : XP_983216.1

name	BC026682 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22165388 CCDS:CCDS18425.1 GeneID:230579 MGI:2657115
definition	codon_start : 1 product : hypothetical protein LOC230579 protein_id : NP_666261.1

name	Acot11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22165404 CCDS:CCDS18426.1 GeneID:329910 MGI:1913736
definition	GO_component : GO:0005737 - cytoplasm [Evidence IC] GO_function : GO:0016291 - acyl-CoA thioesterase activity [Evidence TAS]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004759 - serine esterase activity [Evidence IEA] GO_process : GO:0006631 - fatty acid metabolism [Evidence NAS]; GO:0007242 - intracellular signaling cascade [Evidence NAS]; GO:0009266 - response to temperature stimulus [Evidence IEP] codon_start : 1 product : thioesterase, adipose associated protein_id : NP_079866.2

name	Ssbp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38372897 CCDS:CCDS18427.1 GeneID:72475 MGI:1919725
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence ISS] [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; Lck-associated signal transducer product : single-stranded DNA-binding protein isoform a protein_id : NP_076161.2

name	Ssbp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38372899 CCDS:CCDS18428.1 GeneID:72475 MGI:1919725
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence ISS] [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; Lck-associated signal transducer product : single-stranded DNA-binding protein isoform b protein_id : NP_940840.1

name	Mrpl37 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22128625 CCDS:CCDS18429.1 GeneID:56280 MGI:1926268
definition	GO_component : GO:0005761 - mitochondrial ribosome [Evidence ISS]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] codon_start : 1 note : ribosomal protein, mitochondrial, L2 product : mitochondrial ribosomal protein L37 protein_id : NP_079776.1

name	2810410C14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425208 GeneID:230582 MGI:1919657
definition	GO_function : GO:0004128 - cytochrome-b5 reductase activity [Evidence IEA]; GO:0050660 - FAD binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC230582 protein_id : NP_780680.1

name	Cdcp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370326 CCDS:CCDS18430.1 GeneID:242603 MGI:3045328
definition	codon_start : 1 product : CUB domain containing protein 2 protein_id : NP_766461.1

name	2210012G02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385072 CCDS:CCDS18431.1 GeneID:66526 MGI:1913776
definition	GO_function : GO:0003746 - translation elongation factor activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC66526 protein_id : NP_079893.1

name	Tmem59 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981331 CCDS:CCDS18432.1 GeneID:56374 MGI:1929278
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : thymic dendritic cell-derived factor 1 protein_id : NP_083841.3

name	LOC546840 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:124486899 GeneID:546840
definition	codon_start : 1 product : similar to low density lipoprotein receptor A domain containing 1 protein_id : NP_001074741.1

name	LOC665518 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665518
definition	number : 1 pseudo : _no_value

name	LOC433742 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252831 GeneID:433742
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 39 ESTs, 13 Proteins product : similar to ubiquitin-conjugating enzyme UbcH6 pseudo : _no_value transcript_id : XR_031474.1

name	LOC434381 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252811 GeneID:434381
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 mRNAs, 651 ESTs product : hypothetical LOC434381 pseudo : _no_value transcript_id : XR_031223.1

name	LOC384039 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252834 GeneID:384039
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 15 Proteins product : similar to Heat shock protein 1 (chaperonin) pseudo : _no_value transcript_id : XR_031555.1

clone name	MSMg01-069C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105A04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-112B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132H12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-089N22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-159K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121I07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-081O15.b	B6Ng01-081O15.g
ACC	DH896624	DH896625
length	1,128	1,065
definition	DH896624\|Mus musculus domesticus DNA, BAC clone: B6Ng01-081O15, 5' end.	DH896625\|Mus musculus domesticus DNA, BAC clone: B6Ng01-081O15, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(105,885,769 - 105,886,903)	(105,710,261 - 105,711,312)
sequence	gaattccagtttaggcaagacccaggttcatcccacgttccacatgagtc tccaaaggggacctgagtttccagggcctttctgactccttccaaagagc gtttgtgtttcttctctttgcatcagctggagcagttcccagcaaaggga cctggaaggctcttcctgcagatgctcaggtcctgtgttaatctcttttt gatggcctttatctgcaggtggactccctgatgtactcagtgccggaggg aggagctaatcctttgctgtgggaccttggggaccaatcactcacttcta gaagtctctcctttggggccggaagcctggcagtgagggagaaaggcctg agccgagtggggaggtaaggatggctaggatgcctgggctgggttagatg gttgagtctatttaatattttgaaatcccattctgccagttgatgtcaca tggctggcacatgggaaatctacctgacagtcctcccttccaccattttc tcactttgttacaaggtaaatcagggtccctctaggggtccttagtctca ttaataaaagcatttaagaatggactcagaagaaagctcaagggcaatta ctttagagtttaaaagaaaaccccaaagcaggcaggctgtaaatctcagc agctccctagaggaggaagatagagttaagaaagagagaaagccatgcca tttgaattagaaatacaggtcagccaagtggcaaagtcacagagtgggga agagagctttaaagagagaatgaaaaagccaagagtaccagaaaaaagca tgcgctccaaccagcatctaaaaggaagatggaagagagaaaaagaagag ctaagcttctctaagttgaagctcacagaggcaaaaaaaacaaaaaaaaa caaaaactatcacggctttatagcatccctgtagatactgtgcacatgac aagaatccaggaagtacgttatctcattacaggatattattccttacccc cttttagtatggcttaaggtgacccatttctgagggtgtgtcctgccttc ccgaaaggattctcctttagccaggtggattatcatgcctacctgggcat gttaggctttccccaggccagagactcc	gaattcatctttgaacaccggagcctttgtggggacacagacttcatatc taaactactaagatcatgctgttccttgtgtaccagaagtgtctgtagca aagactgaattatttctgatacagccactcattgggaactagttcatccc catggccagtgttatggccaatgcagaaacacagctgagaatcctgaggc cagtcctcacttcttactgtcactcatatactttcctggtcacctatgta gtatctacatcctgggaaggagggtccagcaccaaaggaagccaagaaat gagacgtgaggatatgttgggggctgctgagaatcttctggggttctttg ataacactgaaagcactgagctaaaagccctggaacctgcctcagtgaca agttgtgataactactttgatacagctctttcatcatttaagcggtttga gttctaaacttgtattatttacagataaaaatatcctaactcccaaactc tcccaaacctgaacttgaacgggctggaacttttgctcctagctctttgc tagaaaatacagagatctggtgcttagatttgtttcgatctttatgcaaa ggagaactggctgcagatgtgagtgtttggctccaccttacagactgaaa attcacgtggttgatcctaagacctgtggatgaaatgctctaagttctac gcagcaacctcctattcagaaactctcatcaaaacctagcagaggaaagc attctgcttgtgggtcggatgccagttgcactgaactacttaaacgctgg tggactctgaaagtatgtactcttttctacagattctctatgcagatggt tcttgccataagaaaagaaaatatttgcattgtgcatttttaataggctc attggaaagcccctgcacacccctaccgcagaatttactgctctttaaag aggactatttgctcaaattggaatgcaaaacaacctcccccccttgttcc catggttcttcagaaggacagatattctgacaccaaaatgaaaaataaat gaagctcctctgccc
quality values	Open. Hide. 8 13 8 23 43 35 32 8 31 43 55 50 38 41 61 43 37 55 55 61 49 55 55 40 52 11 13 11 24 15 19 12 12 8 8 12 30 30 52 59 59 40 61 59 61 61 61 59 61 59 59 59 59 59 61 61 61 61 61 61 59 59 61 61 61 59 61 61 61 55 44 49 30 28 28 35 31 49 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 59 59 59 59 59 59 59 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 59 59 61 59 59 59 61 61 61 61 59 49 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 59 61 61 59 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 52 59 59 49 59 59 61 59 61 61 61 61 61 61 59 61 61 59 61 61 61 61 59 59 61 61 59 59 59 59 59 59 59 59 59 61 61 61 59 61 61 61 61 59 59 59 52 59 59 59 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 59 59 61 59 61 61 59 61 61 61 61 61 61 61 59 59 59 59 59 52 61 61 61 59 59 61 61 61 59 59 61 59 61 61 61 61 59 59 59 61 55 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 49 55 61 61 61 61 61 61 61 61 55 61 49 52 55 52 41 52 61 61 55 61 61 55 55 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 55 61 61 61 61 61 61 61 55 61 61 61 55 61 61 61 61 61 39 61 61 61 55 61 61 61 61 55 43 43 61 61 61 61 61 61 47 39 43 35 29 50 50 61 52 61 50 39 43 43 35 43 61 53 61 50 53 50 50 50 53 53 61 39 52 45 50 50 52 52 50 42 53 42 61 43 40 61 50 53 52 52 43 14 28 53 52 36 53 50 53 39 47 61 61 22 52 61 61 34 33 61 28 52 42 39 61 40 61 42 38 37 61 47 53 53 53 31 61 61 61 50 53 33 38 47 45 50 50 47 39 30 45 42 38 42 20 53 50 45 43 57 38 53 53 43 34 42 45 50 57 53 50 32 21 45 34 31 50 53 45 47 38 43 28 22 39 22 53 53 20 52 53 50 32 45 50 40 30 46 26 30 24 21 25 17 37 47 53 40 57 26 57 50 57 57 42 38 42 53 22 47 53 38 52 29 24 53 25 27 33 37 45 53 33 13 37 57 57 52 36 53 38 23 57 21 38 53 12 8 47 28 28 27 50 33 43 29 13 50 53 30 34 41 25 53 40 38 37 31 27 41 53 57 35 37 52 32 53 32 50 38 36 33 42 29 24 10 23 28 37 22 26 22 30 33 24 39 21 32 27 30 33 17 34 40 36 36 9 27 10 7 8 27 35 24 30 32 36 38 34 38 38 24 40 36 36 33 38 20 37 52 41 38 33 17 14 22 17 33 48 25 42 41 39 31 53 53 53 33 33 53 21 20 37 22 26 25 22 30 19 37 12 38 25 33 44 40 44 28 32 45 28 14 8 7 11 36 32 33 27 37 41 37 40 37 41 37 10 41 21 40 32 16 23 28 12 32 37 20 10 17 15 27 41 19 30 32 33 45 37 39 46 44 45 25 30 29 44 36 30 36 47 47 45 30 29 31 17 18 16 24 32 28 16 26 35 25 29 25 30 14 13 51 46 21 37 19 20 27 21 30 30 47 30 23 29 28 29 10 17 9 5 16 25 28 16 30 20 9 16 5 20 22 34 24 28 26 22 21 14 27 14 17 7 8 21 20 32 28 22 19 21 13 28 31 13 14 28 30 31 13 29 33 22 20 8 11 15 7 7 39 28 17 15 17 31 29 28 23 16 25 20 31 38 51 21 21 51 41 19 14 16 9 5 6 10 31 21 23 9 8 10 33 11 11 28 26 22 41 10 7 19 17 9 31 14 8 17 9 29 32 5 5 7 11 5 8 10 8 7 10 23 10 20 15 9 16 6 9 36 28 14 16 19 19 11 8 10 26 38 9 32 25 9 9 17 21 9 14 8 16 5 8 17 6 4 5 10 25 8 9 18 9 34 12 20 13 19 9 12 9 4 5 5 6 7 10 6 5 13 13 8 14 32 23 31 18 15 10 4 4 5 16 16 5 5 9 6 9 4 8 29 17	Open. Hide. 55 61 37 49 12 13 19 11 26 12 25 26 12 16 12 12 25 45 45 59 59 59 61 61 61 59 59 59 61 59 61 61 61 61 61 59 61 61 59 59 59 61 61 61 61 59 61 61 44 36 36 27 28 26 28 44 39 36 59 59 59 59 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 52 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 59 59 59 55 37 59 59 61 59 59 59 59 59 59 59 49 59 59 59 52 55 59 59 59 59 52 59 61 59 52 59 59 61 59 61 59 59 59 59 59 59 59 59 59 59 59 61 59 59 41 61 59 61 61 59 61 59 59 61 61 61 59 52 61 61 61 61 59 59 59 55 59 61 61 61 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 59 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 52 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 59 59 61 59 59 59 59 59 59 52 59 59 59 61 61 61 59 61 59 45 52 41 59 52 61 59 61 59 49 59 59 43 52 59 59 59 61 61 61 59 61 61 61 59 61 61 61 59 61 59 59 61 59 59 59 61 49 61 59 61 59 59 59 59 61 61 61 61 61 59 59 61 61 61 61 61 59 61 59 61 61 59 61 61 59 59 59 52 49 59 59 61 61 61 59 59 59 59 52 52 49 52 43 61 61 61 61 61 55 61 61 61 61 55 55 55 61 55 61 55 55 55 61 61 61 52 61 61 61 61 55 52 55 55 55 52 55 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 55 61 61 55 61 55 55 61 61 61 55 61 61 61 61 61 52 61 61 61 61 61 61 61 61 55 55 55 55 61 61 25 26 10 13 24 21 61 61 61 61 61 61 55 49 55 55 41 55 50 55 50 50 49 50 49 41 49 43 37 30 38 43 55 35 50 47 55 61 61 61 61 55 55 55 49 50 50 55 55 50 55 55 55 55 61 61 61 61 50 55 55 61 55 50 53 61 61 61 45 50 41 61 61 61 61 61 61 53 61 52 53 50 61 53 61 52 61 61 61 61 38 50 45 53 61 61 61 50 53 53 50 50 61 50 47 37 61 61 43 39 50 61 53 52 61 61 25 31 8 17 21 27 11 13 27 61 50 53 50 53 32 61 14 39 39 52 50 40 45 50 43 50 53 35 61 53 50 52 61 61 45 61 42 50 39 28 43 35 43 35 27 45 34 50 42 24 47 7 16 47 40 40 53 61 33 52 27 31 35 23 34 28 28 50 39 45 61 45 47 53 53 38 42 50 38 61 52 39 47 53 35 50 47 45 33 27 27 13 19 30 18 52 34 36 30 53 34 39 37 43 14 36 28 53 29 36 50 30 52 38 30 37 27 24 34 45 45 42 32 39 38 50 34 28 36 14 12 29 33 53 27 40 40 40 30 31 36 34 9 35 32 29 28 23 30 35 20 17 16 10 8 12 57 31 47 29 42 45 22 38 45 25 43 17 52 37 50 45 42 38 24 53 24 36 26 40 29 32 36 36 24 21 53 20 33 50 27 29 27 9 17 19 21 22 6 26 6 17 35 33 37 33 31 20 20 19 31 33 35 14 11 38 35 32 53 27 32 42 50 36 28 52 46 38 21 53 52 30 26 9 52 23 33 28 33 14 22 22 38 50 44 50 40 53 35 33 52 37 20 33 16 37 21 11 8 19 31 30 27 37 38 34 20 17 8 31 23 23 32 8 35 21 14 19 42 10 14 8 18 11 29 10 35 32 53 38 23 52 40 39 53 21 13 16 53 14 28 20 10 8 17 25 22 33 20 13 26 57 57 57 36 29 17 16 17 19 37 28 37 33 14 57 18 37 14 30 27 28 18 28 34 15 27 6 10 24 17 14 10 23 23 10 7 7 10 20 40 29 21 6 7 27 12 28 39 25 18 12 12 26 18 24 19 9 30 21 9 12 18 9 27 11 20 17 16 14 22 11 18 12 13 6 21 13 14 14 11 12 8 17 28 13 14 13 7 7 10 10 21 10 8 6 5 7 23 19 32 46 48 51 31 24 21 11 7 17 5 23 27 33 40 13 28 21 11 19 5 7 7 15 9 10 7 15 19 17 14 13 15 21 6 9 9 13 10 7 7 5 13 21 15 10 11 14 8 19 15 12 11 20 33 28 30 24 29 7 36 27 9 7 20 9 7 9 14 17 28 18 10 5 7 7 8 5 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_105885769_105886903
seq2: B6Ng01-081O15.b_45_1172 (reverse)

seq1  GGAGTCTCTGGCCTAGGTGAAGACCTAACA-GTCCAGTTGGGCA-GATAA  48
      |||||||||||||| || |||  ||||||| | |||| | |||| |||||
seq2  GGAGTCTCTGGCCT-GGGGAAAGCCTAACATGCCCAGGTAGGCATGATAA  49

seq1  ATCAACTGGCTAAAGGAGAATCCTTTCGGGAAGGCAGGACCACCCCTCAG  98
        || |||||||||||||||||||||||||||||||||||   |||||||
seq2  TCCACCTGGCTAAAGGAGAATCCTTTCGGGAAGGCAGGACACACCCTCAG  99

seq1  GAATTGGGTTCACCTTAAGCCATACTAAAAAGGGGGTAAGGAATAATTAT  148
       |||  || ||||||||||||||||| ||||||||||||||||||| |||
seq2  AAAT--GGGTCACCTTAAGCCATACT-AAAAGGGGGTAAGGAATAA-TAT  145

seq1  CCCTGTAATGAGATAACGTACTTCCCTGAATTCTTGTCATGTGCACAGTA  198
       |||||||||||||||||||||| |||| |||||||||||||||||||||
seq2  -CCTGTAATGAGATAACGTACTT-CCTGGATTCTTGTCATGTGCACAGTA  193

seq1  TCTACAGGGATGCTATAAAGCCGTGATAGTTTTTTGTTTTTTTTTGTTTT  248
      ||||||||||||||||||||||||||||| |||||||||||||||| |||
seq2  TCTACAGGGATGCTATAAAGCCGTGATAG-TTTTTGTTTTTTTTTG-TTT  241

seq1  TTTTTGCCTCTGTGAGCTTCAACTTAGAGAAGCTTAGCCTCTTCTTTTTC  298
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTTTGCCTCTGTGAGCTTCAACTTAGAGAAGCTTAG-CTCTTCTTTTTC  290

seq1  TCTCTTCCATCTTCCTTTTAGATGCTGGTTGGAGCGCATGC-TTTTTCTG  347
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCTCTTCCATCTTCCTTTTAGATGCTGGTTGGAGCGCATGCTTTTTTCTG  340

seq1  GTACTCTTGGCTTTTTCATTCTCTCTTTAAAGCTCTCTTCCCCACTCTGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCTTGGCTTTTTCATTCTCTCTTTAAAGCTCTCTTCCCCACTCTGT  390

seq1  GACTTTGCCACTTGGCTGACCTGTATTTCTAATTCAAATGGCATGGCTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTGCCACTTGGCTGACCTGTATTTCTAATTCAAATGGCATGGCTTT  440

seq1  CTCTCTTTCTTAACTCTATCTTCCTCCTCTAGGGAGCTGCTGAGATTTAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTCTTAACTCTATCTTCCTCCTCTAGGGAGCTGCTGAGATTTAC  490

seq1  AGCCTGCCTGCTTTGGGGTTTTCTTTTAAACTCTAAAGTAATTGCCCTTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCCTGCTTTGGGGTTTTCTTTTAAACTCTAAAGTAATTGCCCTTG  540

seq1  AGCTTTCTTCTGAGTCCATTCTTAAATGCTTTTATTAATGAGACTAAGGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCTTCTGAGTCCATTCTTAAATGCTTTTATTAATGAGACTAAGGA  590

seq1  CCCCTAGAGGGACCCTGATTTACCTTGTAACAAAGTGAGAAAATGGTGGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAGAGGGACCCTGATTTACCTTGTAACAAAGTGAGAAAATGGTGGA  640

seq1  AGGGAGGACTGTCAGGTAGATTTCCCATGTGCCAGCCATGTGACATCAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGACTGTCAGGTAGATTTCCCATGTGCCAGCCATGTGACATCAAC  690

seq1  TGGCAGAATGGGATTTCAAAATATTAAATAGACTCAACCATCTAACCCAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGAATGGGATTTCAAAATATTAAATAGACTCAACCATCTAACCCAG  740

seq1  CCCAGGCATCCTAGCCATCCTTACCTCCCCACTCGGCTCAGGCCTTTCTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCATCCTAGCCATCCTTACCTCCCCACTCGGCTCAGGCCTTTCTC  790

seq1  CCTCACTGCCAGGCTTCCGGCCCCAAAGGAGAGACTTCTAGAAGTGAGTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTGCCAGGCTTCCGGCCCCAAAGGAGAGACTTCTAGAAGTGAGTG  840

seq1  ATTGGTCCCCAAGGTCCCACAGCAAAGGATTAGCTCCTCCCTCCGGCACT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTCCCCAAGGTCCCACAGCAAAGGATTAGCTCCTCCCTCCGGCACT  890

seq1  GAGTACATCAGGGAGTCCACCTGCAGATAAAGGCCATCAAAAAGAGATTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACATCAGGGAGTCCACCTGCAGATAAAGGCCATCAAAAAGAGATTA  940

seq1  ACACAGGACCTGAGCATCTGCAGGAAGAGCCTTCCAGGTCCCTTTGCTGG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGACCTGAGCATCTGCAGGAAGAGCCTTCCAGGTCCCTTTGCTGG  990

seq1  GAACTGCTCCAGCTGATGCAAAGAGAAGAAACACAAACGCTCTTTGGAAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCTCCAGCTGATGCAAAGAGAAGAAACACAAACGCTCTTTGGAAG  1040

seq1  GAGTCAGAAAGGCCCTGGAAACTCAGGTCCCCTTTGGAGACTCATGTGGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGAAAGGCCCTGGAAACTCAGGTCCCCTTTGGAGACTCATGTGGA  1090

seq1  ACGTGGGATGAACCTGGGTCTTGCCTAAACTGGAATTC  1135
      ||||||||||||||||||||||||||||||||||||||
seq2  ACGTGGGATGAACCTGGGTCTTGCCTAAACTGGAATTC  1128

seq1: chr4_105710261_105711312
seq2: B6Ng01-081O15.g_72_1135

seq1  GAATTCATCTTTGAACACCGGAGCCTTTGTGGGGACACAGACTTCATATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTTTGAACACCGGAGCCTTTGTGGGGACACAGACTTCATATC  50

seq1  TAAACTACTAAGATCATGCTGTTCCTTGTGTACCAGAAGTGTCTGTAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTACTAAGATCATGCTGTTCCTTGTGTACCAGAAGTGTCTGTAGCA  100

seq1  AAGACTGAATTATTTCTGATACAGCCACTCATTGGGAACTAGTTCATCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGAATTATTTCTGATACAGCCACTCATTGGGAACTAGTTCATCCC  150

seq1  CATGGCCAGTGTTATGGCCAATGCAGAAACACAGCTGAGAATCCTGAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCCAGTGTTATGGCCAATGCAGAAACACAGCTGAGAATCCTGAGGC  200

seq1  CAGTCCTCACTTCTTACTGTCACTCATATACTTTCCTGGTCACCTATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTCACTTCTTACTGTCACTCATATACTTTCCTGGTCACCTATGTA  250

seq1  GTATCTACATCCTGGGAAGGAGGGTCCAGCACCAAAGGAAGCCAAGAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTACATCCTGGGAAGGAGGGTCCAGCACCAAAGGAAGCCAAGAAAT  300

seq1  GAGACGTGAGGATATGTTGGGGGCTGCTGAGAATCTTCTGGGGTTCTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACGTGAGGATATGTTGGGGGCTGCTGAGAATCTTCTGGGGTTCTTTG  350

seq1  ATAACACTGAAAGCACTGAGCTAAAAGCCCTGGAACCTGCCTCAGTGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACTGAAAGCACTGAGCTAAAAGCCCTGGAACCTGCCTCAGTGACA  400

seq1  AGTTGTGATAACTACTTTGATACAGCTCTTTCATCATTTAAGCGGTTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGATAACTACTTTGATACAGCTCTTTCATCATTTAAGCGGTTTGA  450

seq1  GTTCTAAACTTGTATTATTTACAGATAAAAATATCCTAACTCCCAAACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAAACTTGTATTATTTACAGATAAAAATATCCTAACTCCCAAACTC  500

seq1  TCCCAAACCTGAACTTGAACGGGCTGGAACTTTTGCTCCTAGCTCTTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAACCTGAACTTGAACGGGCTGGAACTTTTGCTCCTAGCTCTTTGC  550

seq1  TAGAAAATACAGAGATCTGGTGCTTAGA-TTGTTTCGATC-TTATGCAAA  598
      |||||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  TAGAAAATACAGAGATCTGGTGCTTAGATTTGTTTCGATCTTTATGCAAA  600

seq1  GGAGAACTGGCTGCAGATGTGAGTG-TTGGCTCCACCTTACAGACTGAAA  647
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGAGAACTGGCTGCAGATGTGAGTGTTTGGCTCCACCTTACAGACTGAAA  650

seq1  ATTCACGTGGTTGATCCTAAGACCTGTGGATGAAATGCTCTAAGTTCTAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACGTGGTTGATCCTAAGACCTGTGGATGAAATGCTCTAAGTTCTAC  700

seq1  GCAGCAACCTCCTATTCAGAAACTCTCATCAAAACCTAGCAGAGGAAAGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAACCTCCTATTCAGAAACTCTCATCAAAACCTAGCAGAGGAAAGC  750

seq1  ATTCTGCTTGT-GGTCGGATGCCAG-TGCACTGAACTAC-TAAACGCTGG  794
      ||||||||||| ||||||||||||| ||||||||||||| ||||||||||
seq2  ATTCTGCTTGTGGGTCGGATGCCAGTTGCACTGAACTACTTAAACGCTGG  800

seq1  TGGACTCTG-AAGTATGTACTCTTTTCTACAGA-TCTCTATGCAGATGGT  842
      ||||||||| ||||||||||||||||||||||| ||||||||||||||||
seq2  TGGACTCTGAAAGTATGTACTCTTTTCTACAGATTCTCTATGCAGATGGT  850

seq1  TCTTGCCATAAGAAAAGAAAAATATTGCATTGTGCATTTTTAATAGGCTC  892
      |||||||||||||||||||||   ||||||||||||||||||||||||||
seq2  TCTTGCCATAAGAAAAGAAAATATTTGCATTGTGCATTTTTAATAGGCTC  900

seq1  ATTGGAAAGCCACAGCACACCACTACCGCAGAATTTAACTGCTCTTTAAA  942
      ||||||||||| | ||||||| |||||||||||||| |||||||||||||
seq2  ATTGGAAAGCCCCTGCACACCCCTACCGCAGAATTT-ACTGCTCTTTAAA  949

seq1  GAGGACGATTTGCTCAAAT--GGATGCAAAAC-ACCTCCCCCCCATGTCC  989
      |||||| ||||||||||||  | ||||||||| ||||||||||| ||| |
seq2  GAGGACTATTTGCTCAAATTGGAATGCAAAACAACCTCCCCCCCTTGTTC  999

seq1  CCATGTATCTTACAG-AGGACAGATATGCTGACACC-AAATAGAAAATAA  1037
      |||||  |||| ||| ||||||||||| |||||||| ||||  |||||||
seq2  CCATGGTTCTT-CAGAAGGACAGATATTCTGACACCAAAATGAAAAATAA  1048

seq1  AAGCAGCTCCT-TGCC  1052
      | | ||||||| ||||
seq2  ATGAAGCTCCTCTGCC  1064

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Alignment Information