BAC Information

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BAC

Clone NameB6Ng01-082I23
Chromosome4 (Build37)
Map Location 137,135,510 - 137,266,147
singlet/doubletdoublet
Overlap geneUsp48, Rap1gap
Upstream geneAof2, LOC667080, LOC433770, 4930549C01Rik, BC029684, Ephb2, C1qb, C1qc, C1qa, Epha8, Zbtb40, Wnt4, Cdc42, LOC665533, LOC242711, Ela3, 1700013G24Rik, Hspg2, Ldlrad2
Downstream geneAkp2, Ece1, LOC100040558, Eif4g3, Hp1bp3, Kif17, Ddost, Pink1, Cda, LOC625638, LOC625646, 0610009K11Rik, Camk2n1, LOC100040618, 4931403E03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082I23.bB6Ng01-082I23.g
ACCDH897080DH897081
length7431,000
definitionDH897080|Mus musculus domesticus DNA, BAC clone: B6Ng01-082I23, 5' end.DH897081|Mus musculus domesticus DNA, BAC clone: B6Ng01-082I23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,265,405 - 137,266,147)(137,135,510 - 137,136,509)
sequence
gaattcacccatgccacatacaggccagggctgggaggcaggcttcctgg
ctcattaatacctcccggcacccatctgtcccctcctccactctgcatgg
ggttcctgcagaggagcctaccaggactctgatgagctgggtgggtatgt
acatgtggggatggcctgctgggggaccctgggagcccagaagagttcat
agttagagaggaggcaggtgcctaacaactagtccttcaaggctctgcag
aggggacatccacctttagactaggcagtttggttctggggctccctggc
ccatccttacctgcatcttttcaatcatctcaaacagatctgtgttctgc
aacagagacgggagagcaaggtcagacccgagggaagcacggctcactct
gtcgagcccggcacgggctctaaccaccccagcttgcctgatcctctcat
gaggtaccaagagggtgcaaccaagactctgtgggaggggctttgtacaa
ctgaccctccagagtttggccatttgcctactgatgtgagcccagagcct
ggatctctggcagatgccccaactcagtttgctttctggaaggaggaggc
tgttgttagtctaggggaagagataccttcctctcccccaatgcaatgat
atcagctctgagattggcatatagagccccccgagagcccaccagaccaa
gccctagagccaagccctaccaggcatgtaggggggggggggg
gaattccaggacagccaggactctacaaaatgagattctgtctcaaaaaa
tgtgagaagggggtgggattgggacagggagagagaaaatgtaaatatgg
tttttaggtggtagtactctgatcccaacacttgggaggtagaggcagga
ggatcaggccgctcagctgcacagtaagttcaaggccagctgagatacct
gagactcctgtctcagtaaaagggtcaggagatgatgatgtatacacagt
attatttccgaggcagttgcagaatctgcagacctctctaagatcagata
ctaccccaaggactgctgtgttcaccacaggaaggaccaacagaaacagt
caagctggccagatgtagcagccagaagaacaaatgtctcccgtcaaatt
ggatcttgtggtcaagataaaaaacaaatgttactttcccaagtattttg
taggctgagattgcaacagaaaaactcatggatatctaagtttcccatct
gagtttgctcagaacttattgaattactgaagtgtcagacaccctctccc
ctgccctcgggtatctcgtgtgaggatggggtggatacaattgggagcct
gcccatccttctcccattctctatgtctccttgctaaaggagatcctaat
tgcatccctgtgttctggggattagtatgtgacccagttctgacctataa
gatttaaaaagaggtctgctgggagttttgggggaatagttttcctccct
gctttaaagaacgggggatggtactggagagattgctcagtggttaagag
cagtaactgctcttcttgaggtcctgagtttaattctcagtggctcataa
ccatctgtagtgggatctgatgccctcttctggtgtgtctgaagacagct
tcagtgtatcattttaaaaaaaaaaaaaaaaaggctggtggtggctcata
cctttgatcccagactggggaggcagaggcagtccggatcagttctagga

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_137265405_137266147
seq2: B6Ng01-082I23.b_48_790 (reverse)

seq1  CCCCCCCCCCCCCTACATGCCTGGTAGGGCTTGGCTCTAGGGCTGGGTCT  50
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CCCCCCCCCCCCCTACATGCCTGGTAGGGCTTGGCTCTAGGGCTTGGTCT  50

seq1  GGTGGGCTCTCGGGGGGCTCTATATGCCAATCTCAGAGCTGATATCATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGCTCTCGGGGGGCTCTATATGCCAATCTCAGAGCTGATATCATTG  100

seq1  CATTGGGGGAGAGGAAGGTATCTCTTCCCCTAGACTAACAACAGCCTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGGGGAGAGGAAGGTATCTCTTCCCCTAGACTAACAACAGCCTCCT  150

seq1  CCTTCCAGAAAGCAAACTGAGTTGGGGCATCTGCCAGAGATCCAGGCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCAGAAAGCAAACTGAGTTGGGGCATCTGCCAGAGATCCAGGCTCT  200

seq1  GGGCTCACATCAGTAGGCAAATGGCCAAACTCTGGAGGGTCAGTTGTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCACATCAGTAGGCAAATGGCCAAACTCTGGAGGGTCAGTTGTACA  250

seq1  AAGCCCCTCCCACAGAGTCTTGGTTGCACCCTCTTGGTACCTCATGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCCTCCCACAGAGTCTTGGTTGCACCCTCTTGGTACCTCATGAGAG  300

seq1  GATCAGGCAAGCTGGGGTGGTTAGAGCCCGTGCCGGGCTCGACAGAGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGGCAAGCTGGGGTGGTTAGAGCCCGTGCCGGGCTCGACAGAGTGA  350

seq1  GCCGTGCTTCCCTCGGGTCTGACCTTGCTCTCCCGTCTCTGTTGCAGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTGCTTCCCTCGGGTCTGACCTTGCTCTCCCGTCTCTGTTGCAGAAC  400

seq1  ACAGATCTGTTTGAGATGATTGAAAAGATGCAGGTAAGGATGGGCCAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCTGTTTGAGATGATTGAAAAGATGCAGGTAAGGATGGGCCAGGG  450

seq1  AGCCCCAGAACCAAACTGCCTAGTCTAAAGGTGGATGTCCCCTCTGCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCAGAACCAAACTGCCTAGTCTAAAGGTGGATGTCCCCTCTGCAGA  500

seq1  GCCTTGAAGGACTAGTTGTTAGGCACCTGCCTCCTCTCTAACTATGAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAAGGACTAGTTGTTAGGCACCTGCCTCCTCTCTAACTATGAACT  550

seq1  CTTCTGGGCTCCCAGGGTCCCCCAGCAGGCCATCCCCACATGTACATACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGGCTCCCAGGGTCCCCCAGCAGGCCATCCCCACATGTACATACC  600

seq1  CACCCAGCTCATCAGAGTCCTGGTAGGCTCCTCTGCAGGAACCCCATGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGCTCATCAGAGTCCTGGTAGGCTCCTCTGCAGGAACCCCATGCA  650

seq1  GAGTGGAGGAGGGGACAGATGGGTGCCGGGAGGTATTAATGAGCCAGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGAGGAGGGGACAGATGGGTGCCGGGAGGTATTAATGAGCCAGGAA  700

seq1  GCCTGCCTCCCAGCCCTGGCCTGTATGTGGCATGGGTGAATTC  743
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCTCCCAGCCCTGGCCTGTATGTGGCATGGGTGAATTC  743

seq1: chr4_137135510_137136509
seq2: B6Ng01-082I23.g_69_1068

seq1  GAATTCCAGGACAGCCAGGACTCTACAAAATGAGATTCTGTCTCAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGACTCTACAAAATGAGATTCTGTCTCAAAAAA  50

seq1  TGTGAGAAGGGGGTGGGATTGGGACAGGGAGAGAGAAAATGTAAATATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGAAGGGGGTGGGATTGGGACAGGGAGAGAGAAAATGTAAATATGG  100

seq1  TTTTTAGGTGGTAGTACTCTGATCCCAACACTTGGGAGGTAGAGGCAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGGTGGTAGTACTCTGATCCCAACACTTGGGAGGTAGAGGCAGGA  150

seq1  GGATCAGGCCGCTCAGCTGCACAGTAAGTTCAAGGCCAGCTGAGATACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAGGCCGCTCAGCTGCACAGTAAGTTCAAGGCCAGCTGAGATACCT  200

seq1  GAGACTCCTGTCTCAGTAAAAGGGTCAGGAGATGATGATGTATACACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTCCTGTCTCAGTAAAAGGGTCAGGAGATGATGATGTATACACAGT  250

seq1  ATTATTTCCGAGGCAGTTGCAGAATCTGCAGACCTCTCTAAGATCAGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTCCGAGGCAGTTGCAGAATCTGCAGACCTCTCTAAGATCAGATA  300

seq1  CTACCCCAAGGACTGCTGTGTTCACCACAGGAAGGACCAACAGAAACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCCAAGGACTGCTGTGTTCACCACAGGAAGGACCAACAGAAACAGT  350

seq1  CAAGCTGGCCAGATGTAGCAGCCAGAAGAACAAATGTCTCCCGTCAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGGCCAGATGTAGCAGCCAGAAGAACAAATGTCTCCCGTCAAATT  400

seq1  GGATCTTGTGGTCAAGATAAAAAACAAATGTTACTTTCCCAAGTATTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTGTGGTCAAGATAAAAAACAAATGTTACTTTCCCAAGTATTTTG  450

seq1  TAGGCTGAGATTGCAACAGAAAAACTCATGGATATCTAAGTTTCCCATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTGAGATTGCAACAGAAAAACTCATGGATATCTAAGTTTCCCATCT  500

seq1  GAGTTTGCTCAGAACTTATTGAATTACTGAAGTGTCAGACACCCTCTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGCTCAGAACTTATTGAATTACTGAAGTGTCAGACACCCTCTCCC  550

seq1  CTGCCCTCGGGTATCTCGTGTGAGGATGGGGTGGATACAATTGGGAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTCGGGTATCTCGTGTGAGGATGGGGTGGATACAATTGGGAGCCT  600

seq1  GCCCATCCTTCTCCCATTCTCTATGTCTCCTTGCTAAAGGAGATCCTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATCCTTCTCCCATTCTCTATGTCTCCTTGCTAAAGGAGATCCTAAT  650

seq1  TGCATCCCTGTGTTCTGGGGATTAGTATGTGACCCAGTTCTGACCTATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCCTGTGTTCTGGGGATTAGTATGTGACCCAGTTCTGACCTATAA  700

seq1  GATTTAAAAAGAGGTCTGCTGGGAGTTTTGGGGGAATAGTTTTCCTCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAAAAAGAGGTCTGCTGGGAGTTTTGGGGGAATAGTTTTCCTCCCT  750

seq1  GCTTTAAAGAACGGGGGATGGTACTGGAGAGATTGCTCAGTGGTTAAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAAAGAACGGGGGATGGTACTGGAGAGATTGCTCAGTGGTTAAGAG  800

seq1  CAGTAACTGCTCTTCTTGAGGTCCTGAGTTTAATTCTCAGTGGCTCATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAACTGCTCTTCTTGAGGTCCTGAGTTTAATTCTCAGTGGCTCATAA  850

seq1  CCATCTGTAGTGGGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGTAGTGGGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCT  900

seq1  ACAGTGTATTCATTTT-AAAAAAAAAAAAAAAAGGCTGGTGGTGGCTCAT  949
       ||||||| ||||||| |||||||||||||||||||||||||||||||||
seq2  TCAGTGTA-TCATTTTAAAAAAAAAAAAAAAAAGGCTGGTGGTGGCTCAT  949

seq1  ACCTTTGATCCCAGCACTGGGGAGGCAGAGGCAGT-CGGATCAGTTCTAG  998
      |||||||||||||| |||||||||||||||||||| ||||||||||||||
seq2  ACCTTTGATCCCAG-ACTGGGGAGGCAGAGGCAGTCCGGATCAGTTCTAG  998

seq1  GA  1000
      ||
seq2  GA  1000