BAC Information

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BAC

Clone NameB6Ng01-083A08
Chromosome4 (Build37)
Map Location 12,903,442 - 12,904,647
singlet/doubletsinglet
Overlap geneOTTMUSG00000004461
Upstream geneTmem67, C430048L16Rik, LOC230010, LOC623671, LOC100039958, Rbm12b, 6720467C03Rik, LOC545592
Downstream geneLOC100039988, Runx1t1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083A08.bB6Ng01-083A08.g
ACCDH897398DH897399
length1,1921,135
definitionDH897398|Mus musculus domesticus DNA, BAC clone: B6Ng01-083A08, 5' end.DH897399|Mus musculus domesticus DNA, BAC clone: B6Ng01-083A08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacttaatatgacacattcatgtattaagctgaaactacttttc
ctccaaaatattttctattactcagtcatacatttacaacaaggcaccag
aaaccttacaaggtaaatgccctacttcccaactcctcctatctcaaggc
tcagtacacttgttaacatgctgattcaatggattcctgtgcactctttt
caagacaatcatgtcttactcgtctccttccagagattccacaacattgt
aatagcttatagagatttctaagaaacactggatcaagtaatacctacgt
ggctttgatagtaagcatcttaaaagtgtgtgatgactgcaagactttca
gtcctgaatatccacaatactaactccatagcaaatccaatagcactttg
tatcaaattgcaatggctgcacaatgcgaggtcagctgaagtagggaagg
ccctgacaaatattcatgggaagtcttcttatctaaactagacacagttt
aagtctgtaaccacttaatagtcacagatgcctttggcatggcaaactca
aggctttatcttgctctccctgtactcgtcagctccgtggacacctgtga
ggtgactgagagtctccatctccaaacatagcttttcaggcttaatcaga
tcactcccagcaacggtgagggtcacaaggggtgagatcgcaggcttttc
attatatgcttagtttggtagccattgatgttctttttctactctgtgaa
actctttatcttttctgtggacataactcactcaaaagtagcaaagtagt
accatgacattatggtcatcgcgtatcaactaggtaagagtcaaacgtgt
ttgatgttcattagtcctcggttgtttctctgacattatcaatatggata
aaatcactcactagggaaattaaaagcattaaaaaacaattgctgaagga
aactctgttagttaaaatcctatgccaaatgacaggcatcaaagtttgac
agacaaactaatcgctatgttagatttgaaatgcaagacaccttcatgtt
ctgatcttaaacttttccatcacaagcaatggcctcagaacaatttattc
agcaaatcatagttgtgatctctagactagcactcagatgattgttggat
atataaaattgcatctatatagaatacttccagtacatactt
gaattctcaccttaggaatactgaatggctgagaacacctgaaaaatgtt
cagcatccttaatcatcagggaaatgcaaatcaaaacaattctgagagtc
cacctcacaccagtcagaatggttaagatcaaaaattcaggtgacagcag
atgctgtcgaggatgtggagaaagaggaacactcctccattgttggtggg
attgcaagcttttacaaccactctggaaatcagtttggcggtttctcaga
aaattggacatagtactaccggaggatcccgcagtacctctcctggacat
atatccagaagatgttccaactggtaagaaggacacatgctccactatgt
tcatagcagccttatttataatagacagaagctggaaagaacccagatgc
ccctcaacagtggaatggatacagaaaacatggtacatttacacaatgga
gtactactcagctattaaaaaatgaatttatgaaattcctaggcaaatgg
atgaacctggagggcatcatcctgagtgaggtaaccaatcacaaaagaac
tcacatgatatatactcactgacaagtggatatttagcccagaaacttag
aatacccaatatataagatacaatctgcaaaacacatgaaactcaagaag
aatgaagtccaaagtgtggacactttgccccttcttagaattggggacaa
gacacccattaaatagtacagagacaaagtttggagctgagacaaaagga
tggaccatctagagactgccataccctgggatccatcccataatcagcct
tccaaacactgacaccattgcacacactaacaagattttgctgaaaggac
cctgatattgctgtctcttgtgaggctatgttcttgcctaacaatacaaa
agtggatgctcacgtcagctattagatggatcacagacttcccaatggag
gagctagagaattacccaggagctaaaggggtctgcaaccctatagggga
acaacatatgaactaacaggtactcccacaacacactactggaactcgtg
ttctagagcatatgatcagaaaatggcctagttggacttcagtggaaaga
gaaggctcattggttctgtaaccttaaatggctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_12903442_12904647
seq2: B6Ng01-083A08.b_46_1237 (reverse)

seq1  AAGTATGTACTGAAAGTATCTAATATAGATGCATATTTTAATAATCTAAC  50
      |||||||||||| ||||||   ||||||||||| ||||||   ||| |||
seq2  AAGTATGTACTGGAAGTATTCTATATAGATGCA-ATTTTATATATCCAAC  49

seq1  AAATCATTCTGAGTGCTAAGTCTAGAGAATCACAAACTATGATTTGCCTT  100
       ||||| |||||||||| ||||||||| ||||| |||||||||||||  |
seq2  -AATCA-TCTGAGTGCT-AGTCTAGAG-ATCAC-AACTATGATTTGC--T  92

seq1  GAATAAATATGTCTGAGGCCATTGC-TGTGATGGGAAAAGTTTAAGAATC  149
      ||||||||   |||||||||||||| |||||| ||||||||||||| |||
seq2  GAATAAATTGTTCTGAGGCCATTGCTTGTGAT-GGAAAAGTTTAAG-ATC  140

seq1  AGAACCATGAAGGTGTCTTGCATTTCAAATCTAACATAGCGATTAGTTTG  199
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAA-CATGAAGGTGTCTTGCATTTCAAATCTAACATAGCGATTAGTTTG  189

seq1  TCTGTCAAACTTTGATTGCCTTGTCATTTTGGCATAGGATTTTAACTAAC  249
      ||||||||||||||| |||| ||||| |||||||||||||||||||||||
seq2  TCTGTCAAACTTTGA-TGCC-TGTCA-TTTGGCATAGGATTTTAACTAAC  236

seq1  AGAGTTTCCTTCAGCAATTGTTTTTTAATGCTTTTTAATTTCCCTAGTGA  299
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGAGTTTCCTTCAGCAATTGTTTTTTAATGC-TTTTAATTTCCCTAGTGA  285

seq1  GTGATTTTATCCATATTGATAATGTCAGAGAAACAACCGAGGACTAATGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTTATCCATATTGATAATGTCAGAGAAACAACCGAGGACTAATGA  335

seq1  ACATCAAACACGTTTGACTCTTACCTAGTTGATACGCGATGACCATAATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAAACACGTTTGACTCTTACCTAGTTGATACGCGATGACCATAATG  385

seq1  TCATGGTACTACTTTGCTACTTTTGAGTGAGTTATGTCCACAGAAAAGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTACTACTTTGCTACTTTTGAGTGAGTTATGTCCACAGAAAAGAT  435

seq1  AAAGAGTTTCACAGAGTAGAAAAAGAACATCAATGGCTACCAAACTAAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTTTCACAGAGTAGAAAAAGAACATCAATGGCTACCAAACTAAGC  485

seq1  ATATAATGAAAAGCCTGCGATCTCACCCCTTGTGACCCTCACCGTTGCTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATGAAAAGCCTGCGATCTCACCCCTTGTGACCCTCACCGTTGCTG  535

seq1  GGAGTGATCTGATTAAGCCTGAAAAGCTATGTTTGGAGATGGAGACTCTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGATCTGATTAAGCCTGAAAAGCTATGTTTGGAGATGGAGACTCTC  585

seq1  AGTCACCTCACAGGTGTCCACGGAGCTGACGAGTACAGGGAGAGCAAGAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACCTCACAGGTGTCCACGGAGCTGACGAGTACAGGGAGAGCAAGAT  635

seq1  AAAGCCTTGAGTTTGCCATGCCAAAGGCATCTGTGACTATTAAGTGGTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTTGAGTTTGCCATGCCAAAGGCATCTGTGACTATTAAGTGGTTA  685

seq1  CAGACTTAAACTGTGTCTAGTTTAGATAAGAAGACTTCCCATGAATATTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTTAAACTGTGTCTAGTTTAGATAAGAAGACTTCCCATGAATATTT  735

seq1  GTCAGGGCCTTCCCTACTTCAGCTGACCTCGCATTGTGCAGCCATTGCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGGCCTTCCCTACTTCAGCTGACCTCGCATTGTGCAGCCATTGCAA  785

seq1  TTTGATACAAAGTGCTATTGGATTTGCTATGGAGTTAGTATTGTGGATAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATACAAAGTGCTATTGGATTTGCTATGGAGTTAGTATTGTGGATAT  835

seq1  TCAGGACTGAAAGTCTTGCAGTCATCACACACTTTTAAGATGCTTACTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACTGAAAGTCTTGCAGTCATCACACACTTTTAAGATGCTTACTAT  885

seq1  CAAAGCCACGTAGGTATTACTTGATCCAGTGTTTCTTAGAAATCTCTATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCACGTAGGTATTACTTGATCCAGTGTTTCTTAGAAATCTCTATA  935

seq1  AGCTATTACAATGTTGTGGAATCTCTGGAAGGAGACGAGTAAGACATGAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTACAATGTTGTGGAATCTCTGGAAGGAGACGAGTAAGACATGAT  985

seq1  TGTCTTGAAAAGAGTGCACAGGAATCCATTGAATCAGCATGTTAACAAGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGAAAAGAGTGCACAGGAATCCATTGAATCAGCATGTTAACAAGT  1035

seq1  GTACTGAGCCTTGAGATAGGAGGAGTTGGGAAGTAGGGCATTTACCTTGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGAGCCTTGAGATAGGAGGAGTTGGGAAGTAGGGCATTTACCTTGT  1085

seq1  AAGGTTTCTGGTGCCTTGTTGTAAATGTATGACTGAGTAATAGAAAATAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTCTGGTGCCTTGTTGTAAATGTATGACTGAGTAATAGAAAATAT  1135

seq1  TTTGGAGGAAAAGTAGTTTCAGCTTAATACATGAATGTGTCATATTAAGT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGGAAAAGTAGTTTCAGCTTAATACATGAATGTGTCATATTAAGT  1185

seq1  AGAATTC  1206
      |||||||
seq2  AGAATTC  1192