BAC Information

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BAC

Clone NameB6Ng01-083A16
Chromosome4 (Build37)
Map Location 94,699,591 - 94,875,432
singlet/doubletdoublet
Overlap geneLOC100039265, LOC665029, Jun
Upstream gene5830433M19Rik, Plaa, LOC667250, Lrrc19, Ift74, Tek, 4930579C15Rik, LOC100039252, Mysm1
Downstream geneLOC100042411, 2310009E04Rik, Hook1, Cyp2j13, LOC242546, LOC546837
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083A16.bB6Ng01-083A16.g
ACCDH897414DH897415
length1,165912
definitionDH897414|Mus musculus domesticus DNA, BAC clone: B6Ng01-083A16, 5' end.DH897415|Mus musculus domesticus DNA, BAC clone: B6Ng01-083A16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,699,591 - 94,700,787)(94,874,528 - 94,875,432)
sequence
gaattcttagttctcaaggcctctctacctcctgagactcattcttcatt
cctgacataggaattatgctataaatagagtctgtcctggctttctggtc
actggctggtggaacaagggattttctgatacaagttcttcaccagactg
ttttaaaaaaagataatgtgtttatacttgatgctctagaggtaacaaca
gctatacttatgacccagcataccacaaaaaaagtgtgttggctaggtct
tctaatttttaagtgagggttagagggtgggcagaacagggagcgtgaag
tctgccctttggcaccatctaccagcattgttttttttaaagatattatt
tatgattatacataagtacactgtagctgtcttcaaatgcgccagaagag
ggcatcaggtctcattatgggtggttgtgagccaccatgtggttgctggg
atttgaactcaggacctttgggagagcagtcagtgctcttacccgctgag
ccatttctccagccctaccggcattggttttaacccaacgatcccgtgga
ggagagttgtggtgtatttatttaatgtattggatatctactgatacttt
atttgatttatacttctaatctatgggctagtaaagagagcatatagcaa
atctcattatctcactttaaagaaacaagagtctttcatctctgtatcac
ttttcccattccaacaatcaccactttccttcttcagtttttctcatgta
aaaacatggattttgtttttgtatagacatcaaggggcagggcaaaccac
agcacacttgagcaaacagaaggtctagctgacttgggatgtaaggaaac
acattaagttttgagtctgctactgtgatttcacagtgagcatcaaatcc
tcgctgagactcaggacattttcaaaggggtgcttctggtttgtctgtgc
ttgggaaaaagctgcttctaagttggcagaaactactggttatcacattt
gctaccagacatgccagatcaaagcagacatgtatccagactcagaacct
tgaacagtgaatagcagctccccacccccacactatatgatctttccctt
acgaatgcagctactgctcgaggatgcttactgccatgtgatgtttaaag
gaaaatccaactttt
gaattcacagcacagtgctctgtaaggcctctacagcagagacagcagat
ttctctattggaagtctcggcacagctcctaatggcacctcggcttctcc
cctgaggctgcgctccagactaagagcctgttcttctctggggagataaa
gtagcgcctcaaatttagaaatcagccttcaaccctgaaaagatttcact
ttatttcatgccttaatccatccttccatggtggagccctgctttgtcta
cagtctacactcagagaggtttggcctctggaaggcaccagcatctcttg
gaagaacatccacatggtgcctctgctgtcttctcagaagttcccaaagt
tgccagaggatgagaataattgcctgctctgtctatacttacctgaatct
ggacctctggggtggaggggtagggggcagcagcggtgagtgactattct
cttcccactgcctgtctcctgctagagtatctctttggtcacaataaaaa
ttacaagtaatgacttagaggactcaggaacctaggggatgcagggctgg
tccttctatggatgagaggaggcagagtgggcagagcagtggatcagatg
ggcaggaccacacagaagaaccacagcaatatcaggtttcttggaaccct
gaagggagaagaaaacagccatccctgaggtgcggatcttcccaagaaag
agaatgccatttaaggaaaagagtgatccaagctgaaaggcagattttgc
ttttcccagccagatcagagttcaaaggtcctacgtccagcgcatctgcc
agaatattccacatgaccacagacattccttcctctgggttcttacacga
caaagagcagaggggttgttcgacatttctggatctcacccatcttcccc
atgaccagactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_94699591_94700787
seq2: B6Ng01-083A16.b_45_1209

seq1  GAATTCTTAGTTCTCAAGGCCTCTCTACCTCCTGAGACTCATTCTTCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGTTCTCAAGGCCTCTCTACCTCCTGAGACTCATTCTTCATT  50

seq1  CCTGACATAGGAATTATGCTATAAATAGAGTCTGTCCTGGCTTTCTGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACATAGGAATTATGCTATAAATAGAGTCTGTCCTGGCTTTCTGGTC  100

seq1  ACTGGCTGGTGGAACAAGGGATTTTCTGATACAAGTTCTTCACCAGACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTGGTGGAACAAGGGATTTTCTGATACAAGTTCTTCACCAGACTG  150

seq1  TTTTAAAAAAAGATAATGTGTTTATACTTGATGCTCTAGAGGTAACAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAAAAGATAATGTGTTTATACTTGATGCTCTAGAGGTAACAACA  200

seq1  GCTATACTTATGACCCAGCATACCACAAAAAAAGTGTGTTGGCTAGGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATACTTATGACCCAGCATACCACAAAAAAAGTGTGTTGGCTAGGTCT  250

seq1  TCTAATTTTTAAGTGAGGGTTAGAGGGTGGGCAGAACAGGGAGCGTGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTTTTAAGTGAGGGTTAGAGGGTGGGCAGAACAGGGAGCGTGAAG  300

seq1  TCTGCCCTTTGGCACCATCTACCAGCATTGTTTTTTTTAAAGATATTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCCTTTGGCACCATCTACCAGCATTGTTTTTTTTAAAGATATTATT  350

seq1  TATGATTATACATAAGTACACTGTAGCTGTCTTCAAATGCGCCAGAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTATACATAAGTACACTGTAGCTGTCTTCAAATGCGCCAGAAGAG  400

seq1  GGCATCAGGTCTCATTATGGGTGGTTGTGAGCCACCATGTGGTTGCTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCAGGTCTCATTATGGGTGGTTGTGAGCCACCATGTGGTTGCTGGG  450

seq1  ATTTGAACTCAGGACCTTTGGGAGAGCAGTCAGTGCTCTTACCCGCTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAACTCAGGACCTTTGGGAGAGCAGTCAGTGCTCTTACCCGCTGAG  500

seq1  CCATTTCTCCAGCCCTACCGGCATTGGTTTTAACCCAACGATCCCGTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCTCCAGCCCTACCGGCATTGGTTTTAACCCAACGATCCCGTGGA  550

seq1  GGAGAGTTGTGGTGTATTTATTTAATGTATTGGATATCTACTGATACTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGTTGTGGTGTATTTATTTAATGTATTGGATATCTACTGATACTTT  600

seq1  ATTTGATTTATACTTCTAATCTATGGGCTAGTAAAGAGAGCATATAGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATTTATACTTCTAATCTATGGGCTAGTAAAGAGAGCATATAGCAA  650

seq1  ATCTCATTATCTCACTTTAAAGAAACAAGAGTCTTTCATCTCTGTATCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATTATCTCACTTTAAAGAAACAAGAGTCTTTCATCTCTGTATCAC  700

seq1  TTTTCCCATTCCAACAATCACCACTTTCCTTCTTCAG-TTTTCTCATGTA  749
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTTCCCATTCCAACAATCACCACTTTCCTTCTTCAGTTTTTCTCATGTA  750

seq1  AAAACATGGATTTTGTTTTTGTATAGACATCAAGGGGCAGGGCAAACCAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATGGATTTTGTTTTTGTATAGACATCAAGGGGCAGGGCAAACCAC  800

seq1  AGCACACTTGAGCAAACAGAAGGTCTAGCTGACTTGGGATGTAAGGAAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACTTGAGCAAACAGAAGGTCTAGCTGACTTGGGATGTAAGGAAAC  850

seq1  ACATTAAGTTTTGAGTCTGCTACTGTGATTTCACAGTGAGCATCAAATCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAAGTTTTGAGTCTGCTACTGTGATTTCACAGTGAGCATCAAATCC  900

seq1  TCGCTGAGACTCAGGACATTTTCAAAGGGGGTGCTTCTGGTTTGTCTTGG  949
      |||||||||||||||||||||||||| ||||||||||||||||||||  |
seq2  TCGCTGAGACTCAGGACATTTTCAAA-GGGGTGCTTCTGGTTTGTCT--G  947

seq1  TGCTTGGGAAAAAAGCTGCTTCTAAGTTGGGCAAGAAACAACTGGTTATC  999
      |||||||| |||||||||||||||||||||   |||||| ||||||||| 
seq2  TGCTTGGG-AAAAAGCTGCTTCTAAGTTGG--CAGAAACTACTGGTTAT-  993

seq1  CACATTTGGCTAACCAGACATGCCAGATCAAAAGCAGGACATGAATCCAG  1049
      ||||||| ||| ||||||||||||||||| |||||| |||||| ||||||
seq2  CACATTT-GCT-ACCAGACATGCCAGATC-AAAGCA-GACATGTATCCAG  1039

seq1  ATCTCAAGACCCTAGAACAAGTTGAAATAGCAAGCTCCCCACCCCCACAC  1099
      | ||| ||| ||| |||| |||   |||||| |||||||||||||  |||
seq2  A-CTC-AGAACCTTGAAC-AGT--GAATAGC-AGCTCCCCACCCC--CAC  1081

seq1  ACTATTATGATCTATTCTCCTTACAGAATGCAGCCAAGCTGCTCGGAGGA  1149
      |||| |||||||| ||| |||||| ||||||||| |  |||||| |||||
seq2  ACTA-TATGATCT-TTC-CCTTAC-GAATGCAGCTA--CTGCTC-GAGGA  1124

seq1  GTGCTAACTGCAATGTTTGATGTATAAAAGAGAAAAATCCCAACTTTT  1197
       |||| ||||| |||  |||||| |||   || ||||| |||||||||
seq2  -TGCTTACTGCCATG--TGATGTTTAA---AGGAAAAT-CCAACTTTT  1165

seq1: chr4_94874528_94875432
seq2: B6Ng01-083A16.g_68_974 (reverse)

seq1  TGGTCCTGGGGAAGATGGGTGAGGTTCAGAAATGTCGAACAACCCCTCTG  50
      ||||| ||||||||||||||||| | ||||||||||||||||||||||||
seq2  TGGTCATGGGGAAGATGGGTGAGATCCAGAAATGTCGAACAACCCCTCTG  50

seq1  CTCTTTGTCGTGTAAGAA-CCAGAGGAAGGAATGTCTGTGGTCATGTGGA  99
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTCTTTGTCGTGTAAGAACCCAGAGGAAGGAATGTCTGTGGTCATGTGGA  100

seq1  ATATTCTGGCAGATGCGCTGGACGTAGGACCTTTGAACTCTGATCTGGCT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTGGCAGATGCGCTGGACGTAGGACCTTTGAACTCTGATCTGGCT  150

seq1  GGG-AAAGCAAAATCTGCCTTTCAGCTTGGATCACTCTTTTCCTTAAATG  198
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAGCAAAATCTGCCTTTCAGCTTGGATCACTCTTTTCCTTAAATG  200

seq1  GCATTCTCTTTCTTGGGAAGATCCGCACCTCAGGGATGGCTGTTTTCTTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTCTTTCTTGGGAAGATCCGCACCTCAGGGATGGCTGTTTTCTTC  250

seq1  TCCCTTCAGGGTTCCAAGAAACCTGATATTGCTGTGGTTCTTCTGTGTGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCAGGGTTCCAAGAAACCTGATATTGCTGTGGTTCTTCTGTGTGG  300

seq1  TCCTGCCCATCTGATCCACTGCTCTGCCCACTCTGCCTCCTCTCATCCAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCCCATCTGATCCACTGCTCTGCCCACTCTGCCTCCTCTCATCCAT  350

seq1  AGAAGGACCAGCCCTGCATCCCCTAGGTTCCTGAGTCCTCTAAGTCATTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGACCAGCCCTGCATCCCCTAGGTTCCTGAGTCCTCTAAGTCATTA  400

seq1  CTTGTAATTTTTATTGTGACCAAAGAGATACTCTAGCAGGAGACAGGCAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAATTTTTATTGTGACCAAAGAGATACTCTAGCAGGAGACAGGCAG  450

seq1  TGGGAAGAGAATAGTCACTCACCGCTGCTGCCCCCTACCCCTCCACCCCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGAGAATAGTCACTCACCGCTGCTGCCCCCTACCCCTCCACCCCA  500

seq1  GAGGTCCAGATTCAGGTAAGTATAGACAGAGCAGGCAATTATTCTCATCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCCAGATTCAGGTAAGTATAGACAGAGCAGGCAATTATTCTCATCC  550

seq1  TCTGGCAACTTTGGGAACTTCTGAGAAGACAGCAGAGGCACCATGTGGAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAACTTTGGGAACTTCTGAGAAGACAGCAGAGGCACCATGTGGAT  600

seq1  GTTCTTCCAAGAGATGCTGGTGCCTTCCAGAGGCCAAACCTCTCTGAGTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCCAAGAGATGCTGGTGCCTTCCAGAGGCCAAACCTCTCTGAGTG  650

seq1  TAGACTGTAGACAAAGCAGGGCTCCACCATGGAAGGATGGATTAAGGCAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGTAGACAAAGCAGGGCTCCACCATGGAAGGATGGATTAAGGCAT  700

seq1  GAAATAAAGTGAAATCTTTTCAGGGTTGAAGGCTGATTTCTAAATTTGAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAAGTGAAATCTTTTCAGGGTTGAAGGCTGATTTCTAAATTTGAG  750

seq1  GCGCTACTTTATCTCCCCAGAGAAGAACAGGCTCTTAGTCTGGAGCGCAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTACTTTATCTCCCCAGAGAAGAACAGGCTCTTAGTCTGGAGCGCAG  800

seq1  CCTCAGGGGAGAAGCCGAGGTGCCATTAGGAGCTGTGCCGAGACTTCCAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGGGAGAAGCCGAGGTGCCATTAGGAGCTGTGCCGAGACTTCCAA  850

seq1  TAGAGAAATCTGCTGTCTCTGCTGTAGAGGCCTTACAGAGCACTGTGCTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAATCTGCTGTCTCTGCTGTAGAGGCCTTACAGAGCACTGTGCTG  900

seq1  TGAATTC  905
      |||||||
seq2  TGAATTC  907