BAC Information

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BAC

Clone NameB6Ng01-083M17
Chromosome4 (Build37)
Map Location 72,828,301 - 72,829,339
singlet/doubletsinglet
Overlap genenone
Upstream geneTle1, Aldoa-ps2, EG384113, LOC667713, LOC100039698
Downstream geneOTTMUSG00000001246, LOC100039726, LOC667722, LOC623115, OTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef, LOC667768, LOC545637, LOC623272, OTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik, Frmd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083M17.bB6Ng01-083M17.g
ACCDH897957DH897958
length1,1961,034
definitionDH897957|Mus musculus domesticus DNA, BAC clone: B6Ng01-083M17, 5' end.DH897958|Mus musculus domesticus DNA, BAC clone: B6Ng01-083M17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagtatttctacttaattttgtctgaatgacatgactattggtg
agagtagaacattgaagtcacgcacgatcaatgtgtaagggtcaatatgt
tatgtaagtgtagtagtacatatttcatgaacttgtgtgcccttgtgttt
ggtatatagatcttaagaactgcaacattctctgggtggactttgccttt
catgaatgtatagtgtcttccttatatcttctgattagctttggttttaa
gtgtattttatgaaatagtgaaatggctagatcagcttgccttttaggtc
catttgcttggaatttctttttcttttttcccatttaccaagagctgata
catctccttaatcttaatgtgtgtttcttagactcagtagaaggattaat
cctgttttgcatccattctctaagtatatttacttttattggggaatcga
gaccattcatattgagagttttcaatgagccatgcttgttgattcctgtt
attttcttgtgtagttcccccttttttcccatttgatggattaggattaa
ttattcctcatgtttccttgggtgtttttaacttatccaagttgattttt
ttttcatctgtcaccttctgtgaagctagatttgtagataaaatttgctt
ttatggtggatgcttttcacttgatcttagtcaaaaggcggagaagtgat
gtgggatgtttttctttctccttctattgtgattgataattttgtgggat
ataggaatctgggaagcatctgtgttctctcagtttgtagaccatccatt
caatgctttctggctttcagaatttccattgaaatttcaggcatgatttt
aatgactctgcctttatatgttgcttggtaattttcttctgcagcttttc
attttctctcattgttctctgtgtaaactgttttgattattatgcatgaa
agaatatagttttttctgttcctatctattttgtgtttgtatattattta
ctctataaggactctaggtagtagagaactttcttcatatttttttttta
ccttttctttttttttcaatgtataagatttagctcattacattccaggc
taacaaagtcccaaaccacactccctttgactgggtctcgactgggcctt
atagtgcagaccaatggcctctttcctgagtgccgcaaaggcaact
gaattcagttagaggctcctttgaagtgactgtaataccatatgaaataa
atgacagattaatgatgattaagtcagatcacatactgaagtactttagt
gtagaatgtgtataatctttccaatcagcattaactaatgttaggcaaca
tagagacaactattctgagcctgacaataaacgtgcctatcagaaacaat
attctcatcagttatttctcatcttagtgactgaaataacagacaaaaat
gtacagaaaaaaaaaacaatgtaaaggagggaaaatttattctgattatg
ttttcaaagggttcatcccatggttcactggccggatatgtatgagcaaa
tctttatgacagtgtgaatatatgtcggtggagtactccacacttcatta
tagataggagacatagagaagaaatataaaaagaagccaggataagacac
agctcctaaggacatattcttatattttcaattaggcccttctttcaaat
ttataaggacctcaaaatactgttactactcagggaccttaattttcata
aatgagtttgtgggatatagtaaatattaaaaccatggtaattttttttg
tttgtttggttgtttttttttttttttttggtgttttttccccaatccat
ctttcacaaatgacatactgtatttcccttctacattgactgaaataaag
ctccaatttagttgcactcatcatgattatgttttcatggtgaacatatg
ccatgtcattgatgctgagctctggatcaactgtgagcttagagagatgt
tgcaggattatggattcaaaagaggaaagttgttcaccttccatatccgt
gcatgtaaaagataccctaagagggggaaacactgatattagctcataat
gatcatgcttctcttatggagccaagacaaagaaatatctggaaaacaga
tacccaaagttttattgtataggtgatatatagctttgaatagaaatgtt
ccctgctactcatgaattcgagagttatgagatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_72828301_72829339
seq2: B6Ng01-083M17.g_68_1101 (reverse)

seq1  GATCTCATAAACTCTTCGAATCCATGAGTATGCAGGGAACATTTCTTATT  50
      |||||||| ||||| |||||| |||||||| |||||||||||||| ||||
seq2  GATCTCAT-AACTC-TCGAATTCATGAGTA-GCAGGGAACATTTC-TATT  46

seq1  CAAAGCTATATAATCACCTATACAATAAAACCTTTGGGTTATCTGTTTTC  100
      ||||||||||| |||||||||||||||||| ||||||| |||||||||||
seq2  CAAAGCTATAT-ATCACCTATACAATAAAA-CTTTGGG-TATCTGTTTTC  93

seq1  CAGATATTTCTTTGTCTTGGCTCCATAAGAGAAGCCTGATCATTATGAGC  150
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAGATATTTCTTTGTCTTGGCTCCATAAGAGAAGCATGATCATTATGAGC  143

seq1  T-ATATCAGTGTTT-CCCCTCTTAGGGTATCTTTTACATGCACGGATATG  198
      | |||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TAATATCAGTGTTTCCCCCTCTTAGGGTATCTTTTACATGCACGGATATG  193

seq1  GAAGGTGAACAACTTTCCTCTTTTGAATCCATAATCCTGCAACATCTCTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGAACAACTTTCCTCTTTTGAATCCATAATCCTGCAACATCTCTC  243

seq1  TAAGCTCACAGTTGATCCAGAGCTCAGCATCAATGACATGGCATATGTTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTCACAGTTGATCCAGAGCTCAGCATCAATGACATGGCATATGTTC  293

seq1  ACCATGAAAACATAATCATGATGAGTGCAACTAAATTGGAGCTTTATTTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGAAAACATAATCATGATGAGTGCAACTAAATTGGAGCTTTATTTC  343

seq1  AGTCAATGTAGAAGGGAAATACAGTATGTCATTTGTGAAAGATGGATTGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATGTAGAAGGGAAATACAGTATGTCATTTGTGAAAGATGGATTGG  393

seq1  GGAAAAAACACCAAAAAAAAAAAAAAAAACAACCAAACAAACAAAAAAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAACACCAAAAAAAAAAAAAAAAACAACCAAACAAACAAAAAAAA  443

seq1  TTACCATGGTTTTAATATTTACTATATCCCACAAACTCATTTATGAAAAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCATGGTTTTAATATTTACTATATCCCACAAACTCATTTATGAAAAT  493

seq1  TAAGGTCCCTGAGTAGTAACAGTATTTTGAGGTCCTTATAAATTTGAAAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTCCCTGAGTAGTAACAGTATTTTGAGGTCCTTATAAATTTGAAAG  543

seq1  AAGGGCCTAATTGAAAATATAAGAATATGTCCTTAGGAGCTGTGTCTTAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCCTAATTGAAAATATAAGAATATGTCCTTAGGAGCTGTGTCTTAT  593

seq1  CCTGGCTTCTTTTTATATTTCTTCTCTATGTCTCCTATCTATAATGAAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTTCTTTTTATATTTCTTCTCTATGTCTCCTATCTATAATGAAGT  643

seq1  GTGGAGTACTCCACCGACATATATTCACACTGTCATAAAGATTTGCTCAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTACTCCACCGACATATATTCACACTGTCATAAAGATTTGCTCAT  693

seq1  ACATATCCGGCCAGTGAACCATGGGATGAACCCTTTGAAAACATAATCAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCCGGCCAGTGAACCATGGGATGAACCCTTTGAAAACATAATCAG  743

seq1  AATAAATTTTCCCTCCTTTACATTGTTTTTTTTTTCTGTACATTTTTGTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTTTCCCTCCTTTACATTGTTTTTTTTTTCTGTACATTTTTGTC  793

seq1  TGTTATTTCAGTCACTAAGATGAGAAATAACTGATGAGAATATTGTTTCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTTCAGTCACTAAGATGAGAAATAACTGATGAGAATATTGTTTCT  843

seq1  GATAGGCACGTTTATTGTCAGGCTCAGAATAGTTGTCTCTATGTTGCCTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGCACGTTTATTGTCAGGCTCAGAATAGTTGTCTCTATGTTGCCTA  893

seq1  ACATTAGTTAATGCTGATTGGAAAGATTATACACATTCTACACTAAAGTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGTTAATGCTGATTGGAAAGATTATACACATTCTACACTAAAGTA  943

seq1  CTTCAGTATGTGATCTGACTTAATCATCATTAATCTGTCATTTATTTCAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTATGTGATCTGACTTAATCATCATTAATCTGTCATTTATTTCAT  993

seq1  ATGGTATTACAGTCACTTCAAAGGAGCCTCTAACTGAATTC  1039
      |||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTATTACAGTCACTTCAAAGGAGCCTCTAACTGAATTC  1034