BAC Information

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BAC

Clone NameB6Ng01-085I02
Chromosome3 (Build37)4 (Build37)
Map Location 41,059,167 - 41,059,73766,580,495 - 66,580,561
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085I02.bB6Ng01-085I02.g
ACCDH899160DH899161
length1,00773
definitionDH899160|Mus musculus domesticus DNA, BAC clone: B6Ng01-085I02, 5' end.DH899161|Mus musculus domesticus DNA, BAC clone: B6Ng01-085I02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(41,059,167 - 41,059,737)(66,580,495 - 66,580,561)
sequence
gaattctttgttcagctatgaaccccatttttaatggggttatttgattt
tctggggtccaccttcttgagttctttatatatattggatattagtcccc
tatccgttttgggataggtaaagatcctttcccaatctgtttgtggcctt
tttgtcttattgacggtatcttttgccttgcagaagctttgcaattttat
gaggtcccatttatcgattcttgatcttacagcacaagccattgctgttc
tattcaggaatttttcccctgtacccatatctttgaggcttttacccact
atctcctctataagtttcagtgtctctggttttatgtggagttccttaat
ccacttagatttgaccttagtacaaggagataggtatggatcaattctca
ttcttctacataataactgccagttgtgccagcaccatttgttgaaaatg
ctgtcttttttccactggatggttttagctcccttgtcaaagatcaagtg
accataggtgtgtgagttcatctctgggtcttcaattctgttccattggt
ctacttgtctgtcactataccagtaccatgcattttttatcacaattgct
ctgtagtacatctttaggtcaggcatggtgattctaccagaggttctttt
atccttgagaaaagtttttgctatcctaggtattttgttattccagatga
atatgctgattgccctttctaattcgttgaagaattgagttggaattttg
atggggattgcatttgaatctgtagattgcttttggcaagatagtcattt
ttactatattgatcctgccaatccatgagcatgggagatcttttccatct
tctgagatcttctttaatttctttcttcagagacttgaagtttttatcat
acagatctttcactttccttagttagagtcacgccaagatatttatatta
ttgtgactattgagaagggtgttgtttccctaatttctttcagcctgttt
attcttt
aattttggaatctctactaccttgggagttcttgggatctggaagccggg
tgggggtggtggtggtggtggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059167_41059737
seq2: B6Ng01-085I02.b_47_617 (reverse)

seq1  TGGTATAGTGACAGACAAGCAGACCAATGGAATAGAATTGAAGACTCAGA  50
      ||||||||||||||||||| |||||||||||| |||||||||||| ||||
seq2  TGGTATAGTGACAGACAAGTAGACCAATGGAACAGAATTGAAGACCCAGA  50

seq1  AACGAATCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAA  100
       | |||  ||||||||||||||||||||||||| ||||||||||||||||
seq2  GATGAACTCACACACCTATGGTCACTTGATCTTTGACAAGGGAGCTAAAA  100

seq1  CCATCCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAAC  150

seq1  TGGTTGTTATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTG  200
      |||  ||||| ||||||||||||| |||||||||||  ||||||||||||
seq2  TGGCAGTTATTATGTAGAAGAATGAGAATTGATCCATACCTATCTCCTTG  200

seq1  TACTAAGGTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGA  250
      |||||||||||||||||||||||| ||||||| |||||||||||||||||
seq2  TACTAAGGTCAAATCTAAGTGGATTAAGGAACTCCACATAAAACCAGAGA  250

seq1  CACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTC  300
      ||||||||||||||||||||| |||||| ||||||||  |||||||||  
seq2  CACTGAAACTTATAGAGGAGATAGTGGGTAAAAGCCTCAAAGATATGGGT  300

seq1  ACAGGGGAAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATT  350
      |||||||||||||||||| |||||||||||||||||||||||||||||| 
seq2  ACAGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATC  350

seq1  GAGAATAGACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAA  400
       ||||| || |||||||||||||| ||| |||||||||||||||||||||
seq2  AAGAATCGATAAATGGGACCTCATAAAATTGCAAAGCTTCTGCAAGGCAA  400

seq1  AAGACACCGTCAATAAGACAAAAAGG-CACCAACAGATTGGGAAAGGATC  449
      |||| ||||||||||||||||||||| ||| |||||||||||||||||||
seq2  AAGATACCGTCAATAAGACAAAAAGGCCACAAACAGATTGGGAAAGGATC  450

seq1  TTTACCTATCCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGA  499
      ||||||||||| ||| | ||||||||||||||||||||||||||| ||||
seq2  TTTACCTATCCCAAAACGGATAGGGGACTAATATCCAATATATATAAAGA  500

seq1  ACTCAAGAAGGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGG  549
      |||||||||||||||  ||||||||||||||||||||||| |||||||||
seq2  ACTCAAGAAGGTGGACCCCAGAAAATCAAATAACCCCATT-AAAAATGGG  549

seq1  GCTCAGAGCTAAACAAAGAATT  571
      | ||| |||| |||||||||||
seq2  GTTCATAGCTGAACAAAGAATT  571

seq1: chr4_66580495_66580561
seq2: B6Ng01-085I02.g_82_148

seq1  GGAATCTCTACTACCTTGGGAGTTCTTGGGATCTGGAAGCCGGGTGGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCTCTACTACCTTGGGAGTTCTTGGGATCTGGAAGCCGGGTGGGGG  50

seq1  TGGTGGTGGTGGTGGTG  67
      |||||||||||||||||
seq2  TGGTGGTGGTGGTGGTG  67