BAC Information

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BAC

Clone NameB6Ng01-086O20
Chromosome4 (Build37)
Map Location 82,071,717 - 82,072,416
singlet/doubletsinglet
Overlap geneNfib
Upstream geneMpdz, LOC100040131, LOC100040144, EG668895, LOC100040164, EG545641
Downstream geneZdhhc21, Cer1, Frem1, LOC667985, 1810054D07Rik, Snapc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086O20.bB6Ng01-086O20.g
ACCDH900194DH900195
length1,328700
definitionDH900194|Mus musculus domesticus DNA, BAC clone: B6Ng01-086O20, 5' end.DH900195|Mus musculus domesticus DNA, BAC clone: B6Ng01-086O20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctattagagagctttgcatctggagttttataatggtgccttcgg
gcaaaaaaaattaaaatgaaaccaacaaccaacaacgccctcccccacca
acccacagtttctgctttcccgacagcaagatttctgacttggttaaata
gaattcattaataagcagagggaaaaccactccaggcagtttactcttga
acatgtaagctgttaaaacattttgtggttacaagcgttctgaaaaatcg
tgcgctttctccagcgttttgtgatttcttggagtctctgcatattctga
tgcaggacgtgttcaaatctgagtcagtccacttttctgcggtgcttgtg
atagaggcttgcgtggaagtgtgacactcaaagccaccatgtgtttgggc
ttctcccgctttcagttgcctgatttttccttctgaaaatacagcttatt
ctctaaggcatgtgctgtgtacatgaaatccttcgtcccttcataggtat
ctgattgtctaattttagcttttctctctctctctctctctctctctctc
tctctctctctgtctctctctgtgtggcacttcgagtgtgtgtgtatata
caaaaaaaacacgcatacacacacacgctctgtgtgtccatgagcatcca
tggatggggggaggggtatacatgttttttttagaatgccgcggggcccc
tctcaagagggggaccgatctaaaccttttttatcatgggggggagcccc
acccgggccttccaccttaaaaacgaacaaaacaaacagactcagacccc
ccgaatggatagtattcgtctcagaacagtgaggatctgtctgtaaaaaa
ccaaagaaaacacaccaagaggcaaaggggagagagagaaatataaaaag
gcgctttgggaactaaactatataaatatacgaaaaacccgtcaaagggg
tgtcggtctaacaggagtctctaggaagaaagatcttagggatggggggg
ggccttctgttctcctcttttttcctagtaaaaaagagcaaaattgagtt
ctctctcggggcttatgggattatattgtcgacgtcagagcggggttgtg
ggaaggagacgacaggataggtggtatcaatttcctccccccctacctaa
tcctgacggacgagaggagtgagattggtgaaggttggttaggttctgtt
ttttctttttatgttgcgggggtgagccaagtctctttttgtttttgcat
cgcctgcctatccccgttcgtattggaattgatgaatgatgtgattgttt
gactcgcttgccacccatccgacgggca
gaattctgactgtaaagaagtggggcttaagaagaattggagcaagcgtg
agaccaggtatttacagggtaggtttatacactcttcagcttccaatgga
acaccaaaaggctgtaactctgagatgatcacacctggttctacagtatg
aaaggaaggaagctgcagtagagtcttcactgagatagtgtacaaaagcc
actggagtctactgttgttgttgcactaaatggtcatgttgccaaactgc
ctttgaaattcttacgatttttcccatagaacgagccactcttcactttt
ccagtgggtgtcagttaaagcagagattcataactggctgtgttgaaaat
acgttactatgggtgctcaggctcacatcatctatctatagaaccccgtt
cctcaccgacaccgagggaacatcccagaagagggaacaaaaagaatgtc
agagccggaggatgaagagtgctaggacctttggacatgacatggctgct
tgcaaccatgaagacacagcagttgattacctcagtgacttctgagcaag
accaaactactccaaattccagcacgggtgggggcagggggaatctgaca
agaccccacccttagtcaggaagttgatgagtaattttccttttaagata
ggactactaggtttctacaggaagtgatccatgtccgcttgcataaaggc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_82071717_82072416
seq2: B6Ng01-086O20.g_69_768

seq1  GAATTCTGACTGTAAAGAAGTGGGGCTTAAGAAGAATTGGAGCAAGCGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACTGTAAAGAAGTGGGGCTTAAGAAGAATTGGAGCAAGCGTG  50

seq1  AGACCAGGTATTTACAGGGTAGGTTTATACACTCTTCAGCTTCCAATGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGGTATTTACAGGGTAGGTTTATACACTCTTCAGCTTCCAATGGA  100

seq1  ACACCAAAAGGCTGTAACTCTGAGATGATCACACCTGGTTCTACAGTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAAAAGGCTGTAACTCTGAGATGATCACACCTGGTTCTACAGTATG  150

seq1  AAAGGAAGGAAGCTGCAGTAGAGTCTTCACTGAGATAGTGTACAAAAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGGAAGCTGCAGTAGAGTCTTCACTGAGATAGTGTACAAAAGCC  200

seq1  ACTGGAGTCTACTGTTGTTGTTGCACTAAATGGTCATGTTGCCAAACTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGTCTACTGTTGTTGTTGCACTAAATGGTCATGTTGCCAAACTGC  250

seq1  CTTTGAAATTCTTACGATTTTTCCCATAGAACGAGCCACTCTTCACTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAATTCTTACGATTTTTCCCATAGAACGAGCCACTCTTCACTTTT  300

seq1  CCAGTGGGTGTCAGTTAAAGCAGAGATTCATAACTGGCTGTGTTGAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGGTGTCAGTTAAAGCAGAGATTCATAACTGGCTGTGTTGAAAAT  350

seq1  ACGTTACTATGGGTGCTCAGGCTCACATCATCTATCTATAGAACCCCGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTACTATGGGTGCTCAGGCTCACATCATCTATCTATAGAACCCCGTT  400

seq1  CCTCACCGACACCGAGGGAACATCCCAGAAGAGGGAACAAAAAGAATGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCGACACCGAGGGAACATCCCAGAAGAGGGAACAAAAAGAATGTC  450

seq1  AGAGCCGGAGGATGAAGAGTGCTAGGACCTTTGGACATGACATGGCTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCGGAGGATGAAGAGTGCTAGGACCTTTGGACATGACATGGCTGCT  500

seq1  TGCAACCATGAAGACACAGCAGTTGATTACCTCAGTGACTTCTGAGCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACCATGAAGACACAGCAGTTGATTACCTCAGTGACTTCTGAGCAAG  550

seq1  ACCAAACTACTCCAAATTCCAGCACGGGTGGGGGCAGGGGGAATCTGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACTACTCCAAATTCCAGCACGGGTGGGGGCAGGGGGAATCTGACA  600

seq1  AGACCCCACCCTTAGTCAGGAAGTTGATGAGTAATTTTCCTTTTAAGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCCACCCTTAGTCAGGAAGTTGATGAGTAATTTTCCTTTTAAGATA  650

seq1  GGACTACTAGGTTTCTACAGGAAGTGATCCATGTCCGCTTGCATAAAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTACTAGGTTTCTACAGGAAGTGATCCATGTCCGCTTGCATAAAGGC  700