BAC Information

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BAC

Clone NameB6Ng01-086P21
Chromosome4 (Build37)
Map Location 97,168,196 - 97,169,301
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665095, Cyp2j6, Cyp2j9, Cyp2j5, LOC100039415, LOC620779
Downstream geneLOC620883, EG638698, Nfia, LOC100039459, LOC669426, LOC384106, 0610025J13Rik, Tm2d1, Inadl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086P21.bB6Ng01-086P21.g
ACCDH900244DH900245
length1,1971,108
definitionDH900244|Mus musculus domesticus DNA, BAC clone: B6Ng01-086P21, 5' end.DH900245|Mus musculus domesticus DNA, BAC clone: B6Ng01-086P21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatgaaaatgatgacacagcatacccaaacttttggaacacaat
gaaagcagtgctaagaggaaaatttatagcactaaatgtccttgtaaagt
aatttgagagatagtgacactaaatccttggtgttgttcctgtcaataaa
agtgcaatacagagcatgagaaaaccccaaaatgttgacttcctgaaaaa
catctgattacactcttcaaaactgtcatttgccaaagcaagtaaaattc
tgtcatagtagagaggagataaacaaacattaaacctatatatagttggc
cattatggaatagtggaaggaaaatctgaaagatattaatgagatgtaaa
aagatatgtggagtgaaattagcagcaccaagtccttggagttcatcatg
tgtggcaaatacagcatgctcatgtctagtactgactgtaggatgcagtg
tacatggagactgtatgatgtctacgtaatttctgtacctattcaacaaa
tagaaccaaaagtttcagaaagaagaaaatgataaattgtaaagtagaac
taaatgaaataaagactaaaatgtaatagaaagagcaacacatggagatg
tgtctgctcctgatctcttctgggttttattttgatggaatatcctattc
catcactttactttcagtccttaaaatgacaaagttggcaaattattagc
tggattctttacatataaatgaaggaaaatccaaatacacaaaacagttt
atggacagggaaagggtgacattacaatcggcaacagaaatacagaagat
tattgcaaattatgtttaacatcaaccagccaataaaatttaaattctag
aaagaaacggaaaaaattctagatacatactacctaaatcaaaccataaa
ggaactgatgactttagggaagcaacagtgagtggagatatcaagttgtt
aataacacattgaggagggagaggcccagcaattcctggcttcactgtag
ggctctactacatatttaaagaggatttaaagatatttttaatgaaaagg
aagaatttattccaacctcatctacttagccataatctgttatacattaa
acccaatgacacaggccttgggccgtgttggccccacggccctcatccca
gcactgggaggacagaagcagttggatattctcgagaatctgaagac
gaattcttgagcactgtccactaatacaacttgaagcgttttagctctca
accccttgtattgtagtgagccatttctcatttacttggagtcattctta
tggctgaatcagttatcccaaagaacatgcttattcaggagaggtagtct
caattaatatctgacctgtggtaaagaataagaaatgagttgtgacctgt
aaaatgacatgccccacttttcttctttaattttctctttcagttattca
tttacatattcagttactgctgacattaggcaacacaatgatgcacagcc
tgatcattgagagcatacagagacccggacacagactcaggagctggcac
tcagttgtatggaacatcaaccacacagacttgccgctgatgaatgatag
gcacaaatctgtcaccagttggcagttcagggggccaagaaggtgacatt
tttatccttctctattaacacttaagactccaaatttggtgagactattg
aggtagatttggtgtgaagattttaaggagtcagaaacagtgcggaaggt
acaaatggaagtgggtgttttcagttcagcattagacttggggttgtgat
ggccatgaaatacctgatgaaaaataatagctgatctaaagaaaattatc
acataattgtaaatattacattattaaaggtgacagagagtgactgagta
gtagaacacaagcatctgtcctgtaccccgccatcccatcatctcgtctc
atctcacctcacttatatctctgtctcttccacgcttctgtttcttcatg
gccagaggcatgtcctgttatgaagagatacacagtgagtatcttcatgt
acctcaaggtgtgtgtacccaggaggagacttagacttatttaagatctg
gctggtctggtcatttgggaagagtgtgcttgggaaaatttcaactttgt
gatgactgttctagagtgcagatgtggcaaaacacaacagtggaactgct
gatagagttactagaccaccacccccttctcttgcctcctcagaggtatg
ttattatgttttcaataatgtagctttctatgagtctgtgggccctaagg
tggaggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_97168196_97169301
seq2: B6Ng01-086P21.g_70_1177 (reverse)

seq1  TACCT-CACCTAAGGGCCCACAGACCTCATAGAAACCCTACATTTATTGA  49
      ||||| ||||| |||||||||||| ||||||||||  ||||| |||||||
seq2  TACCTCCACCTTAGGGCCCACAGA-CTCATAGAAA-GCTACA-TTATTGA  47

seq1  AAACATAAT-ACATACCTCTGAG--AGCCAGAGAAGGGG--TGTGGTCTA  94
      ||||||||| |||||||||||||   || ||||||||||   ||||||||
seq2  AAACATAATAACATACCTCTGAGGAGGCAAGAGAAGGGGGTGGTGGTCTA  97

seq1  GTAACTTCTATCAGCAGTTCCACTGTTGTGTTTTGCCACATCTGCACCTC  144
      ||||| |||||||||||||||||||||||||||||||||||||||| |||
seq2  GTAAC-TCTATCAGCAGTTCCACTGTTGTGTTTTGCCACATCTGCA-CTC  145

seq1  TAAGAACAGTCATCACAAAGTTGACATTTT-CCAAGCACACTCTT-CCAA  192
      | |||||||||||||||||||||| ||||| |||||||||||||| ||||
seq2  T-AGAACAGTCATCACAAAGTTGAAATTTTCCCAAGCACACTCTTCCCAA  194

seq1  ATGACCAGACCAGCCAGATCTTAAATAAGTCTAAGTCTCCTCCTGGGTAC  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCAGACCAGCCAGATCTTAAATAAGTCTAAGTCTCCTCCTGGGTAC  244

seq1  ACACACCTTGAGGTACATGAAGATACTCACTGTGTATCTCTTCATAACAG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCTTGAGGTACATGAAGATACTCACTGTGTATCTCTTCATAACAG  294

seq1  GACATGCCTCTGGCCATGAAGAAACAGAAGCGTGGAAGAGACAGAGATAT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGCCTCTGGCCATGAAGAAACAGAAGCGTGGAAGAGACAGAGATAT  344

seq1  AAGTGAGGTGAGATGAGACGAGATGATGGGATGGCGGGGTACAGGACAGA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGGTGAGATGAGACGAGATGATGGGATGGCGGGGTACAGGACAGA  394

seq1  TGCTTGTGTTCTACTACTCAGTCACTCTCTGTCACCTTTAATAATGTAAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTGTTCTACTACTCAGTCACTCTCTGTCACCTTTAATAATGTAAT  444

seq1  ATTTACAATTATGTGATAATTTTCTTTAGATCAGCTATTATTTTTCATCA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACAATTATGTGATAATTTTCTTTAGATCAGCTATTATTTTTCATCA  494

seq1  GGTATTTCATGGCCATCACAACCCCAAGTCTAATGCTGAACTGAAAACAC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTCATGGCCATCACAACCCCAAGTCTAATGCTGAACTGAAAACAC  544

seq1  CCACTTCCATTTGTACCTTCCGCACTGTTTCTGACTCCTTAAAATCTTCA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTCCATTTGTACCTTCCGCACTGTTTCTGACTCCTTAAAATCTTCA  594

seq1  CACCAAATCTACCTCAATAGTCTCACCAAATTTGGAGTCTTAAGTGTTAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAATCTACCTCAATAGTCTCACCAAATTTGGAGTCTTAAGTGTTAA  644

seq1  TAGAGAAGGATAAAAATGTCACCTTCTTGGCCCCCTGAACTGCCAACTGG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAGGATAAAAATGTCACCTTCTTGGCCCCCTGAACTGCCAACTGG  694

seq1  TGACAGATTTGTGCCTATCATTCATCAGCGGCAAGTCTGTGTGGTTGATG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGATTTGTGCCTATCATTCATCAGCGGCAAGTCTGTGTGGTTGATG  744

seq1  TTCCATACAACTGAGTGCCAGCTCCTGAGTCTGTGTCCGGGTCTCTGTAT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATACAACTGAGTGCCAGCTCCTGAGTCTGTGTCCGGGTCTCTGTAT  794

seq1  GCTCTCAATGATCAGGCTGTGCATCATTGTGTTGCCTAATGTCAGCAGTA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCAATGATCAGGCTGTGCATCATTGTGTTGCCTAATGTCAGCAGTA  844

seq1  ACTGAATATGTAAATGAATAACTGAAAGAGAAAATTAAAGAAGAAAAGTG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATATGTAAATGAATAACTGAAAGAGAAAATTAAAGAAGAAAAGTG  894

seq1  GGGCATGTCATTTTACAGGTCACAACTCATTTCTTATTCTTTACCACAGG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATGTCATTTTACAGGTCACAACTCATTTCTTATTCTTTACCACAGG  944

seq1  TCAGATATTAATTGAGACTACCTCTCCTGAATAAGCATGTTCTTTGGGAT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATATTAATTGAGACTACCTCTCCTGAATAAGCATGTTCTTTGGGAT  994

seq1  AACTGATTCAGCCATAAGAATGACTCCAAGTAAATGAGAAATGGCTCACT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATTCAGCCATAAGAATGACTCCAAGTAAATGAGAAATGGCTCACT  1044

seq1  ACAATACAAGGGGTTGAGAGCTAAAACGCTTCAAGTTGTATTAGTGGACA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATACAAGGGGTTGAGAGCTAAAACGCTTCAAGTTGTATTAGTGGACA  1094

seq1  GTGCTCAAGAATTC  1106
      ||||||||||||||
seq2  GTGCTCAAGAATTC  1108