BAC Information

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BAC

Clone NameB6Ng01-088B12
Chromosome4 (Build37)
Map Location 55,141,688 - 55,142,528
singlet/doubletsinglet
Overlap geneLOC670211
Upstream geneLOC666901, LOC100041303, LOC384018, EG666920, Zfp462
Downstream geneRad23b, LOC666953, LOC100041348, Klf4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088B12.b
ACCDH901044
length923
definitionDH901044|Mus musculus domesticus DNA, BAC clone: B6Ng01-088B12, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggttcccgctgtagaagcaggagcaatgggaagtcctgagat
ctgagagttattagcatgtgttcagcattgtcctggcaccttattacatt
gtcacacttaatcctaccaacgctgtgcagtatgtgtaacagccccatgt
tagaggagcccaaaggtgatgggtacggttatatatatataaccgtatat
atatatgagaagtgatgaccccataaagacaagaagcattctgctaccag
aagaagaacacagttcagtcgtttccattgtctggcatagatccatataa
tttttcttaagactcccactaaatatagcgaaaacatccaacactaagag
cacacttagatatattctagaggggagaacagatgaaatggatgaccttt
gttaaacattcaatacatgccagtcactataattgttctacttgaattga
cttatgcaatcctataagaatgtgatgaattaggagttgctatttattta
tttatttatttatttatttatttatttatttatttatttattgttttttt
tgagacagggtttctctgtgtagccctggctgtcttggaattcactctgt
agaccaggctggcctcgaactcagtctgcctgcctctgccgcccaagtgc
tggaattaaaggtgtgtgctatcactgcccagctttctttctttctttct
ttctttctttctttctttctttctttctttctttctttccttccttcctt
ctttctttctttctttctttctttctttctttctttctttctttcttctt
ctttccttccttctttcttctttctttctttcttcttcttcttcttcttc
ttcttcttcttcttcttcttccttccttcttggagaattgctattttgat
tctattccatctcatgtttatgt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_55141688_55142528
seq2: B6Ng01-088B12.b_46_879

seq1  GAATTCCAGGTTCCCGCTGTAGAAGCAGGAGCAATGGGAAGTCCTGAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTTCCCGCTGTAGAAGCAGGAGCAATGGGAAGTCCTGAGAT  50

seq1  CTGAGAGTTATTAGCATGTGTTCAGCATTGTCCTGGCACCTTATTACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGTTATTAGCATGTGTTCAGCATTGTCCTGGCACCTTATTACATT  100

seq1  GTCACACTTAATCCTACCAACGCTGTGCAGTATGTGTAACAGCCCCATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACACTTAATCCTACCAACGCTGTGCAGTATGTGTAACAGCCCCATGT  150

seq1  TAGAGGAGCCCAAAGGTGATGGGTACGGTTATATATATATAACCGTATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGAGCCCAAAGGTGATGGGTACGGTTATATATATATAACCGTATAT  200

seq1  ATATATGAGAAGTGATGACCCCATAAAGACAAGAAGCATTCTGCTACCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGAGAAGTGATGACCCCATAAAGACAAGAAGCATTCTGCTACCAG  250

seq1  AAGAAGAACACAGTTCAGTCGTTTCCATTGTCTGGCATAGATCCATATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAACACAGTTCAGTCGTTTCCATTGTCTGGCATAGATCCATATAA  300

seq1  TTTTTCTTAAGACTCCCACTAAATATAGCGAAAACATCCAACACTAAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTAAGACTCCCACTAAATATAGCGAAAACATCCAACACTAAGAG  350

seq1  CACACTTAGATATATTCTAGAGGGGAGAACAGATGAAATGGATGACCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTAGATATATTCTAGAGGGGAGAACAGATGAAATGGATGACCTTT  400

seq1  GTTAAACATTCAATACATGCCAGTCACTATAATTGTTCTACTTGAATTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAACATTCAATACATGCCAGTCACTATAATTGTTCTACTTGAATTGA  450

seq1  CTTATGCAATCCTATAAGAATGTGATGAATTAGGAGTTGCTATTTATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGCAATCCTATAAGAATGTGATGAATTAGGAGTTGCTATTTATTTA  500

seq1  TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTGTTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTGTTTTTTT  550

seq1  TGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCTTGGAATTCACTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCTTGGAATTCACTCTGT  600

seq1  AGACCAGGCTGGCCTCGAACTCAGTCTGCCTGCCTCTGCCGCCCAAGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGGCTGGCCTCGAACTCAGTCTGCCTGCCTCTGCCGCCCAAGTGC  650

seq1  TGGAATTAAAGGTGTGTGCTATCACTGCCCAGCTTTCTTTCTTTCTTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTAAAGGTGTGTGCTATCACTGCCCAGCTTTCTTTCTTTCTTTCT  700

seq1  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTT  750

seq1  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  800
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT---  797

seq1  TTCTTTCTTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTT  841
          ||||||||||||||||||| |||||||||||||||||
seq2  ---CTTCTTTCCTTCCTTCTTTC-TTCTTTCTTTCTTTCTT  834