BAC Information

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BAC

Clone NameB6Ng01-088H22
Chromosome4 (Build37)
Map Location 16,374,072 - 16,375,151
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040095, LOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150, LOC383994
Downstream geneLOC100040154, LOC667212, LOC100040173
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088H22.bB6Ng01-088H22.g
ACCDH901330DH901331
length1,0721,070
definitionDH901330|Mus musculus domesticus DNA, BAC clone: B6Ng01-088H22, 5' end.DH901331|Mus musculus domesticus DNA, BAC clone: B6Ng01-088H22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagccttttatcatgaatgggtgttggattttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatactggattatgttgatggatttccgtatattgaacc
atccctgtatccctgggatgaaacctacttggtcaggatggatgattgtt
ttgatgtgttcttggattcagtgagcaagaactttattgagaattttttc
atcgatattcataagggaaattggtctgaagttctccatctttgttgggg
ctttttgtggtttatgtatcagagtaattgtggctttatagaatgagttg
gatagagtaccttatatttctattttgtggaataatttgtgaagaactgg
gattagatcttcttttaaggtctcatagaactctgcactaaacccatctg
gtcctgggctttttttgggagactattaatgactacttctatttttttag
gggatataggactgttgagatcattaacctgatcttgatttagctttggt
acgtagtaactgtctagaaacttgtccatttcatccagggtttccagttt
tgttgagtatagccttttgtagaaggatctgatggtgttatggatttctt
caggatctgttgttatgttttccctttcatttctgattttattaattagg
atgctttccctgtgtcctcttgagtctggctaagggtttatctatcttgt
tgatattctcaaagaaccagctcctcgattgggttggttctttgaatagt
tctttttgttaccactttggttgatttcacccctgagtttgattatttcc
tgcccttctactcctcttgggtgatttttcttcctttttgttctagagct
ttaaggtgtgttgtagcctcctaatgtgtgcactctctagtttcttttgg
aggcactcagagctatgagtttcctctagaatgctttcattgtgtccata
gtttgggtatgttgtgggcttcattttcattaaaacacagaaaagtcctt
aattctttccttttatcctttc
gaattcacttttgccaaataataactacttaaaagcctaatataactaat
taagattttcttggtcaaaatctccatgttacaccatgttatctgaggaa
gttatcccggaatttcttcctccacttctattaatacagcttcagaacct
acttgggatgcataatttatttcagctcaatcttggaaatgtataagcaa
aatataaaacatctaattttgtttgaaacttttcaggggcatgcacattg
tccccatatgcttgactctttgactattaattcatctcagtttcattcac
agaaaagtaaagcattacaagtagctttggagtctttttctttgcatttt
tagatttatttcattagcatctttatgcacaacagtcatttgtttcaatg
tttttcatgcttaaatggaaaagctttcattggaaatgaatttttaaaaa
agtaggttcaatgatctatgtgaaataaatgatctcagtgcttatcttca
tagagaagccactcatgagttatcgttctcatttgtaatgataggtaaca
tagctcaaggatacatcacaaattctctgaaaatgtaccctgtctgtata
aatgcatttacctatatgaaaaaaatgagttactttttaaataaatattt
gaaagtcggtatagtctagaaacaatatagttagagatggtcaaattgtg
atttatgtcccacccaaaatataattcagtcagccagagtgacttaactt
aggaaattccttctctgcttactagtctaattagcatgtttcagtacatc
aagtaacagtttgggatgaagatgacctctgtcagctggtatcctagaag
caaatacttcagatctatggtatcgaaaggaaatggttatatttcattgt
catctcttagaaagcttctttttactgacacttttctcaaaagcacctgg
ctgatgcaattacaagtgagttgtttagacactttgcttcatgataatta
gtatgacccagtctctgctatgcatcaagtgagtactaggatagatctag
tgattgtagaggaatacagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16374072_16375151
seq2: B6Ng01-088H22.g_70_1139

seq1  GAATTCACTTTTGCCAAATAATAACTACTTAAAAGCCTAATATAACTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTTGCCAAATAATAACTACTTAAAAGCCTAATATAACTAAT  50

seq1  TAAGATTTTCTTGGTCAAAATCTCCATGTTACACCATGTTATCTGAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTTTCTTGGTCAAAATCTCCATGTTACACCATGTTATCTGAGGAA  100

seq1  GTTATCCCGGAATTTCTTCCTCCACTTCTATTAATACAGCTTCAGAACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCCCGGAATTTCTTCCTCCACTTCTATTAATACAGCTTCAGAACCT  150

seq1  ACTTGGGATGCATAATTTATTTCAGCTCAATCTTGGAAATGTATAAGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGGATGCATAATTTATTTCAGCTCAATCTTGGAAATGTATAAGCAA  200

seq1  AATATAAAACATCTAATTTTGTTTGAAACTTTTCAGGGGCATGCACATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAAACATCTAATTTTGTTTGAAACTTTTCAGGGGCATGCACATTG  250

seq1  TCCCCATATGCTTGACTCTTTGACTATTAATTCATCTCAGTTTCATTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATATGCTTGACTCTTTGACTATTAATTCATCTCAGTTTCATTCAC  300

seq1  AGAAAAGTAAAGCATTACAAGTAGCTTTGGAGTCTTTTTCTTTGCATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTAAAGCATTACAAGTAGCTTTGGAGTCTTTTTCTTTGCATTTT  350

seq1  TAGATTTATTTCATTAGCATCTTTATGCACAACAGTCATTTGTTTCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTATTTCATTAGCATCTTTATGCACAACAGTCATTTGTTTCAATG  400

seq1  TTTTTCATGCTTAAATGGAAAAGCTTTCATTGGAAATGAATTTTTAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATGCTTAAATGGAAAAGCTTTCATTGGAAATGAATTTTTAAAAA  450

seq1  AGTAGGTTCAATGATCTATGTGAAATAAATGATCTCAGTGCTTATCTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGTTCAATGATCTATGTGAAATAAATGATCTCAGTGCTTATCTTCA  500

seq1  TAGAGAAGCCACTCATGAGTTATCGTTCTCATTTGTAATGATAGGTAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAGCCACTCATGAGTTATCGTTCTCATTTGTAATGATAGGTAACA  550

seq1  TAGCTCAAGGATACATCACAAATTCTCTGAAAATGTACCCTGTCTGTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCAAGGATACATCACAAATTCTCTGAAAATGTACCCTGTCTGTATA  600

seq1  AATGCATTTACCTATATGAAAAAAATGAGTTACTTTTTAAATAAATATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATTTACCTATATGAAAAAAATGAGTTACTTTTTAAATAAATATTT  650

seq1  GAAAGTCGGTATAGTCTAGAAACAATATAGTTAGAGATGGTCAAATTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTCGGTATAGTCTAGAAACAATATAGTTAGAGATGGTCAAATTGTG  700

seq1  ATTTATGTCCCACCCAAAATATAATTCAGTCAGCCAGAGTGACTTAACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGTCCCACCCAAAATATAATTCAGTCAGCCAGAGTGACTTAACTT  750

seq1  AGGAAATTCCTTCTCTGCTTACTAGTCTAATTAGCATGTTTCAGTACATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATTCCTTCTCTGCTTACTAGTCTAATTAGCATGTTTCAGTACATC  800

seq1  AAGTAACAGTTTGGGATGAAGATGACCTCTGTCAGCTGGTATCCTAGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAACAGTTTGGGATGAAGATGACCTCTGTCAGCTGGTATCCTAGAAG  850

seq1  CAAATACTTCAGATCTATGGTATCGAAAGGAAATGGTTATATTTCATTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACTTCAGATCTATGGTATCGAAAGGAAATGGTTATATTTCATTGT  900

seq1  CATCTCTTAGAAAGCTTCTTTTTACTGACACTTTTCTCAAAAGCACCTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTTAGAAAGCTTCTTTTTACTGACACTTTTCTCAAAAGCACCTGG  950

seq1  CTGATGCAATTACAAGGTGAGTTGTTTAGGAACACTTTGCTTCATGATAA  1000
      ||||||||||||||| |||||||||||||  ||||||||||||||||| |
seq2  CTGATGCAATTACAA-GTGAGTTGTTTAG--ACACTTTGCTTCATGAT-A  996

seq1  ATTAGTATGACCCAGTCTCTGCTATGCATTCAAAGTGAGTACTAAGGAAT  1050
      |||||||||||||||||||||||||||||   ||||||||||||  | ||
seq2  ATTAGTATGACCCAGTCTCTGCTATGCAT--CAAGTGAGTACTA--GGAT  1042

seq1  AGATCTAGTGATTTGTTAGAGGATTACAGC  1080
      |||||||||||||   ||||||| ||||||
seq2  AGATCTAGTGATT--GTAGAGGAATACAGC  1070