BAC Information

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BAC

Clone NameB6Ng01-091E04
Chromosome4 (Build37)
Map Location 83,672,025 - 83,804,770
singlet/doubletdoublet
Overlap geneLOC668010
Upstream geneLOC667985, 1810054D07Rik, Snapc3, Psip1, LOC100040611, 4930473A06Rik
Downstream geneBnc2, LOC100040660, LOC624465, LOC100040284, D530005L17Rik, LOC622811
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091E04.bB6Ng01-091E04.g
ACCDH903337DH903338
length1,0971,156
definitionDH903337|Mus musculus domesticus DNA, BAC clone: B6Ng01-091E04, 5' end.DH903338|Mus musculus domesticus DNA, BAC clone: B6Ng01-091E04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,803,661 - 83,804,770)(83,672,025 - 83,673,201)
sequence
gaattcaatgccagcatggacagttcagtgggctttatatatatttttaa
ttaaaaaataaaataagaaaggaaaaataattggtgtttacactaggata
tttggtcatgtccccaccccctaatacatgacatctgaacacagctcctt
gtagcagtttggcattgtgagtgtagcaggccatgcctggtccagtgttc
cagtttaggcagctacaggggagcattggagctgacagtctgctctttgc
aacctctacatgattcagctccagctaagcttgtggcctccacccacttc
atgattggtgcctcacatggattcagaggcagcaaatcccccacagctcc
tgggcccttctgctcagtgggctataaaacactattactctcagcaagcc
tggtcatcagtaataatgagacggctttgaaattgccactatgaaaccct
aaaccaggcacagacctgaatgttgggccaagcacttgggaaaggttggc
caaggttcgcacacactagcttgggtttgaaggcagcttttctcagcctg
ggtttctttagggcctgggtctgtttcatcagatgctgggctgggtggtt
gtgaatggactgatttactgggcttgggaaaaaaatgcacaaagcctggg
gctgggagtagtttttgctttgaggttttgggggaagtgattgaagctgg
agttttgcctttggagggaattctggtcctcccattccaaccacattccc
ataagtcttatatatttctctcacccataccccaaccttccaggacacaa
ggcgtgagtgaagggagctatgttgaacagattggcttttcaataaattg
ttaacatattttttatatgtgatttggatctggaacttcagacggggctg
ggtttctcttaatagattgttaaagtcagctcgcaatggtccagcacagc
actacttactttgaacaaatttgataataatatctgggttgcctgtgggc
atcagaagatttgcccatggttagcctatattgcccagcactaggtggtc
tcacagatgactgccagaatgggaaataatgttccattacatacatc
gaattcttgatgaggaataatcccagtactgagatcacacaattaactct
tcaaaataagattaagaactctgcattctggaagagagaccctgtctggt
gattagttgcctggaagagcttgttacaagccgaatagaaggaactgtca
tcctgttgacggtttccagggaccaaggctccaggacctgcagtaatttc
atttgtcatcattgcaaaaccagatggtcacgtgagctgccaaagcctgc
atccgaggaggttcacttgccaactgtccttagtaatcagaactcgaggt
agacaaggcagctgtttagacagaattatttctaacggttacattatcat
cgtggaaaaaaatggaggcaacgcagtgggaaaaacttgtactaaattcc
aaactctaggcaaaacctgtagcaatgaggaaacctctagaaattgtgat
gataaccatggccacagccatggccattgtaaggatgctccaaaagagtt
ttcaacagacagggtagcaacactgtgccatgaggagagagaagtgtgac
cctgggtgtcatgtgtgagctgagggatgtgcatagagaggtggctattc
aatcaaggacatggtgtcctaagggcatgatattgagtctcgaaagggca
ccagaacacgtgggagaatcataggcaaaaaggtttgttcttaactttag
tcagtctattagcccatgggtctcggacaattctcagccaacaactccta
acataggtacctgcatgttagcaaatagctcagctcatcaatgtcattca
gggagcacaggcagatatgacagtcaccactttaatgattaccaggtacc
ctccctgaatgaagagaactttttagatcttacttcagcaattacatgtt
ttatctaacaaatgacctgcataaattccattcactggccattccataag
ggagccagtgacgtcgatcttaccagttggtaggaagaaaggagatgtag
cggagatgcatggtgatagtattaatggctgaacgctctgtctgccctat
gggatcaggccctacagacattatcagctgggaggaattctagtagtaag
gaataaccggagatagagacctggggagctgtggggcaaagtctaaattg
aggctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_83803661_83804770
seq2: B6Ng01-091E04.b_44_1140 (reverse)

seq1  GATGTAATGTAAAGGGAACATTATATTCCCATTTCTGTGCAGTTCATCTG  50
      ||||| |||| || |||||||||| |||||| ||||| |||| |||||||
seq2  GATGT-ATGT-AATGGAACATTAT-TTCCCA-TTCTG-GCAG-TCATCTG  44

seq1  TGAGACCACCCTAGTGCTTGGGCATATAGGCTAACCATGGGCAAATCTTT  100
      |||||||| ||||||||| ||  |||||||||||||||||||||||||| 
seq2  TGAGACCA-CCTAGTGCTGGGCAATATAGGCTAACCATGGGCAAATCTT-  92

seq1  CTTGATGCCCACAGGCAACCCAGATATTATTTATCAAATTTTGTTCAAAG  150
        ||||||||||||||||||||||||||| |||||||| |||||||||||
seq2  -CTGATGCCCACAGGCAACCCAGATATTA-TTATCAAA-TTTGTTCAAAG  139

seq1  TAAGTAGTGCTGTGCTGGACCATTGCGAGCCTGACTTTAACAATCTTATT  200
      ||||||||||||||||||||||||||||| ||||||||||||||| ||||
seq2  TAAGTAGTGCTGTGCTGGACCATTGCGAG-CTGACTTTAACAATC-TATT  187

seq1  AAGAGAAACCCAGCCCCGTCTGAAGTTCCAGATCCAAATCACATATAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAACCCAGCCCCGTCTGAAGTTCCAGATCCAAATCACATATAAAA  237

seq1  AATATGTTAACAATTTATTGAAAAGCCAATCTGTTCAACATAGCTCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTTAACAATTTATTGAAAAGCCAATCTGTTCAACATAGCTCCCTT  287

seq1  CACTCACGCCTTGTGTCCTGGAAGGTTGGGGTATGGGTGAGAGAAATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCACGCCTTGTGTCCTGGAAGGTTGGGGTATGGGTGAGAGAAATATA  337

seq1  TAAGACTTATGGGAATGTGGTTGGAATGGGAGGACCAGAATTCCCTCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACTTATGGGAATGTGGTTGGAATGGGAGGACCAGAATTCCCTCCAA  387

seq1  AGGCAAAACTCCAGCTTCAATCACTTCCCCCAAAACCTCAAAGCAAAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAACTCCAGCTTCAATCACTTCCCCCAAAACCTCAAAGCAAAAAC  437

seq1  TACTCCCAGCCCCAGGCTTTGTGCATTTTTTTCCCAAGCCCAGTAAATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCCAGCCCCAGGCTTTGTGCATTTTTTTCCCAAGCCCAGTAAATCA  487

seq1  GTCCATTCACAACCACCCAGCCCAGCATCTGATGAAACAGACCCAGGCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTCACAACCACCCAGCCCAGCATCTGATGAAACAGACCCAGGCCC  537

seq1  TAAAGAAACCCAGGCTGAGAAAAGCTGCCTTCAAACCCAAGCTAGTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAACCCAGGCTGAGAAAAGCTGCCTTCAAACCCAAGCTAGTGTGT  587

seq1  GCGAACCTTGGCCAACCTTTCCCAAGTGCTTGGCCCAACATTCAGGTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAACCTTGGCCAACCTTTCCCAAGTGCTTGGCCCAACATTCAGGTCTG  637

seq1  TGCCTGGTTTAGGGTTTCATAGTGGCAATTTCAAAGCCGTCTCATTATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGTTTAGGGTTTCATAGTGGCAATTTCAAAGCCGTCTCATTATTA  687

seq1  CTGATGACCAGGCTTGCTGAGAGTAATAGTGTTTTATAGCCCACTGAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGACCAGGCTTGCTGAGAGTAATAGTGTTTTATAGCCCACTGAGCA  737

seq1  GAAGGGCCCAGGAGCTGTGGGGGATTTGCTGCCTCTGAATCCATGTGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGCCCAGGAGCTGTGGGGGATTTGCTGCCTCTGAATCCATGTGAGG  787

seq1  CACCAATCATGAAGTGGGTGGAGGCCACAAGCTTAGCTGGAGCTGAATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAATCATGAAGTGGGTGGAGGCCACAAGCTTAGCTGGAGCTGAATCA  837

seq1  TGTAGAGGTTGCAAAGAGCAGACTGTCAGCTCCAATGCTCCCCTGTAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAGGTTGCAAAGAGCAGACTGTCAGCTCCAATGCTCCCCTGTAGCT  887

seq1  GCCTAAACTGGAACACTGGACCAGGCATGGCCTGCTACACTCACAATGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAAACTGGAACACTGGACCAGGCATGGCCTGCTACACTCACAATGCC  937

seq1  AAACTGCTACAAGGAGCTGTGTTCAGATGTCATGTATTAGGGGGTGGGGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCTACAAGGAGCTGTGTTCAGATGTCATGTATTAGGGGGTGGGGA  987

seq1  CATGACCAAATATCCTAGTGTAAACACCAATTATTTTTCCTTTCTTATTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCAAATATCCTAGTGTAAACACCAATTATTTTTCCTTTCTTATTT  1037

seq1  TATTTTTTAATTAAAAATATATATAAAGCCCACTGAACTGTCCATGCTGG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTAATTAAAAATATATATAAAGCCCACTGAACTGTCCATGCTGG  1087

seq1  CATTGAATTC  1110
      ||||||||||
seq2  CATTGAATTC  1097

seq1: chr4_83672025_83673201
seq2: B6Ng01-091E04.g_68_1223

seq1  GAATTCTTGATGAGGAATAATCCCAGTACTGAGATCACACAATTAACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGATGAGGAATAATCCCAGTACTGAGATCACACAATTAACTCT  50

seq1  TCAAAATAAGATTAAGAACTCTGCATTCTGGAAGAGAGACCCTGTCTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATAAGATTAAGAACTCTGCATTCTGGAAGAGAGACCCTGTCTGGT  100

seq1  GATTAGTTGCCTGGAAGAGCTTGTTACAAGCCGAATAGAAGGAACTGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGTTGCCTGGAAGAGCTTGTTACAAGCCGAATAGAAGGAACTGTCA  150

seq1  TCCTGTTGACGGTTTCCAGGGACCAAGGCTCCAGGACCTGCAGTAATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTGACGGTTTCCAGGGACCAAGGCTCCAGGACCTGCAGTAATTTC  200

seq1  ATTTGTCATCATTGCAAAACCAGATGGTCACGTGAGCTGCCAAAGCCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCATCATTGCAAAACCAGATGGTCACGTGAGCTGCCAAAGCCTGC  250

seq1  ATCCGAGGAGGTTCACTTGCCAACTGTCCTTAGTAATCAGAACTCGAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGAGGAGGTTCACTTGCCAACTGTCCTTAGTAATCAGAACTCGAGGT  300

seq1  AGACAAGGCAGCTGTTTAGACAGAATTATTTCTAACGGTTACATTATCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGGCAGCTGTTTAGACAGAATTATTTCTAACGGTTACATTATCAT  350

seq1  CGTGGAAAAAAATGGAGGCAACGCAGTGGGAAAAACTTGTACTAAATTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGAAAAAAATGGAGGCAACGCAGTGGGAAAAACTTGTACTAAATTCC  400

seq1  AAACTCTAGGCAAAACCTGTAGCAATGAGGAAACCTCTAGAAATTGTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTAGGCAAAACCTGTAGCAATGAGGAAACCTCTAGAAATTGTGAT  450

seq1  GATAACCATGGCCACAGCCATGGCCATTGTAAGGATGCTCCAAAAGAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACCATGGCCACAGCCATGGCCATTGTAAGGATGCTCCAAAAGAGTT  500

seq1  TTCAACAGACAGGGTAGCAACACTGTGCCATGAGGAGAGAGAAGTGTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACAGACAGGGTAGCAACACTGTGCCATGAGGAGAGAGAAGTGTGAC  550

seq1  CCTGGGTGTCATGTGTGAGCTGAGGGATGTGCATAGAGAGGTGGCTATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTGTCATGTGTGAGCTGAGGGATGTGCATAGAGAGGTGGCTATTC  600

seq1  AATCAAGGACATGGTGTCCTAAGGGCATGATATTGAGTCTCGAAAGGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGGACATGGTGTCCTAAGGGCATGATATTGAGTCTCGAAAGGGCA  650

seq1  CCAGAACACGTGGGAGAATCATAGGCAAAAAGGTTTGTTCTTAACTTTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACACGTGGGAGAATCATAGGCAAAAAGGTTTGTTCTTAACTTTAG  700

seq1  TCAGTCTATTAGCCCATGGGTCTCGGACAATTCTCAGCCAACAACTCCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTATTAGCCCATGGGTCTCGGACAATTCTCAGCCAACAACTCCTA  750

seq1  ACATAGGTACCTGCATGTTAGCAAATAGCTCAGCTCATCAATGTCATTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGTACCTGCATGTTAGCAAATAGCTCAGCTCATCAATGTCATTCA  800

seq1  GGGAGCACAGGCAGATATGACAGTCACCACTTCAATGATTACCAGGTACC  850
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGGAGCACAGGCAGATATGACAGTCACCACTTTAATGATTACCAGGTACC  850

seq1  CTCCCTGAATGAAGAGAACTTTTTAGATCTTACTTCAGCAATTACATGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGAATGAAGAGAACTTTTTAGATCTTACTTCAGCAATTACATGTT  900

seq1  TTATCTAACAAATGACCTGCATAAATTCCATTCACTGGCCATTCCATAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTAACAAATGACCTGCATAAATTCCATTCACTGGCCATTCCATAAG  950

seq1  GGAGCCAGTGACGTCGATCTTACCAGGTGGGTAGGAAGAAAGGAGATGTA  1000
      ||||||||||||||||||||||||| || |||||||||||||||||||||
seq2  GGAGCCAGTGACGTCGATCTTACCA-GTTGGTAGGAAGAAAGGAGATGTA  999

seq1  GCCGGAGATGCATGGTGATTAGTATTAATGGCTGGAACCGCTCTTGTCTG  1050
      | |||||||||||||||| |||||||||||||||  | ||||| ||||||
seq2  G-CGGAGATGCATGGTGA-TAGTATTAATGGCTG--AACGCTC-TGTCTG  1044

seq1  CCCTATGGGAATTCAAGGCCCTAACAAGAACATTATCCAAGCTGGAGTGG  1100
      ||||||||||  || ||||||| |||   ||||||||  |||||| | ||
seq2  CCCTATGGGA--TC-AGGCCCT-ACA--GACATTATC--AGCTGG-GAGG  1085

seq1  AAATCTAGGGTAGTAAAGGAAATAACCCGGAGGATGAGAACCTGGGAGCT  1150
      || ||||  |||||||  | ||||| ||||||   |||| |  |||||||
seq2  AATTCTA--GTAGTAA--GGAATAA-CCGGAGATAGAGACCTGGGGAGCT  1130

seq1  GT-GGGCAAAGTCTAAAATTTGAGGCTC  1177
      || ||||||||||||||  |||||||||
seq2  GTGGGGCAAAGTCTAAA--TTGAGGCTC  1156