BAC Information

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BAC

Clone NameB6Ng01-091F17
Chromosome4 (Build37)
Map Location 45,790,206 - 45,954,514
singlet/doubletdoublet
Overlap geneLOC100040580, Aldh1b1, Igfbpl1, 1300002K09Rik
Upstream geneZcchc7, D4Wsu132e, Grhpr, Zbtb5, 1700055D18Rik, Polr1e, Fbxo10, 1110019J04Rik, Frmpd1, Rg9mtd3, Exosc3, LOC666325, Wdr32, Mcart1, Shb, LOC100040140, LOC100040557, Gm829, LOC100040567
Downstream geneTdrd7, Tmod1, BC057893, AU014645, Xpa, LOC624430, LOC666379, LOC666389, Foxe1, 5830415F09Rik, Hemgn, LOC100040643, Anp32b, Nans, Trim14, Coro2a, Tbc1d2, Gabbr2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091F17.bB6Ng01-091F17.g
ACCDH903402DH903403
length1,142697
definitionDH903402|Mus musculus domesticus DNA, BAC clone: B6Ng01-091F17, 5' end.DH903403|Mus musculus domesticus DNA, BAC clone: B6Ng01-091F17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,790,206 - 45,791,367)(45,953,821 - 45,954,514)
sequence
gaattcagagatccccctgcctctgcctcccgagtgctaagattagaggt
gtgtgtcaccactaccactggaggctttttcctaattgagattccctctt
ccaagatgactttagcttgtgtcaagttgatagaaaactatccagcacac
ctttcttctgaaattgcctctcctcaagcctgctagccacactgtcaaag
agagacccatggcagccatgccctccccaaaccactgtctctagtacaat
gagggcctctgctgggcctggctccctacaggtagaccttgggcttctca
tgacctttctgattcactcttcatcctggggcagagatagtgacaaagac
tcctgtcctctgacacgaggcacttcctgtgggaggctcttccccctacc
cccaaaccagggatctggtttacaaagatgtctgttataggcagtgtata
accctaccccaacctatcctgcattgggagtccaaggctcaatacaacct
atggggcccagtgtaacatggaaatatgggacaaccaaaaaaaggaggaa
aatgtgctgttcaagcataagatgtaaaattgtccctgtaaaatatttca
ttttcgaccagcaagatggcttacgacccgagttcaatctctaagaagga
gagaacaacctcctatgagctgttctctgacctccattccagtctgcttc
cagctcgtctgcctgcctgcctgcctgcctgcctgccgacctgcctatct
atctatctatctatctatctatctatctatctatctatctatctatctat
ctatctatctatctacctatctatctatctatccatccatccatctatcc
tatctatctctttccttcatacccacctagtccttactctatacctaacc
tctgtggttctatgaactgcttatcaaatgcctcattatcatctgaacag
tcatccagacaaaatctagatggagacatgctgcagctagctgacgtcac
aaatcaattggctagcagaaagttatagcatttcatcagacatgaaggaa
tatatatgcttcttctcagcagtttatagcactttctcacctgacattta
cttgaacaaaacaagtctggacgatcaggaacgatgactgac
gaattcctgaatgagtggatagcaaacccctacctaactctagagacccg
agtccatagcgtttcaaactggaacaacgctgtgtgttcactagaaagca
acaggatgtgaccacaaagacagatgagccctgcctggcagaacccagcc
cgtgggggcccttgggggcaaggttgggtttgttcctcttggcatattct
ttaactgacacacaaactttgtccaagaatgtttgctggcagcttaagta
aatgaataaatgccacactgatgaacgatgtttagtgtgcaagagggaaa
gttaagctgggcagtggtggcgcatgcctttaatcccagcacttgggagg
cagaggcaggcagatttctgagttcaaggccagcctggtctacaaagtga
gttccaggacagccagggctacgcagagaaaccctgtctcgaaaaaacca
aaataaataaataaataaataaatagacaaacaaacaaaccaagaggaga
aaaagttaaaaacaaaacaaaaataacaaatcaaacagacaacaggttca
aggtcctgaactggaatcgtagagtggcctgctcaacagactgcatgggg
gtaggggtggagagggctggagggggctttccaggataggccatgttttg
agggcagtggcttctcttcttcaccacgaccatcaggtgcccattgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_45790206_45791367
seq2: B6Ng01-091F17.b_47_1188

seq1  GAATTCAGAGATCCCCCTGCCTCTGCCTCCCGAGTGCTAAGATTAGAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGATCCCCCTGCCTCTGCCTCCCGAGTGCTAAGATTAGAGGT  50

seq1  GTGTGTCACCACTACCACTGGAGGCTTTTTCCTAATTGAGATTCCCTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCACCACTACCACTGGAGGCTTTTTCCTAATTGAGATTCCCTCTT  100

seq1  CCAAGATGACTTTAGCTTGTGTCAAGTTGATAGAAAACTATCCAGCACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATGACTTTAGCTTGTGTCAAGTTGATAGAAAACTATCCAGCACAC  150

seq1  CTTTCTTCTGAAATTGCCTCTCCTCAAGCCTGCTAGCCACACTGTCAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCTGAAATTGCCTCTCCTCAAGCCTGCTAGCCACACTGTCAAAG  200

seq1  AGAGACCCATGGCAGCCATGCCCTCCCCAAACCACTGTCTCTAGTACAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACCCATGGCAGCCATGCCCTCCCCAAACCACTGTCTCTAGTACAAT  250

seq1  GAGGGCCTCTGCTGGGCCTGGCTCCCTACAGGTAGACCTTGGGCTTCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCCTCTGCTGGGCCTGGCTCCCTACAGGTAGACCTTGGGCTTCTCA  300

seq1  TGACCTTTCTGATTCACTCTTCATCCTGGGGCAGAGATAGTGACAAAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTTCTGATTCACTCTTCATCCTGGGGCAGAGATAGTGACAAAGAC  350

seq1  TCCTGTCCTCTGACACGAGGCACTTCCTGTGGGAGGCTCTTCCCCCTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCCTCTGACACGAGGCACTTCCTGTGGGAGGCTCTTCCCCCTACC  400

seq1  CCCAAACCAGGGATCTGGTTTACAAAGATGTCTGTTATAGGCAGTGTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACCAGGGATCTGGTTTACAAAGATGTCTGTTATAGGCAGTGTATA  450

seq1  ACCCTACCCCAACCTATCCTGCATTGGGAGTCCAAGGCTCAATACAACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTACCCCAACCTATCCTGCATTGGGAGTCCAAGGCTCAATACAACCT  500

seq1  ATGGGGCCCAGTGTAACATGGAAATATGGGACAACCAAAAAAAGGAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGCCCAGTGTAACATGGAAATATGGGACAACCAAAAAAAGGAGGAA  550

seq1  AATGTGCTGTTCAAGCATAAGATGTAAAATTGTCCCTGTAAAATATTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGCTGTTCAAGCATAAGATGTAAAATTGTCCCTGTAAAATATTTCA  600

seq1  TTTTCGACCAGCAAGATGGCTTACGACCCGAGTTCAATCTCTAAGAAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCGACCAGCAAGATGGCTTACGACCCGAGTTCAATCTCTAAGAAGGA  650

seq1  GAGAACAACCTCCTATGAGCTGTTCTCTGACCTCCATTCCAGTCTGCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAACCTCCTATGAGCTGTTCTCTGACCTCCATTCCAGTCTGCTTC  700

seq1  CAGCTCGTCTGCCTGCCTGCCTGCCTGCCTGCCTGCCGACCTGC----CT  746
      ||||||||||||||||||||||||||||||||||||||||||||    ||
seq2  CAGCTCGTCTGCCTGCCTGCCTGCCTGCCTGCCTGCCGACCTGCCTATCT  750

seq1  ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT  800

seq1  CTATCTATCTATCTACCTATCTATCTATCTATCCATCCATCCATCTATCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTATCTATCTACCTATCTATCTATCTATCCATCCATCCATCTATCC  850

seq1  TATCTATCTCTTTCCTTCATACCCACCTAGTCCCTTACTCTATACCTAAC  896
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TATCTATCTCTTTCCTTCATACCCACCTAGT-CCTTACTCTATACCTAAC  899

seq1  CTCTGTGGTTCTATGAACTGCTTATCAAAATGCCCCATTATCATCCTGAA  946
      |||||||||||||||||||||||||| ||||||| ||||||||| ||| |
seq2  CTCTGTGGTTCTATGAACTGCTTATC-AAATGCCTCATTATCAT-CTG-A  946

seq1  ACAGTCCATCCAGACAAAAATCTAGATGGAGACATGCTGCAGCTAGCTGA  996
      ||||| ||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACAGT-CATCCAGAC-AAAATCTAGATGGAGACATGCTGCAGCTAGCTGA  994

seq1  CGTCACAAATCAATTGGGCCTAGCAGATAGTTATAAAGCATTTCATCCAG  1046
      |||||||||||||||||  |||||||| ||||||  |||||||||| |||
seq2  CGTCACAAATCAATTGG--CTAGCAGAAAGTTAT--AGCATTTCAT-CAG  1039

seq1  ACATGAAAGAATATATATGCCTTCTGCTCAGCAGTTTATAGCACTTTCTC  1096
      ||||||| ||||||||||| ||||| ||||||||||||||||||||||||
seq2  ACATGAAGGAATATATATG-CTTCTTCTCAGCAGTTTATAGCACTTTCTC  1088

seq1  CAAACTGACCATGTACTTGGACACAAAACAAGTCTGAGCCGATACAGGAA  1146
        | |||| ||| ||||||   |||||||||||||| | |||| ||||| 
seq2  --ACCTGA-CATTTACTTG--AACAAAACAAGTCTG-GACGAT-CAGGA-  1130

seq1  AACTAAAATGACTGAC  1162
          |  |||||||||
seq2  ----ACGATGACTGAC  1142

seq1: chr4_45953821_45954514
seq2: B6Ng01-091F17.g_69_764 (reverse)

seq1  CAATGAGCACCTGATGGTCGTGGTGGAGGTGAG-AGCCACTGCCCTCAGG  49
      ||||| ||||||||||||||||||| ||  ||| ||||||||||||||  
seq2  CAATGGGCACCTGATGGTCGTGGTGAAGAAGAGAAGCCACTGCCCTCAAA  50

seq1  CCCTGGCCTATCCTGG-AAGCCCCCTCCAGCCCTCTCCACCCCTACCCCC  98
       | ||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACATGGCCTATCCTGGAAAGCCCCCTCCAGCCCTCTCCACCCCTACCCCC  100

seq1  ATGCAGTCTGTTGAGCAGGCCACTCTACGATTCCAGTTCAGGACCTTGAA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTCTGTTGAGCAGGCCACTCTACGATTCCAGTTCAGGACCTTGAA  150

seq1  CCTGTTGTCTGTTTGATTTGTTATTTTTGTTTTGTTTTTAACTTTTTCTC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGTCTGTTTGATTTGTTATTTTTGTTTTGTTTTTAACTTTTTCTC  200

seq1  CTCTTGGTTTGTTTGTTTGTCTATTTATTTATTTATTTATTTATTTTGGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGGTTTGTTTGTTTGTCTATTTATTTATTTATTTATTTATTTTGGT  250

seq1  TTTTTCGAGACAGGGTTTCTCTGCGTAGCCCTGGCTGTCCTGGAACTCAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCGAGACAGGGTTTCTCTGCGTAGCCCTGGCTGTCCTGGAACTCAC  300

seq1  TTTGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCCTCTGCCTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCCTCTGCCTC  350

seq1  CCAAGTGCTGGGATTAAAGGCATGCGCCACCACTGCCCAGCTTAACTTTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGCTGGGATTAAAGGCATGCGCCACCACTGCCCAGCTTAACTTTC  400

seq1  CCTCTTGCACACTAAACATCGTTCATCAGTGTGGCATTTATTCATTTACT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTGCACACTAAACATCGTTCATCAGTGTGGCATTTATTCATTTACT  450

seq1  TAAGCTGCCAGCAAACATTCTTGGACAAAGTTTGTGTGTCAGTTAAAGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGCCAGCAAACATTCTTGGACAAAGTTTGTGTGTCAGTTAAAGAA  500

seq1  TATGCCAAGAGGAACAAACCCAACCTTGCCCCCAAGGGCCCCCACGGGCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCAAGAGGAACAAACCCAACCTTGCCCCCAAGGGCCCCCACGGGCT  550

seq1  GGGTTCTGCCAGGCAGGGCTCATCTGTCTTTGTGGTCACATCCTGTTGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTGCCAGGCAGGGCTCATCTGTCTTTGTGGTCACATCCTGTTGCT  600

seq1  TTCTAGTGAACACACAGCGTTGTTCCAGTTTGAAACGCTATGGACTCGGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTGAACACACAGCGTTGTTCCAGTTTGAAACGCTATGGACTCGGG  650

seq1  TCTCTAGAGTTAGGTAGGGGTTTGCTATCCACTCATTCAGGAATTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGAGTTAGGTAGGGGTTTGCTATCCACTCATTCAGGAATTC  696