BAC Information

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BAC

Clone NameB6Ng01-091I22
Chromosome4 (Build37)
Map Location 6,826,491 - 6,827,678
singlet/doubletsinglet
Overlap geneTox
Upstream gene3110003A22Rik, Cyp7a1, Sdcbp, Nsmaf, LOC100039397, LOC100039414
Downstream geneLOC100039421, LOC666700
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091I22.bB6Ng01-091I22.g
ACCDH903549DH903550
length1,2401,168
definitionDH903549|Mus musculus domesticus DNA, BAC clone: B6Ng01-091I22, 5' end.DH903550|Mus musculus domesticus DNA, BAC clone: B6Ng01-091I22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccattttttaatggggttatttgaat
ttctgcagtgcagcttcttgagctctttgtatatcttggatattagtccc
ctatcagatttagggttggtaaaaattattttccaatttttaaacagaat
tctttttttttaatatatgaacagggatttttatttatatatttaggaat
acacatacacaaagacacatacagctgaaataaaaaaaaaaattaaaaga
ccattcacttgagcggtggtactagggaaagcttgcagaaaaaaggagaa
gggacaaaggaatataatgattatgttttagttaaacagaattcttatac
agcctagtgtcaaatacttagggatgatgccacccactatgaacacctcc
ggaaaaaaatttaaaaatttcccatagacatgcccaaagggcactctgat
ctgggcaatcactctattgaggccttccttttagatgacgctaggctggg
tcaagttgacaattaaagctaactaggacaacagtttagcagtttcatac
aaaaattaaacattttaaaatgaaattcggcaatcatacatcttagtatt
atttattcaaaggaaatggctgtatgttcacaccaaaactgtatattggt
gtctaaaagcaaattcaatcataattgtccaaacaagaagatatcagtga
tatctttcaataagtgaattgacagtctgatatatctagacaaaggagta
ctagttaatactaggcagaagtgaactagttagccactcagaaattcagg
aaatatacatggacatcactaaggaaagaagccaaaggttatgatccatt
taattccaactatatgatattctgaaaaagaaaaagagtatttgcaggat
ttctgggtctgggaggatgaacaagcagagtaccaagaggatctgtgtga
tgatataatgagatatatatgtcactatgtatgtccaaatccatagagga
catatatgaatatgaaactctgttataaaacagtgaacttgggaaaagta
aaacattgcagagtattcagtggtatcaactagaatggtactgttcgaat
aatggggagtattcactcaagttgcaataaaggctgcatatgaaactttg
taacttcaatcaattcctatgatctgaagctactcacgagaattgtagaa
ctgcagttggcaaagaagcagaaatatctctgtgggatgc
gaattcttaacaatactttgggagagctctcttggagaattcagcttact
gtttaacagtttctgactaattttattaacctgtacatctgagaggatca
accccctctgggtttaattagaaggaaattcaatttggatctaaatgtca
acagtggttactaattatggcaacgctcgggacaggatagcctggctgca
atcaggcaggttcctagtaacattaacgccttctttctgagttccaagag
agtttggatgttttaaaataaatacaattcagcatgggacactgctaata
tcatgagcccctactgctaggtgcagacatgcagaagtggatgccaaatt
aaattacaggaatctctcaaacatatagctgaataataagcagctacaaa
actaggtcagggttgaaaagctggctccgaatgcccctcccccaacatgc
aaaataaataccccactatctctgaatagaaatcattcttttgttatgcc
ctttgtcaagaatacattattgcaaaatgatatttatttccacaatcttc
acagctgtgagcacaactaaattaatctttctagaactgatttcatttgc
aatttcatgattacaattataaaatgtaaatttattacttaaaaaagaaa
tgattataaaagacatagatttaaaaaaagacagttccttatctgttggc
ttgtttcacttaatactaatgaaataaatagctgactaaccctgggataa
aaacaaacagtctgaagatggttgtaaaatatgggaaatgaaagctagga
agacaattttaaaaaagcagcccttttaatgcagagcatacaggaatcat
atggcttaaggaaagaccagaacactgcctgttgttgcagtgaggttgat
actcatggtcagccttctgaagtgtttctgttgctccatggcattaaata
caaaacatacttgggtgctactgatctttccccacctgcagctttcagtt
ttattctctaaatgtaatgctagaaagccatttcagacctgtttatattg
atgacccaaataatagattcatttatagaattccattttacaagatttct
ttttccttttacaaaattagtcaaagattgcatttcctctgaatatgtct
taataattccacatgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_6826491_6827678
seq2: B6Ng01-091I22.g_66_1233

seq1  GAATTCTTAACAATACTTTGGGAGAGCTCTCTTGGAGAATTCAGCTTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAACAATACTTTGGGAGAGCTCTCTTGGAGAATTCAGCTTACT  50

seq1  GTTTAACAGTTTCTGACTAATTTTATTAACCTGTACATCTGAGAGGATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAACAGTTTCTGACTAATTTTATTAACCTGTACATCTGAGAGGATCA  100

seq1  ACCCCCTCTGGGTTTAATTAGAAGGAAATTCAATTTGGATCTAAATGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCTCTGGGTTTAATTAGAAGGAAATTCAATTTGGATCTAAATGTCA  150

seq1  ACAGTGGTTACTAATTATGGCAACGCTCGGGACAGGATAGCCTGGCTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGTTACTAATTATGGCAACGCTCGGGACAGGATAGCCTGGCTGCA  200

seq1  ATCAGGCAGGTTCCTAGTAACATTAACGCCTTCTTTCTGAGTTCCAAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGCAGGTTCCTAGTAACATTAACGCCTTCTTTCTGAGTTCCAAGAG  250

seq1  AGTTTGGATGTTTTAAAATAAATACAATTCAGCATGGGACACTGCTAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGATGTTTTAAAATAAATACAATTCAGCATGGGACACTGCTAATA  300

seq1  TCATGAGCCCCTACTGCTAGGTGCAGACATGCAGAAGTGGATGCCAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAGCCCCTACTGCTAGGTGCAGACATGCAGAAGTGGATGCCAAATT  350

seq1  AAATTACAGGAATCTCTCAAACATATAGCTGAATAATAAGCAGCTACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACAGGAATCTCTCAAACATATAGCTGAATAATAAGCAGCTACAAA  400

seq1  ACTAGGTCAGGGTTGAAAAGCTGGCTCCGAATGCCCCTCCCCCAACATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGTCAGGGTTGAAAAGCTGGCTCCGAATGCCCCTCCCCCAACATGC  450

seq1  AAAATAAATACCCCACTATCTCTGAATAGAAATCATTCTTTTGTTATGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATACCCCACTATCTCTGAATAGAAATCATTCTTTTGTTATGCC  500

seq1  CTTTGTCAAGAATACATTATTGCAAAATGATATTTATTTCCACAATCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCAAGAATACATTATTGCAAAATGATATTTATTTCCACAATCTTC  550

seq1  ACAGCTGTGAGCACAACTAAATTAATCTTTCTAGAACTGATTTCATTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGTGAGCACAACTAAATTAATCTTTCTAGAACTGATTTCATTTGC  600

seq1  AATTTCATGATTACAATTATAAAATGTAAATTTATTACTTAAAAAAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCATGATTACAATTATAAAATGTAAATTTATTACTTAAAAAAGAAA  650

seq1  TGATTATAAAAGACATAGATTTAAAAAAAGACAGTTCCTTATCTGTTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATAAAAGACATAGATTTAAAAAAAGACAGTTCCTTATCTGTTGGC  700

seq1  TTGTTTCACTTAATACTAATGAAATAAATAGCTGACTAACCCTGGGATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCACTTAATACTAATGAAATAAATAGCTGACTAACCCTGGGATAA  750

seq1  AAACAAACAGTCTGAAGATGGTTGTAAAATATGGGAAATGAAAGCTAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAGTCTGAAGATGGTTGTAAAATATGGGAAATGAAAGCTAGGA  800

seq1  AGACAATTTTAAAAAAGCAGCCCTTTTAATGCAGAGCATACAGGAATCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATTTTAAAAAAGCAGCCCTTTTAATGCAGAGCATACAGGAATCAT  850

seq1  ATGGCTTAAGGAAAGACCAGAACACTGCCTGTTGTTGCAGTGAGGTTGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTTAAGGAAAGACCAGAACACTGCCTGTTGTTGCAGTGAGGTTGAT  900

seq1  ACTCATGGTCAGCCTTCTGAAGTGTTTCTGTTGCTCCATGGCATTAAATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGGTCAGCCTTCTGAAGTGTTTCTGTTGCTCCATGGCATTAAATA  950

seq1  CAAAACATACTTGGGTGCTACTGATCTTTCCCCACCTGCAGCTTTCAGTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACATACTTGGGTGCTACTGATCTTTCCCCACCTGCAGCTTTCAGTT  1000

seq1  TTATTCTCTTAAATGTTAAATGCTAGAAAGCCATTTTCAGA-CTGTTTAA  1049
      |||||||| |||||||  ||||||||||||||| ||||||| |||||| |
seq2  TTATTCTC-TAAATGT--AATGCTAGAAAGCCA-TTTCAGACCTGTTT-A  1045

seq1  TATTGATGACCCAAATAATAGATTCATTTATAGAAATCCATATTTACAAG  1099
      ||||||||||||||||||||||||||||||||||| ||||| ||||||||
seq2  TATTGATGACCCAAATAATAGATTCATTTATAGAATTCCAT-TTTACAAG  1094

seq1  ATTTC-TTTTCTTTTTAGCAGAAATTAGTCAATAGATTGGTATTTTCTTC  1148
      ||||| ||||| ||||| || ||||||||||| ||||| | |||   | |
seq2  ATTTCTTTTTCCTTTTA-CA-AAATTAGTCAA-AGATT-GCATT---TCC  1137

seq1  TTTAAATATATTGTTTCTTATAATTAATATCCACATGTCT  1188
      | | ||||     | ||||   | |||| |||||||||||
seq2  TCTGAATA-----TGTCTT---AATAAT-TCCACATGTCT  1168