BAC Information

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BAC

Clone NameB6Ng01-091J17
Chromosome4 (Build37)
Map Location 68,570,869 - 68,703,298
singlet/doubletdoublet
Overlap geneDbc1
Upstream geneLOC433715, Tcp1-ps1
Downstream geneLOC622491, LOC433716, LOC100039888, LOC242497
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091J17.bB6Ng01-091J17.g
ACCDH903584DH903585
length1,0911,027
definitionDH903584|Mus musculus domesticus DNA, BAC clone: B6Ng01-091J17, 5' end.DH903585|Mus musculus domesticus DNA, BAC clone: B6Ng01-091J17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,570,869 - 68,571,963)(68,702,271 - 68,703,298)
sequence
gaattccactcatttctttgcactaacttatctttatttctcctaagagg
cctccaccctgtcctgcttgcacagtgtgggataacaatgagcctttgtg
ctttgtgtccttgcatcagaaggaggcacatcccatctccacatttcaat
gtatagtgagaagattccttcactctacctcatagtagactcacaccact
ctccaccagcatccttctcttaaaatcaacacacaatagatactctacaa
gtagaaagccttatgttccaggaccatggctgctgagccaaggacctttg
agtcagccctcagcatcttccacaatgaatttgagaatagttgatcatct
ataacatttacaaaagaaatttctaccactggggtttacagcctaacaat
tctggactagttgtaggctaagtacagtcattgatcctcgtgaccttcca
ggagtcacaggcgcccactgctgtgtgataaactagttgatccagagagt
tgacactggctgaaacataaagatgatttggttcccatggttgaattggg
cagtatcatgaaatgaatcaagtttagcacctacacatcctgctttctga
ttcttgcatcccaagttatttacatcaaagccacataccgaaatctataa
cagcatgccccagcagccactaccaagttcatcctctagtctgtacataa
attacttgcccagtattcacattctgggccagaaggcaaaaaggaaggtc
ctgactgctgcttcataattccctgatgatctggattaataattacaagt
gaaggctatactcagcccctgctggctccacataagctgttctggaggtc
tcatcaagccttttacttccaaacttacgtcttcagccaaattttctcac
tgacatgcagacctgcaaagctgaaccttgactatgttaattaacttccc
caagtcttggttccctgcatctttcaggtaaagactggcattgaatagga
tgctttaaatatagctatttcagctctggtatcagctgatcatacaacca
tagaggtctgtgaccactacatcatacttaccagcagcatc
gaattccctttctgaatattgccaagaagaatctctcttactttcttact
acccataagatcctgtctattcacataatttatacacaaaatataaaatt
ttagacatgaatttgaaatatgtaatggacctgtcatttcaatctagtta
tagctcagggtaggaaaatagcttctctacttaatatatggccctccctt
attagttctaccaggtcaagagaagtacaattggactcctggacaatcac
actactcttctatgcaattcgaaatccttaatgttagaagaggactaggt
tacctatgtccactggatctgtaatataaaattttatcaagagataaagc
aagaaagtttgagtaagcctactagactatggttaatatgaacataactg
ttcttggacagggaagtagaatatatagatagacaaaattgtgatggaag
actatgtaatccagaacggagaaagaggtgacagcgaccagcagtgtgag
gcttggaggaatgatgaatgaaactcatatgttaagttttattggaatat
ctcccttctattaacttgcgtatcttgtaggaaattatattcctggaaat
actataaataattacacagatttttgattgagaatgaattagctatctct
catcttccatctaatttaattaaggaatagttattgaacatgtttttata
aacctggctcacaagtcaaaaatatatgaacaagacacttagatcttctg
gtctccttgatcttaaattttatttaatagaataaaaataatacaagcaa
gacataaaacctgtctataaaataagcaagtatatggtagcagattaaca
aacatgctaagtgattagattgatggagtctgaggactaaggtgatgagg
aaagttttctcttagaagaatgttcagaaaatgctcccaaaatagtgaca
gaaaccaatcctagagttaggactggctatcctgaaatgagaagctgatg
tttaatagtttagaaagtcttctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_68570869_68571963
seq2: B6Ng01-091J17.b_45_1135

seq1  GAATTCCACTCATTTCTTTGCACTAACTTATCTTTATTTCTCCTAAGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTCATTTCTTTGCACTAACTTATCTTTATTTCTCCTAAGAGG  50

seq1  CCTCCACCCTGTCCTGCTTGCACAGTGTGGGATAACAATGAGCCTTTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACCCTGTCCTGCTTGCACAGTGTGGGATAACAATGAGCCTTTGTG  100

seq1  CTTTGTGTCCTTGCATCAGAAGGAGGCACATCCCATCTCCACATTTCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGTCCTTGCATCAGAAGGAGGCACATCCCATCTCCACATTTCAAT  150

seq1  GTATAGTGAGAAGATTCCTTCACTCTACCTCATAGTAGACTCACACCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGTGAGAAGATTCCTTCACTCTACCTCATAGTAGACTCACACCACT  200

seq1  CTCCACCAGCATCCTTCTCTTAAAATCAACACACAATAGATACTCTACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCAGCATCCTTCTCTTAAAATCAACACACAATAGATACTCTACAA  250

seq1  GTAGAAAGCCTTATGTTCCAGGACCATGGCTGCTGAGCCAAGGACCTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAGCCTTATGTTCCAGGACCATGGCTGCTGAGCCAAGGACCTTTG  300

seq1  AGTCAGCCCTCAGCATCTTCCACAATGAATTTGAGAATAGTTGATCATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCCCTCAGCATCTTCCACAATGAATTTGAGAATAGTTGATCATCT  350

seq1  ATAACATTTACAAAAGAAATTTCTACCACTGGGGTTTACAGCCTAACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATTTACAAAAGAAATTTCTACCACTGGGGTTTACAGCCTAACAAT  400

seq1  TCTGGACTAGTTGTAGGCTAAGTACAGTCATTGATCCTCGTGACCTTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGACTAGTTGTAGGCTAAGTACAGTCATTGATCCTCGTGACCTTCCA  450

seq1  GGAGTCACAGGCGCCCACTGCTGTGTGATAAACTAGTTGATCCAGAGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCACAGGCGCCCACTGCTGTGTGATAAACTAGTTGATCCAGAGAGT  500

seq1  TGACACTGGCTGAAACATAAAGATGATTTGGTTCCCATGGTTGAATTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACTGGCTGAAACATAAAGATGATTTGGTTCCCATGGTTGAATTGGG  550

seq1  CAGTATCATGAAATGAATCAAGTTTAGCACCTACACATCCTGCTTTCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATCATGAAATGAATCAAGTTTAGCACCTACACATCCTGCTTTCTGA  600

seq1  TTCTTGCATCCCAAGTTATTTACATCAAAGCCACATACCGAAATCTATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCATCCCAAGTTATTTACATCAAAGCCACATACCGAAATCTATAA  650

seq1  CAGCATGCCCCAGCAGCCACTACCAAGTTCATCCTCTAGTCTGTACATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGCCCCAGCAGCCACTACCAAGTTCATCCTCTAGTCTGTACATAA  700

seq1  ATTACTTGCCCAGTATTCACATTCTGGGCCAGAAGGCAAAAAGGAAGGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTGCCCAGTATTCACATTCTGGGCCAGAAGGCAAAAAGGAAGGTC  750

seq1  CTGACTGCTGCTTCATAATTCCCTGATGATCTGGATTAATAATTACAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGCTGCTTCATAATTCCCTGATGATCTGGATTAATAATTACAAGT  800

seq1  GAAGGCTATACTCAGCCCCTGCTGGCTCCACATAAGCTGTTCTGGAGGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTATACTCAGCCCCTGCTGGCTCCACATAAGCTGTTCTGGAGGTC  850

seq1  TCATCAAGCCTTTTACTTCCAAACTTACGTCTTCAGCCAAATTTTCTCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAAGCCTTTTACTTCCAAACTTACGTCTTCAGCCAAATTTTCTCAC  900

seq1  TGACATGCAGACCTGCAAAGCTGAACCTTGACTATGTTAATTAACTTCCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGCAGACCTGCAAAGCTGAACCTTGACTATGTTAATTAACTTCCC  950

seq1  CAAGTCTTGGTTCCCTGCATCTTTCAGGGTAAAGACTGGCATTGAATAGG  1000
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAAGTCTTGGTTCCCTGCATCTTTCA-GGTAAAGACTGGCATTGAATAGG  999

seq1  ATGCTTTAAATATAGCTATTTCAGCTCTGGTATCAGCTGAATCATACAAC  1050
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATGCTTTAAATATAGCTATTTCAGCTCTGGTATCAGCTG-ATCATACAAC  1048

seq1  CATAGAGGTCTGTGACCACTACATCATACTTACCAAGCAAGCATC  1095
      |||||||||||||||||||||||||||||||||| ||| ||||||
seq2  CATAGAGGTCTGTGACCACTACATCATACTTACC-AGC-AGCATC  1091

seq1: chr4_68702271_68703298
seq2: B6Ng01-091J17.g_69_1095 (reverse)

seq1  AGAGAGA--ACTATCTAAACTATCTAAACCTCAGCTTCCTCATTTCAGGA  48
      |||||||  ||| |||||||||| ||||| ||||||| ||||||||||||
seq2  AGAGAGAAGACTTTCTAAACTAT-TAAACATCAGCTT-CTCATTTCAGGA  48

seq1  TAGCCAGTTCTAACTCCTAGGGTTGGTTTCTGTCACTATTTTGGGAGCAT  98
      |||||||| |||||| ||||| ||||||||||||||||||||||||||||
seq2  TAGCCAGTCCTAACT-CTAGGATTGGTTTCTGTCACTATTTTGGGAGCAT  97

seq1  TTTCTGAACATTCTTCTTAAGGGAAAACTTTCCTCATCACCTTAGTCCTC  148
      |||||||||||||||| |||| ||||||||||||||||||||||||||||
seq2  TTTCTGAACATTCTTC-TAAGAGAAAACTTTCCTCATCACCTTAGTCCTC  146

seq1  AGACTCCATCAAATCTAATCACTTAGCATGTTTGTTAATCTGCTACCATA  198
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGACTCCATC-AATCTAATCACTTAGCATGTTTGTTAATCTGCTACCATA  195

seq1  TACTTGCTTA-TTTATAGACAGGTTTTATGTCTTGCTTGTATTATTTTTA  247
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TACTTGCTTATTTTATAGACAGGTTTTATGTCTTGCTTGTATTATTTTTA  245

seq1  TTCTATTAAATAAAATTTAAGATCAAGGAGACCAGAAGATCTAAGTGTCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTAAATAAAATTTAAGATCAAGGAGACCAGAAGATCTAAGTGTCT  295

seq1  TGTTCATATATTTTTGACTTGTGAGCCAGGTTTAT-AAAACATGTTCAAT  346
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGTTCATATATTTTTGACTTGTGAGCCAGGTTTATAAAAACATGTTCAAT  345

seq1  AACTATTCCTTAATTAAATTAGATGGAAGATGAGAGATAGCTAATTCATT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTCCTTAATTAAATTAGATGGAAGATGAGAGATAGCTAATTCATT  395

seq1  CTCAATCAAAAATCTGTGTAATTATTTATAGTATTTCCAGGAATATAATT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATCAAAAATCTGTGTAATTATTTATAGTATTTCCAGGAATATAATT  445

seq1  TCCTACAAGATACGCAAGTTAATAGAAGGGAGATATTCCAATAAAACTTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACAAGATACGCAAGTTAATAGAAGGGAGATATTCCAATAAAACTTA  495

seq1  ACATATGAGTTTCATTCATCATTCCTCCAAGCCTCACACTGCTGGTCGCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGAGTTTCATTCATCATTCCTCCAAGCCTCACACTGCTGGTCGCT  545

seq1  GTCACCTCTTTCTCCGTTCTGGATTACATAGTCTTCCATCACAATTTTGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTCTTTCTCCGTTCTGGATTACATAGTCTTCCATCACAATTTTGT  595

seq1  CTATCTATATATTCTACTTCCCTGTCCAAGAACAGTTATGTTCATATTAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTATATATTCTACTTCCCTGTCCAAGAACAGTTATGTTCATATTAA  645

seq1  CCATAGTCTAGTAGGCTTACTCAAACTTTCTTGCTTTATCTCTTGATAAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGTCTAGTAGGCTTACTCAAACTTTCTTGCTTTATCTCTTGATAAA  695

seq1  ATTTTATATTACAGATCCAGTGGACATAGGTAACCTAGTCCTCTTCTAAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATATTACAGATCCAGTGGACATAGGTAACCTAGTCCTCTTCTAAC  745

seq1  ATTAAGGATTTCGAATTGCATAGAAGAGTAGTGTGATTGTCCAGGAGTCC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGGATTTCGAATTGCATAGAAGAGTAGTGTGATTGTCCAGGAGTCC  795

seq1  AATTGTACTTCTCTTGACCTGGTAGAACTAATAAGGGAGGGCCATATATT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTACTTCTCTTGACCTGGTAGAACTAATAAGGGAGGGCCATATATT  845

seq1  AAGTAGAGAAGCTATTTTCCTACCCTGAGCTATAACTAGATTGAAATGAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGAGAAGCTATTTTCCTACCCTGAGCTATAACTAGATTGAAATGAC  895

seq1  AGGTCCATTACATATTTCAAATTCATGTCTAAAATTTTATATTTTGTGTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCATTACATATTTCAAATTCATGTCTAAAATTTTATATTTTGTGTA  945

seq1  TAAATTATGTGAATAGACAGGATCTTATGGGTAGTAAGAAAGTAAGAGAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTATGTGAATAGACAGGATCTTATGGGTAGTAAGAAAGTAAGAGAG  995

seq1  ATTCTTCTTGGCAATATTCAGAAAGGGAATTC  1028
      ||||||||||||||||||||||||||||||||
seq2  ATTCTTCTTGGCAATATTCAGAAAGGGAATTC  1027