BAC Information

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BAC

Clone NameB6Ng01-091L21
Chromosome4 (Build37)
Map Location 126,453,480 - 126,616,612
singlet/doubletdoublet
Overlap geneAU040320
Upstream geneCsf3r, Mrps15, 1810007P19Rik, LOC100039645, Lsm10, Stk40, 2610027C15Rik, 1700029G01Rik, Thrap3, Mtap7d1, Trappc3, Col8a2, EG667193, Adprhl2, Tekt2, Eif2c3, Eif2c1, LOC100039351, Eif2c4, Clspn, LOC665197, 5730409E04Rik, LOC620877, Psmb2, Tcfap2e, Ncdn
Downstream geneSfpq, Zmym1, LOC665245, Zmym6, LOC100039968, LOC621588, Dlgap3, BC003266, Gja4, Gjb3, Gjb4, Gjb5, LOC667296, LOC635169
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091L21.bB6Ng01-091L21.g
ACCDH903686DH903687
length1,117354
definitionDH903686|Mus musculus domesticus DNA, BAC clone: B6Ng01-091L21, 5' end.DH903687|Mus musculus domesticus DNA, BAC clone: B6Ng01-091L21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,615,492 - 126,616,612)(126,453,480 - 126,453,833)
sequence
gaattcctagacatatatgacttatcaaatgaaaaggcacagatccagaa
caatcaacaaaattgaaatgctaataaactgtctccgagtaaagctcagg
ccagctcagactggacacactcacttctggagtctaccaaatcttttttt
gttttgtttttcgagacagggtttctgtgtagccctggctgtcctggaac
ttaccaaatcttaagtgaacactttacaccagtggttctctgttataata
gaatataatagaaatagatggaaaaccaacaaactcattctgttcaggac
acacacacacacactcctcaccccataatatattaattattctagtgaga
gtcaacattctcaacccttttgcaaagtggattcaggaacacattaagaa
gttcatatgtcatgaacaatcttactttattaaagttatactactgggtc
tcaaaccctgtaaaaatgaatagctgaggtgcctatttaacatatcatag
tggacatggcctccaggttctctcagcatctctcagtccttaactgttac
gcggtgtggctggcatactcacccccatatgtatagttgtccagccctga
ggatgggctgccttccccagcggcccctccctatatagttcagtggttcg
ctcacttggcccttttgtccatgttttacttctggctctccctccgttcc
tcctcacacctgcctcagggtcaggttcattttggagtcttcccggatgc
ccctgcctctggtagtgctctccctttatctacaatacattttcttgaga
ctccaccatacctagctgcagtccttgtcctccttttttatctctttttt
tttcatttttcacgtgctgaaacttgcttcttgctgacaggaagtataat
tcagcataaaaatagactaaaggacagaaaaagttcagcatccctttatg
gtaaaaagtcctgaagtaactaggacgtgaagtagcagtttccatgtaat
aaaaactacatacagcaatggacactgaacattttggggaaatctgagaa
tgacttcctccatgtctggatggatacaagatgcacccctcagtcatgta
gagcctagataagcaaa
gaattcccctgtcaatcacaaggggactagacagtaccatagataagaag
gagttccccttgatggggagttagccagcactgatggtgtctaaggagtg
tgaagtggagcaaccctggccgagacccgactgaagctctggacctctgt
ccctaaggatggtgctggagcgtcttgcctggttcccctggaaaactcac
tctgcagacattgtttccaggaatgttcttccagctggctcgatgttatg
ttttgattctagcgcacaacacattttggttgagataaatgtgtgctccc
aagttctctcacctgtaggtagtaaagggggaggtgagaggaggagtggg
gttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_126615492_126616612
seq2: B6Ng01-091L21.b_47_1163 (reverse)

seq1  TTTGCTTTATCTTAGGCTCTACACTGACTGAGAGTGGCATCTTTGTATCA  50
      ||||| ||||| ||||||||||| |||||||| |  ||||| ||||||| 
seq2  TTTGC-TTATC-TAGGCTCTACA-TGACTGAGGGGTGCATC-TTGTATCC  46

seq1  TTCCAGACATGGAGGAAGTCA-TCTCAGATTTCCCCAAAATGTTCAGTGT  99
       |||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATCCAGACATGGAGGAAGTCATTCTCAGATTTCCCCAAAATGTTCAGTGT  96

seq1  CCATTTGCTGTATGTAGTTTTTATTACATGGAAACTGCTACTTCACGTCC  149
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCA-TTGCTGTATGTAGTTTTTATTACATGGAAACTGCTACTTCACGTCC  145

seq1  TAGTTACTTCAGGACTTTTTACCATAAAGGGATGCTGAACTTTTTCTGTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTACTTCAGGACTTTTTACCATAAAGGGATGCTGAACTTTTTCTGTC  195

seq1  CTTTAGTCTATTTTTATGCTGAATTATACTTCCTGTCAGCAAGAAGCAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTCTATTTTTATGCTGAATTATACTTCCTGTCAGCAAGAAGCAAG  245

seq1  TTTCAGCACCTGAAAAATGAAAAAAAAAGAGATAAAAAAGGAGGACAAGG  299
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCACGTGAAAAATGAAAAAAAAAGAGATAAAAAAGGAGGACAAGG  295

seq1  ACTGCAGCTAGGTATGGTGGAGTCTCAAGAAAATGTATTGTAGATAAAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGCTAGGTATGGTGGAGTCTCAAGAAAATGTATTGTAGATAAAGG  345

seq1  GAGAGCACTACCAGAGGCAGGGGCATCCGGGAAGACTCCAAAATGAACCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCACTACCAGAGGCAGGGGCATCCGGGAAGACTCCAAAATGAACCT  395

seq1  GACCCTGAGGCAGGTGTGAGGAGGAACGGAGGGAGAGCCAGAAGTAAAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGAGGCAGGTGTGAGGAGGAACGGAGGGAGAGCCAGAAGTAAAAC  445

seq1  ATGGACAAAAGGGCCAAGTGAGCGAACCACTGAACTATATAGGGAGGGGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACAAAAGGGCCAAGTGAGCGAACCACTGAACTATATAGGGAGGGGC  495

seq1  CGCTGGGGAAGGCAGCCCATCCTCAGGGCTGGACAACTATACATATGGGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGGGGAAGGCAGCCCATCCTCAGGGCTGGACAACTATACATATGGGG  545

seq1  GTGAGTATGCCAGCCACACCGCGTAACAGTTAAGGACTGAGAGATGCTGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTATGCCAGCCACACCGCGTAACAGTTAAGGACTGAGAGATGCTGA  595

seq1  GAGAACCTGGAGGCCATGTCCACTATGATATGTTAAATAGGCACCTCAGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACCTGGAGGCCATGTCCACTATGATATGTTAAATAGGCACCTCAGC  645

seq1  TATTCATTTTTACAGGGTTTGAGACCCAGTAGTATAACTTTAATAAAGTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATTTTTACAGGGTTTGAGACCCAGTAGTATAACTTTAATAAAGTA  695

seq1  AGATTGTTCATGACATATGAACTTCTTAATGTGTTCCTGAATCCACTTTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGTTCATGACATATGAACTTCTTAATGTGTTCCTGAATCCACTTTG  745

seq1  CAAAAGGGTTGAGAATGTTGACTCTCACTAGAATAATTAATATATTATGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGGTTGAGAATGTTGACTCTCACTAGAATAATTAATATATTATGG  795

seq1  GGTGAGGAGTGTGTGTGTGTGTGTCCTGAACAGAATGAGTTTGTTGGTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGGAGTGTGTGTGTGTGTGTCCTGAACAGAATGAGTTTGTTGGTTT  845

seq1  TCCATCTATTTCTATTATATTCTATTATAACAGAGAACCACTGGTGTAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTATTTCTATTATATTCTATTATAACAGAGAACCACTGGTGTAAA  895

seq1  GTGTTCACTTAAGATTTGGTAAGTTCCAGGACAGCCAGGGCTACACAGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCACTTAAGATTTGGTAAGTTCCAGGACAGCCAGGGCTACACAGAA  945

seq1  ACCCTGTCTCGAAAAACAAAACAAAAAAAGATTTGGTAGACTCCAGAAGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTCTCGAAAAACAAAACAAAAAAAGATTTGGTAGACTCCAGAAGT  995

seq1  GAGTGTGTCCAGTCTGAGCTGGCCTGAGCTTTACTCGGAGACAGTTTATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGTCCAGTCTGAGCTGGCCTGAGCTTTACTCGGAGACAGTTTATT  1045

seq1  AGCATTTCAATTTTGTTGATTGTTCTGGATCTGTGCCTTTTCATTTGATA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTCAATTTTGTTGATTGTTCTGGATCTGTGCCTTTTCATTTGATA  1095

seq1  AGTCATATATGTCTAGGAATTC  1121
      ||||||||||||||||||||||
seq2  AGTCATATATGTCTAGGAATTC  1117

seq1: chr4_126453480_126453833
seq2: B6Ng01-091L21.g_65_418

seq1  GAATTCCCCTGTCAATCACAAGGGGACTAGACAGTACCATAGATAAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCTGTCAATCACAAGGGGACTAGACAGTACCATAGATAAGAAG  50

seq1  GAGTTCCCCTTGATGGGGAGTTAGCCAGCACTGATGGTGTCTAAGGAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCCCTTGATGGGGAGTTAGCCAGCACTGATGGTGTCTAAGGAGTG  100

seq1  TGAAGTGGAGCAACCCTGGCCGAGACCCGACTGAAGCTCTGGACCTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGGAGCAACCCTGGCCGAGACCCGACTGAAGCTCTGGACCTCTGT  150

seq1  CCCTAAGGATGGTGCTGGAGCGTCTTGCCTGGTTCCCCTGGAAAACTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGGATGGTGCTGGAGCGTCTTGCCTGGTTCCCCTGGAAAACTCAC  200

seq1  TCTGCAGACATTGTTTCCAGGAATGTTCTTCCAGCTGGCTCGATGTTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGACATTGTTTCCAGGAATGTTCTTCCAGCTGGCTCGATGTTATG  250

seq1  TTTTGATTCTAGCGCACAACACATTTTGGTTGAGATAAATGTGTGCTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATTCTAGCGCACAACACATTTTGGTTGAGATAAATGTGTGCTCCC  300

seq1  AAGTTCTCTCACCTGTAGGTAGTAAAGGGGGAGGTGAGAGGAGGAGTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTCTCACCTGTAGGTAGTAAAGGGGGAGGTGAGAGGAGGAGTGGG  350

seq1  GTTT  354
      ||||
seq2  GTTT  354