BAC Information

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BAC

Clone NameB6Ng01-091P19
Chromosome4 (Build37)
Map Location 5,895,150 - 6,024,952
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039338, 1700012H17Rik, LOC669309
Downstream gene3110003A22Rik, Cyp7a1, Sdcbp, Nsmaf, LOC100039397, LOC100039414, Tox, LOC100039421, LOC666700
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091P19.bB6Ng01-091P19.g
ACCDH903872DH903873
length4421,150
definitionDH903872|Mus musculus domesticus DNA, BAC clone: B6Ng01-091P19, 5' end.DH903873|Mus musculus domesticus DNA, BAC clone: B6Ng01-091P19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,024,510 - 6,024,952)(5,895,150 - 5,896,280)
sequence
gaattctcaatcctaatagtatctaaccaagtagaatccctcctccaaag
aggtcacacttgtaacaaaattgaaaattaaaaaattaggccattgggca
aacatttagagaggatcatttttcttttttctttttaattaaagaaaaaa
aattatgtgtatggatgttttgcctgtaggtatgtctgatactgaaagaa
gtcagaaaagtgcatcagagtcccaggaactacagttgcagtaggtgtgt
gggctgtaatgtggggccggacatcaaaatgaggtcctctgatgagcagc
catatttttgactttgggccattgctccactaccaaagaaataattgctg
agtgtgaggtttcagtctctcatctgctgcaaaagtgacctctttggagg
aggggttctacttgtatagatactattgggattgagaattcc

gaattctacatcttcatccaaaggccactaggagaagactggcttctagg
gagctaggatgagggtcttaaagcccatgcccacaatgaaacatttcctc
caacaaggccacacacacctcctaatagtgccacccctgggccaaccata
ttcaaaccatcacatatagacaaacacaaacttgttatgggtatgtagat
aactaggctcagtcttagagagattaaattatttggggggtaacaacaga
acagctcaggaagagatggagagcttgaggacagctaagaggtaaactat
ttttaacaaaagttaaatttatatataaaattaaatggcaacatttagtc
acagatgtttgacctcaatattaaccactctttttggtggtttactaaaa
ttttctcctatttaaggtcatagatatattttaatattttgctaaaatgc
aaaagttcttatctcaggctctggcagaccattggaggtgtggttttaaa
catgcataaaattccagtcaggaaaaagttagcttaaaaatccataacaa
agaagagttaataaacagtctatgtataggtaattttagtttcctgcagc
acaatgcatacacacacacacacacacacacacacacacacacatgcaca
catacacatgcatatatatatatacatatatatgtatatatatatatata
tatatatatatatatatataaacatggatacatctttttgtaaagaaatg
agattcttttgaataatataaatgaagtgtttgagatatgcatgtattat
tggggatctggggagcatgttaaataaaataacataatggggctatcttg
ggttgatagcacccaagatgaaaccaaaccatgtggctgaccactaatct
tgacctgtggcctttacaagaatcaaggaagctatgtcactatatttact
aagtgttggttaagaaagcaaataatcatgtgagttgaccttcaatcttg
gtataccagggcctccaaaaatgatgatattttatttttccttagactaa
gggaggaacactcttcaaaaaaccacttatatggtgatcaaaaaaatgag
gtttcttattcttccttagtaaccgtattttatggttaaggccattttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_6024510_6024952
seq2: B6Ng01-091P19.b_47_488 (reverse)

seq1  GGAATTCTCAATCCTAATAGTATCTAAACAAGTAGAACCCCTCCTCCAAA  50
      |||||||||||||| ||||||||||| |||||||||||||||||||||||
seq2  GGAATTCTCAATCCCAATAGTATCTATACAAGTAGAACCCCTCCTCCAAA  50

seq1  GAGGTCACACTTGTAGCAGCTGAGAGACTGAAACCTCACACTCAGCAATT  100
      ||||||||  ||| ||||| ||||||||||||||||||||||||||||||
seq2  GAGGTCACTTTTGCAGCAGATGAGAGACTGAAACCTCACACTCAGCAATT  100

seq1  ATTTCTTTGGTAGTGGAGCAATGGCCCAAAGTCAAAAATATGGCTGCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATTTCTTTGGTAGTGGAGCAATGGCCCAAAGTCAAAAATATGGCTGCTC-  149

seq1  TTCAGAGGACCTCATTTTGATGTCCGGCCCCACATTACAGCCCACACACC  200
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGGACCTCATTTTGATGTCCGGCCCCACATTACAGCCCACACACC  199

seq1  TACTGCAACTGTAGTTCCTGGGACTCTGATGCACTTTTCTGACTTCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCAACTGTAGTTCCTGGGACTCTGATGCACTTTTCTGACTTCTTTC  249

seq1  AGTATCAGACATACCTACAGGCAAAACATCCATACACATAATTTTTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCAGACATACCTACAGGCAAAACATCCATACACATAATTTTTTTTC  299

seq1  TTTAATTAAAAAGAAAAAAGAAAAATGATCCTCTCTAAATGTTTGCCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTAAAAAGAAAAAAGAAAAATGATCCTCTCTAAATGTTTGCCCAA  349

seq1  TGGCCTAATTTTTTAATTTTCAATTTTGTTACAAGTGTGACCTCTTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTAATTTTTTAATTTTCAATTTTGTTACAAGTGTGACCTCTTTGGA  399

seq1  GGAGGGATTCTACTTGGTTAGATACTATTAGGATTGAGAATTC  443
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGATTCTACTTGGTTAGATACTATTAGGATTGAGAATTC  442


seq1: chr4_5895150_5896280
seq2: B6Ng01-091P19.g_71_1220

seq1  GAATTCTACATCTTCATCCAAAGGCCACTAGGAGAAGACTGGCTTCTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATCTTCATCCAAAGGCCACTAGGAGAAGACTGGCTTCTAGG  50

seq1  GAGCTAGGATGAGGGTCTTAAAGCCCATGCCCACAATGAAACATTTCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAGGATGAGGGTCTTAAAGCCCATGCCCACAATGAAACATTTCCTC  100

seq1  CAACAAGGCCACACACACCTCCTAATAGTGCCACCCCTGGGCCAACCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGGCCACACACACCTCCTAATAGTGCCACCCCTGGGCCAACCATA  150

seq1  TTCAAACCATCACATATAGACAAACACAAACTTGTTATGGGTATGTAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACCATCACATATAGACAAACACAAACTTGTTATGGGTATGTAGAT  200

seq1  AACTAGGCTCAGTCTTAGAGAGATTAAATTATTTGGGGGGTAACAACAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGGCTCAGTCTTAGAGAGATTAAATTATTTGGGGGGTAACAACAGA  250

seq1  ACAGCTCAGGAAGAGATGGAGAGCTTGAGGACAGCTAAGAGGTAAACTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCAGGAAGAGATGGAGAGCTTGAGGACAGCTAAGAGGTAAACTAT  300

seq1  TTTTAACAAAAGTTAAATTTATATATAAAATTAAATGGCAACATTTAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACAAAAGTTAAATTTATATATAAAATTAAATGGCAACATTTAGTC  350

seq1  ACAGATGTTTGACCTCAATATTAACCACTCTTTTTGGTGGTTTACTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGTTTGACCTCAATATTAACCACTCTTTTTGGTGGTTTACTAAAA  400

seq1  TTTTCTCCTATTTAAGGTCATAGATATATTTTAATATTTTGCTAAAATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCTATTTAAGGTCATAGATATATTTTAATATTTTGCTAAAATGC  450

seq1  AAAAGTTCTTATCTCAGGCTCTGGCAGACCATTGGAGGTGTGGTTTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTCTTATCTCAGGCTCTGGCAGACCATTGGAGGTGTGGTTTTAAA  500

seq1  CATGCATAAAATTCCAGTCAGGAAAAAGTTAGCTTAAAAATCCATAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATAAAATTCCAGTCAGGAAAAAGTTAGCTTAAAAATCCATAACAA  550

seq1  AGAAGAGTTAATAAACAGTCTATGTATAGGTAATTTTAGTTTCCTGCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGTTAATAAACAGTCTATGTATAGGTAATTTTAGTTTCCTGCAGC  600

seq1  ACAATGCATACACACACACACACACACACACACACACACACACATGCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCATACACACACACACACACACACACACACACACACACATGCACA  650

seq1  CATACACATGCATATATATATATACATATATATGTATATATATATATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACATGCATATATATATATACATATATATGTATATATATATATATA  700

seq1  TATATATATATATATATATAAACTTGGATTCAACTTTTGTTCAAGAAAGT  750
      ||||||||||||||||||||||| ||||| || |||||  | ||||||  
seq2  TATATATATATATATATATAAACATGGATACATCTTTTTGTAAAGAAATG  750

seq1  AGATTCTTTTGAATAAAATAAAGGAAGTGTTTGAGATATGCATGTATTAT  800
      |||||||||||||||| ||||| |||||||||||||||||||||||||||
seq2  AGATTCTTTTGAATAATATAAATGAAGTGTTTGAGATATGCATGTATTAT  800

seq1  TGGGGATCT-GGGAGCATGTTAAAT-AAATAACAATAATGTGGCTATCTT  848
      ||||||||| ||||||||||||||| ||||||| |||||| |||||||||
seq2  TGGGGATCTGGGGAGCATGTTAAATAAAATAAC-ATAATGGGGCTATCTT  849

seq1  -GGTTGATAGCA-CCAAGATGAAACC-AACCATGTGGCTGACCACT-ATC  894
       ||||||||||| ||||||||||||| ||||||||||||||||||| |||
seq2  GGGTTGATAGCACCCAAGATGAAACCAAACCATGTGGCTGACCACTAATC  899

seq1  TTGACCTGTGGCCTTTACAAGAATCAA-GAAGCTAGGTCACTATATTTAC  943
      ||||||||||||||||||||||||||| ||||||| ||||||||||||||
seq2  TTGACCTGTGGCCTTTACAAGAATCAAGGAAGCTATGTCACTATATTTAC  949

seq1  T-AGTGTT-GTTAAGAAGGCAAAT-ATCATGTGAGTTGACC-TCAATCTT  989
      | |||||| |||||||| |||||| |||||||||||||||| ||||||||
seq2  TAAGTGTTGGTTAAGAAAGCAAATAATCATGTGAGTTGACCTTCAATCTT  999

seq1  GGTATACCA-GGCCTCC-AAAATGATG-TATTTTA-TTTTCCTTAGACTA  1035
      ||||||||| ||||||| ||||||||| ||||||| ||||||||||||||
seq2  GGTATACCAGGGCCTCCAAAAATGATGATATTTTATTTTTCCTTAGACTA  1049

seq1  AGGAGGTAACA--CCTCTAAGACACAC-TATAAGGTGATC-AAAAAATGA  1081
      |||  | ||||  | || || |  ||| |||| ||||||| |||||||||
seq2  AGGGAGGAACACTCTTCAAAAAACCACTTATATGGTGATCAAAAAAATGA  1099

seq1  GG-TTCCTATTCTTCC-TATGAACTGTA-TTTATGGTTTAAGGTTTATTT  1128
      || ||| ||||||||| ||  ||| ||| ||||||| ||||||   ||||
seq2  GGTTTCTTATTCTTCCTTAGTAACCGTATTTTATGG-TTAAGG-CCATTT  1147

seq1  TGA  1131
      |||
seq2  TGA  1150


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