BAC Information

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BAC

Clone NameB6Ng01-092M14
Chromosome4 (Build37)
Map Location 147,049,312 - 147,049,918
singlet/doubletsinglet
Overlap geneLOC100043100
Upstream geneMGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618
Downstream geneLOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092M14.bB6Ng01-092M14.g
ACCDH904449DH904450
length1,2351,052
definitionDH904449|Mus musculus domesticus DNA, BAC clone: B6Ng01-092M14, 5' end.DH904450|Mus musculus domesticus DNA, BAC clone: B6Ng01-092M14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatacaggagagaaaccttataaatgcaatgaatgcgacaaatgc
tttacccgaaaatcacatcttagtattcatcagagaattcatacaggaga
gaaactgtacaaatgcagtgaatgtgacaaatgctttactgacaaaggca
gtcttagagttcatcatagaattcatgcaggagagaaaccttacaaatgt
agtgaatgtgacaaatgctttactcacaaaggctctctgagagttcatca
tagaattcatgcaggagagaaaccttacaaatgtagtgaatgtgacaaat
gttttactgagaaaaacagtctgagaaggcatcagagaattcatacagga
gagaaaccttataaatgcaatgaatgcgacaaatgctttacccgaaaatc
acatcttagtattcatcagagaattcatacaggagagaaactgtacaaat
gcagtgaatgtgacaaatgctttacccaacaatgccatcttagtattcat
cagaaaattcattcaggagagaaccttacaaatgcaatgaatgcgacaaa
tgctttagtgacaaacacagtctgagaaggcatcagagaattcatacagg
agagacaccttacaaatgtaatgaatgtgacaaatgctttacctgaaaat
cacatcttagtattcatcagataattcatacaggagagaaaccttacaaa
tgtaatgaatgtgacaaatcctttactgaaaatggctgtctgagaattca
tcagagaattcatacaggagagaaaccttacaaatgtaatgaatgtgaca
aatgctttacctgaaaatcacatcttagtattcatcagataattcataca
gaagagaaaccttacaaatgtagtgaatgtgacaaatcctttactgaaaa
tggctgtctgagaattcatcagagaattcatacaggagagaaaccttaca
atgtagtgaatgtgacaaatgctttactaaaaaatccagtttgaggattc
atcagagattcatacaggagagaaaccttacaaatgtagtgaatgtgaca
aatgtttttattcaaatgcagtctgatattcatcagaagaatcatactgg
aaagaaaccttacatgtatgatgtgacaaagctttatctggaaaagtcat
ctgaaaagcatcgaactttacaggggaattctcaggatgagcaaggttgg
cgaatcatctgtgatccagaattcacttaaagaga
gaattctctgatgaatattaagataggaattttgggtaaagcatttgtta
cattcactacatttataaggattctctcctgtatgaattctctgatgaat
accaagatggaattttcgggaaaagcatttgtcacattcactgcatttgt
aaggtttctctcctgtatgaattctctgatgaatactaagattggattgt
tgggtaaagcatttgtcacattcactgcatttgtaaggtttctctcctgt
atgaattctctgatgaatactaagattggattgttgggtaaagcatttgc
cacattcactgcatttgtaaggtttctgtcctgtatgaattctctgatga
attctcagactgcttttttcagtaaagcatttgccacattcactgcattt
gtaaggtttctctcctgtatgaattctctgatgaattctcagactgcctt
ttccagtaaagcatttgtcacattcactgcatttgtaaggtttctctcct
gtatgaattctctgatgaatactaagattggattgttgggtaaagcattt
gtcacattcactgcatttgtaaggtttctctcctgtatgaattctctgat
gaatcctcagactgctttttttagtaaagcatttgtcacattcactgcat
ttgttaggtgtctctcctgtatgaattctctgatgcatagtaagattgaa
tttgtgtttaaaacatttgtcacattcactacatttgtaaattttctctt
ctgtatgaattccctgatgaatactaagatggatctgatgggtaaagcat
ttgtcacttttactactttcgtaaggtttctttccatgataaattctctg
ctgactttgtagtttttctctctgggtaggatatttgtgaaattcactac
atttgtaagggtccctgcatattgttttttttcacacgacttttatgttt
agaaacaaaaaccttctctaatctgcatttccggttgtgtttttttcttc
gcatgtattccctgattggaactaatggtagaaaaacaaatcttaactgt
tt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147049312_147049918
seq2: B6Ng01-092M14.g_518_1121

seq1  TTTTTCAGTAAAGCATTTGCCACATTCACTGCATTTGTAAGGTTTCTCTC  50
      |||| |||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTTTCCAGTAAAGCATTTGTCACATTCACTGCATTTGTAAGGTTTCTCTC  50

seq1  CTGTATGAATTCTCTGATGAATTCTCAGACTGCTTTTTTCAGTAAAGCAT  100
      |||||||||||||||||||||| || ||| ||  || ||  |||||||||
seq2  CTGTATGAATTCTCTGATGAATACTAAGATTGGATTGTTGGGTAAAGCAT  100

seq1  TTGCCACATTCACTGCATTTGTAAGGTTTCTCTCCTGTATGAATTCTCTG  150
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACATTCACTGCATTTGTAAGGTTTCTCTCCTGTATGAATTCTCTG  150

seq1  ATGAATTCTCAGACTGGTTTTATCAGTAAAGCATTTGCCACATTCACTGC  200
      |||||| ||||||||| |||| | ||||||||||||| ||||||||||||
seq2  ATGAATCCTCAGACTGCTTTTTTTAGTAAAGCATTTGTCACATTCACTGC  200

seq1  ATTTGTAAGGTTTCTCTCCTTTATGAATTCTCTGATGCATAGTAAGATTG  250
      |||||| |||| |||||||| |||||||||||||||||||||||||||||
seq2  ATTTGTTAGGTGTCTCTCCTGTATGAATTCTCTGATGCATAGTAAGATTG  250

seq1  AATTTGTTTTTAAAACATTTGTCACATTCACTACATTTGTAAATTTTCTC  300
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTGTTTAAAACATTTGTCACATTCACTACATTTGTAAATTTTCTC  300

seq1  TTCTGTATGAATTCCCTGATGAATACTAAGATGGATCTGATGGGTAAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTATGAATTCCCTGATGAATACTAAGATGGATCTGATGGGTAAAGC  350

seq1  ATTTGTCACTTTTACTACTTTCGTAAGGTTTCTTTCCATGATAAATTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCACTTTTACTACTTTCGTAAGGTTTCTTTCCATGATAAATTCTC  400

seq1  TGCTGACTTTGTAGTTTTTCTCTCTGGGTAAGATATTTGTGAAATTCACT  450
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGCTGACTTTGTAGTTTTTCTCTCTGGGTAGGATATTTGTGAAATTCACT  450

seq1  ACATTTGTAAGGGTTCCCTGCAATATTGTCTTTTTTCACCATGAC-TTTA  499
      ||||||||||||| ||||||| ||||||| |||||||| || ||| ||||
seq2  ACATTTGTAAGGG-TCCCTGC-ATATTGTTTTTTTTCA-CACGACTTTTA  497

seq1  TGTTTAGAAACAAAAATCTTGTCTAATTCTGCATTT-CGGTTGTG-TTTT  547
      |||||||||||||||| ||| ||||| ||||||||| |||||||| ||||
seq2  TGTTTAGAAACAAAAACCTTCTCTAA-TCTGCATTTCCGGTTGTGTTTTT  546

seq1  TTCTTCTGCATGTTAATTCCTTGATTGAGACTAATGGTAG-AAAACAAAC  596
      |||||| ||||||  ||||| ||||||  ||||||||||| |||||||| 
seq2  TTCTTC-GCATGT--ATTCCCTGATTGGAACTAATGGTAGAAAAACAAAT  593

seq1  TTAAACTGTTT  607
       | ||||||||
seq2  CTTAACTGTTT  604