BAC Information

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BAC

Clone NameB6Ng01-093D21
Chromosome4 (Build37)
Map Location 92,831,442 - 92,832,587
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC68280, LOC620269
Downstream geneLOC384125, Tusc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093D21.bB6Ng01-093D21.g
ACCDH904782DH904783
length1,1231,158
definitionDH904782|Mus musculus domesticus DNA, BAC clone: B6Ng01-093D21, 5' end.DH904783|Mus musculus domesticus DNA, BAC clone: B6Ng01-093D21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ttatctgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgatggtgtcttttgctttgcaaaagctttgcaatttta
tgaggtcccatttatcgattcttgatcttacaacacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatcttcaagggttttcgttac
tttctcctctataagtttcagtgtctctagttttaagtggagttccttaa
tccacttagatttgaccttagtacaaggagataggaatggatcaattcgc
aaaattctacatgataaccgccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctccctcgtcaaagatcaagt
gaccatagatgtgtggattcatctctgggtcttcaattctgttccattgg
tctacttgtctgttgctatcccagtaccatgcagtttttatcacaattgc
tctgtagtaaatctttaggtcaggcatggtgattccaccacaggttcttt
tatccttgagaagagtttttgctatcctagattttttgttattccagatg
aatttgcagattgccctttctaatatgttgaagaattgagttggaatttt
gatggggattgcattgaaactgtagattgcttttggcaagatggccattt
ttacaatgttgattctgccaatccatgagcatgggagatctttccatctt
cttgagatcttctttaatttcttcttagagatttgaagttcttatcatac
agatctttcacttcctagttagagtcacgccaacgtatttatatatttgt
gactattgagaatggtgttgttccctaatttctttctcagcctgttatcc
tatgtgtacagaaggccattgactgtttgaggtatttaaatccagcttct
ctaatgagctgtatcagcctaggatctcccggtggaaatttaggtccttt
aaataacttacaataccatccgc
gaattctcagttaattttgtcaaataaggattcattcacagtcatctatt
ttatagtttgtcccattgtggcagtgctaagaggaaactgaaagtagaag
catggggtaatttacccatagcctttcttcttttatctcatcttcaaata
tgtccaaaaacagtaactcatattatttttctcagtttatagaattagga
agatagttaagattattaaagatatcactcaaaatttcaaatttggggac
actgcgatggattagcaggtaatggccaaacctgacaataagaattcaat
ttccaggactcacatggaaagtcactcataaggagagaattgactagtgc
aagcctttctctaacttcaatatgaattctgtgacaaacactcaccacgc
taaatagacatataaagcataaaaataaaacatttttaaaaaataggcat
tttatatttgtgtttttaacattatacagaaagactatgtatgctttccc
atgatatcacgttttagagatctggtaatgtctagcaatagcttgtttaa
gagaaacaaaggcttccatgattgatttgactacatagagacataagagt
ctaaacagagatacccatgcataatatagaaagtctcagtttcagtaaga
tagagtgtgctgtgttaaagaaaaaaaaatcagtaaaagtttatcaatac
tactgattaaagctattctcgcttaagcaatttccagttatttaatgatt
taaagatactgtctaacactattgtgaatgctgtggaaaaatgaatgaac
ttcccttcaaatagccaacaggttacatttaagtccaattctgaaatgcc
ataattagggaaaattgcaggagaatgagttttatttgggacttacagtt
tcagggaactaagtgtccatcatggggaggaaagcatgatagtaggaatc
atatgtggcagcaggagcaagagactgaactcacacttctcaattcaaag
cagggaagacaatgagagttaaacagggagaatttttacctaatgctgtt
ccacgaatggtgttaaggaacctgaaccactcaaacagccacatcaactg
ggaaattaaggtgtagaaatatggatctcctcaatttgaaggacgagaga
aaagatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_92831442_92832587
seq2: B6Ng01-093D21.g_71_1228 (reverse)

seq1  GTATC--TTCTCTCGTTCCTTCAAAATTGAAGAAAATCATA-TTCTACAC  47
      |||||  |||||||| |||||| ||||||| || |  |||| ||||||||
seq2  GTATCTTTTCTCTCG-TCCTTC-AAATTGAGGAGATCCATATTTCTACAC  48

seq1  TTGA--CTCCCAGTTGATGGTGCTGTTTTGAGTGGTTCAGG-TACTTAAC  94
       | |   ||||||||||||  |||| ||||||||||||||| | ||||||
seq2  CTTAATTTCCCAGTTGATGTGGCTG-TTTGAGTGGTTCAGGTTCCTTAAC  97

seq1  A-CATTCGTGGAACAAGCATTAGGTTAAAATTCT-CCTGTTT-ACTCTCA  141
      | |||||||||||| |||||||||| |||||||| ||||||| |||||||
seq2  ACCATTCGTGGAAC-AGCATTAGGTAAAAATTCTCCCTGTTTAACTCTCA  146

seq1  TTGTCTTTCCTGCTTTGAATTGAG-AGTGTGAGTTCAGTCTCTTGCTCCT  190
      ||||||| |||||||||||||||| |||||||||||||||||||||||||
seq2  TTGTCTTCCCTGCTTTGAATTGAGAAGTGTGAGTTCAGTCTCTTGCTCCT  196

seq1  GCTGCCACATATGATTCTTACTATCCTGCTTTCCT-CCCATGATGGACAC  239
      ||||||||||||||||| ||||||| ||||||||| ||||||||||||||
seq2  GCTGCCACATATGATTCCTACTATCATGCTTTCCTCCCCATGATGGACAC  246

seq1  TTAGTTCCCTGAAACTGTAAGT-CCAAAT-AAACTCATTCTCCTGCAATT  287
      |||||||||||||||||||||| |||||| ||||||||||||||||||||
seq2  TTAGTTCCCTGAAACTGTAAGTCCCAAATAAAACTCATTCTCCTGCAATT  296

seq1  TTCCCTAATTATGGCATTTCAGTATTGGACTTAAATGTAAACTGTTTGCT  337
      |||||||||||||||||||||| ||||||||||||||||| ||||| |||
seq2  TTCCCTAATTATGGCATTTCAGAATTGGACTTAAATGTAACCTGTTGGCT  346

seq1  ATTTG-AGGGAAGTTCATTCATTTTTCCACAGCATTCACAATAGTGTTAG  386
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAGGGAAGTTCATTCATTTTTCCACAGCATTCACAATAGTGTTAG  396

seq1  ACAGTATCTTTAAATCATTAAATAACTGG-AATTGCTTAAGCGAGAATAG  435
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ACAGTATCTTTAAATCATTAAATAACTGGAAATTGCTTAAGCGAGAATAG  446

seq1  CTTTAATCAGTAGTATTGATAAACTTTTACTGA-TTTTTTTTCTTTAACA  484
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTTTAATCAGTAGTATTGATAAACTTTTACTGATTTTTTTTTCTTTAACA  496

seq1  CAGCACACTCTATCTTACTGAAACTGAGACTTTCTATATTATGCATGGGT  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACACTCTATCTTACTGAAACTGAGACTTTCTATATTATGCATGGGT  546

seq1  ATCTCTGTTTAGACTCTTATGTCTCTATGTAGTCAAATCAATCATGGAAG  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGTTTAGACTCTTATGTCTCTATGTAGTCAAATCAATCATGGAAG  596

seq1  CCTTTGTTTCTCTTAAACAAGCTATTGCTAGACATTACCAGATCTCTAAA  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTTTCTCTTAAACAAGCTATTGCTAGACATTACCAGATCTCTAAA  646

seq1  ACGTGATATCATGGGAAAGCATACATAGTCTTTCTGTATAATGTTAAAAA  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGATATCATGGGAAAGCATACATAGTCTTTCTGTATAATGTTAAAAA  696

seq1  CACAAATATAAAATGCCTATTTTTTAAAAATGTTTTATTTTTATGCTTTA  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATATAAAATGCCTATTTTTTAAAAATGTTTTATTTTTATGCTTTA  746

seq1  TATGTCTATTTAGCGTGGTGAGTGTTTGTCACAGAATTCATATTGAAGTT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTATTTAGCGTGGTGAGTGTTTGTCACAGAATTCATATTGAAGTT  796

seq1  AGAGAAAGGCTTGCACTAGTCAATTCTCTCCTTATGAGTGACTTTCCATG  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGGCTTGCACTAGTCAATTCTCTCCTTATGAGTGACTTTCCATG  846

seq1  TGAGTCCTGGAAATTGAATTCTTATTGTCAGGTTTGGCCATTACCTGCTA  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCCTGGAAATTGAATTCTTATTGTCAGGTTTGGCCATTACCTGCTA  896

seq1  ATCCATCGCAGTGTCCCCAAATTTGAAATTTTGAGTGATATCTTTAATAA  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCGCAGTGTCCCCAAATTTGAAATTTTGAGTGATATCTTTAATAA  946

seq1  TCTTAACTATCTTCCTAATTCTATAAACTGAGAAAAATAATATGAGTTAC  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACTATCTTCCTAATTCTATAAACTGAGAAAAATAATATGAGTTAC  996

seq1  TGTTTTTGGACATATTTGAAGATGAGATAAAAGAAGAAAGGCTATGGGTA  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTGGACATATTTGAAGATGAGATAAAAGAAGAAAGGCTATGGGTA  1046

seq1  AATTACCCCATGCTTCTACTTTCAGTTTCCTCTTAGCACTGCCACAATGG  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACCCCATGCTTCTACTTTCAGTTTCCTCTTAGCACTGCCACAATGG  1096

seq1  GACAAACTATAAAATAGATGACTGTGAATGAATCCTTATTTGACAAAATT  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACTATAAAATAGATGACTGTGAATGAATCCTTATTTGACAAAATT  1146

seq1  AACTGAGAATTC  1146
      ||||||||||||
seq2  AACTGAGAATTC  1158