BAC Information

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BAC

Clone NameB6Ng01-093F14
Chromosome4 (Build37)
Map Location 37,603,352 - 37,604,580
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042132, LOC545600, LOC621458
Downstream geneLOC277771, LOC100039448
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093F14.bB6Ng01-093F14.g
ACCDH904863DH904864
length1,2101,195
definitionDH904863|Mus musculus domesticus DNA, BAC clone: B6Ng01-093F14, 5' end.DH904864|Mus musculus domesticus DNA, BAC clone: B6Ng01-093F14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctacagataaatttcaaatggccgagaaacacttagaaagagg
ttcaacattctttgtcatcagggaaattcagatcaaaatgaatcagagat
ttttaccttacagatatcagcatggtttaagataaaaaactcaagggata
gcacatagtagcaagggtatggagcaagaggaacactggtccattgctgg
tgggagtgtaaacttgtacaacaaccctaaaaatcaattttgcatatttc
tcaaaaaactgagaatatttctacctcaaggaccagctatattactcctg
ggcatatacccaaaaaaatgttccaccatctaacaaggacacttgctcaa
ctatcttcatagcatctttacttgtaatagtatgaaactggaaaaacaca
aatacacctaacttgagaacagataaagaaaatgtggtttgtttaaacaa
tggggtactaccaagctattaaaaacaagggcatcatgaatgttgcaggc
aaatgaatggaactaaataaatatcctgggtgagataccacagacccaaa
gggtatgcatggtatgtaattattcataagtggatattatccataaaata
cagaattttcatgctccaatccatagacccaaagaagtcaaacagcaaag
aaagcccaagggaggatgcttttatctctttgagaaggggaaataaaata
gatgtaggaggtacatggatcaaggatacttgatgggaggcaggatgagg
agagaaagtaggggttcaaagaatgaagcatagggagagcagagcaaagg
aaaaaattgaggtgggttatgggtgtgtttctggaatatgacaaagatct
aggatggtggtaaccccaagagagtctatggagatgactcaactgggact
ctaagcagtggagataatggcgactaaagcgtccaccttctgtagctgag
agtactcccagtggaggtataatgacagcatttaccaacaaaactttgac
ccaaatgtgtctgctatatgacttaagggacaataacgaactggccaact
catactcatctcatggatagaccaagcctgatgctattatgatattcaat
aggcttgcgacggagcctactatactgtacctgtaagacttcttcaacgg
attggagatctcgaaacctcgctaccttacgagggtggagagccttcaca
agaagttgaa
gaattcactatgtagtttgtgctggacacagttttcactccaaagtacta
aaataaacaccactctatatttattttgccatttttataaaccaccaatt
taatagcttgaagtaatatataatattactcattcagtaaaataattgta
aaagaactgattcatataatatcttaggtgttggttgatagaaacatctg
gggtacaaacatttaattttcatctgctttatgtaaaaagacagtattat
cagctcccatactttaacaagatgaagcttatgaatcacagaaaatggcc
tagggtttggatgataatgtaatgggcttgcttgatctcttttagactgt
caatgtttgagcattgcaaaaggatgaatattgtttataacatataatta
aaaactatatttctcactggcttttacttatgtgaaaagtactagtatga
ttattacttaacaaaaaatagcttcttatcattaagaaaaattcaattat
tctgatatagatatactctagaatatgaatccttgaatgaaatgagaaag
catgcatataaaaccatgtcagttttttaatatgttgactttgtttcaaa
accaattaatggttttattaaagtgatttcagctaattatacaataacta
ggccatccatttaaaaagtcattatacctcaaatattagaaattattaat
tattttatatacactcgctgtccaatttagttaatttacatgcctatttg
actcactaatatacttgacatattgtagttgacgttttgtataaaatcaa
acttaaagtcagttgaatcaaagaatgcattattatcagaaagaaatgtt
tattcaaaatctaggatatgaatcattaagaaatttgtttcatattttta
atttcttaagtatataatttcaaatacgaaagttatgacctgaacacaat
aagcacatctctgatacatagtgaagtactttacgtttatattggttcta
tatacatgtgtggatgtttgtctagtatatttgtagcacattttgtatct
ttgaatgttatacatttgaacgaattaaggcaaagatgaaatgaaattaa
ggaatggtcctgaaaacaaatttaattttagaatgaagagttctatgtat
aactgacttctcgaatccgttcaggaaatgtgcagcatgtaactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_37603352_37604580
seq2: B6Ng01-093F14.g_70_1264

seq1  GAATTCACTATGTAGTTTGTGCTGGACACAGTTTTCACTCCAAAGTACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTAGTTTGTGCTGGACACAGTTTTCACTCCAAAGTACTA  50

seq1  AAATAAACACCACTCTATATTTATTTTGCCATTTTTATAAACCACCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACACCACTCTATATTTATTTTGCCATTTTTATAAACCACCAATT  100

seq1  TAATAGCTTGAAGTAATATATAATATTACTCATTCAGTAAAATAATTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCTTGAAGTAATATATAATATTACTCATTCAGTAAAATAATTGTA  150

seq1  AAAGAACTGATTCATATAATATCTTAGGTGTTGGTTGATAGAAACATCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACTGATTCATATAATATCTTAGGTGTTGGTTGATAGAAACATCTG  200

seq1  GGGTACAAACATTTAATTTTCATCTGCTTTATGTAAAAAGACAGTATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACAAACATTTAATTTTCATCTGCTTTATGTAAAAAGACAGTATTAT  250

seq1  CAGCTCCCATACTTTAACAAGATGAAGCTTATGAATCACAGAAAATGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCCATACTTTAACAAGATGAAGCTTATGAATCACAGAAAATGGCC  300

seq1  TAGGGTTTGGATGATAATGTAATGGGCTTGCTTGATCTCTTTTAGACTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTTTGGATGATAATGTAATGGGCTTGCTTGATCTCTTTTAGACTGT  350

seq1  CAATGTTTGAGCATTGCAAAAGGATGAATATTGTTTATAACATATAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTTGAGCATTGCAAAAGGATGAATATTGTTTATAACATATAATTA  400

seq1  AAAACTATATTTCTCACTGGCTTTTACTTATGTGAAAAGTACTAGTATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTATATTTCTCACTGGCTTTTACTTATGTGAAAAGTACTAGTATGA  450

seq1  TTATTACTTAACAAAAAATAGCTTCTTATCATTAAGAAAAATTCAATTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACTTAACAAAAAATAGCTTCTTATCATTAAGAAAAATTCAATTAT  500

seq1  TCTGATATAGATATACTCTAGAATATGAATCCTTGAATGAAATGAGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATATAGATATACTCTAGAATATGAATCCTTGAATGAAATGAGAAAG  550

seq1  CATGCATATAAAACCATGTCAGTTTTTTAATATGTTGACTTTGTTTCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATATAAAACCATGTCAGTTTTTTAATATGTTGACTTTGTTTCAAA  600

seq1  ACCAATTAATGGTTTTATTAAAGTGATTTCAGCTAATTATACAATAACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTAATGGTTTTATTAAAGTGATTTCAGCTAATTATACAATAACTA  650

seq1  GGCCATCCATTTAAAAAGTCATTATACCTCAAATATTAGAAATTATTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATCCATTTAAAAAGTCATTATACCTCAAATATTAGAAATTATTAAT  700

seq1  TATTTTATATACACTCGCTGTCCAATTTAGTTAATTTACATGCCTATTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATATACACTCGCTGTCCAATTTAGTTAATTTACATGCCTATTTG  750

seq1  ACTCACTAATATACTTGACATATTGTAGTTGACGTTTTGTATAAAATCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTAATATACTTGACATATTGTAGTTGACGTTTTGTATAAAATCAA  800

seq1  ACTTAAAGTCAGTTGAATCAAAGAATGCATTATTATCAGAAAGAAATGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAAGTCAGTTGAATCAAAGAATGCATTATTATCAGAAAGAAATGTT  850

seq1  TATTCAAAATCTAGGATATGAATCATTAAGAAAAATTTGTTTCATATTTT  900
      ||||||||||||||||||||||||||||||  ||||||||||||||||||
seq2  TATTCAAAATCTAGGATATGAATCATTAAG--AAATTTGTTTCATATTTT  898

seq1  TAATTTCTTAAGTATATAATTTCAAATACGAAAGTTATGACCTGAACACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCTTAAGTATATAATTTCAAATACGAAAGTTATGACCTGAACACA  948

seq1  ATAAGCACATTCTCTGAATACATAGTGAAGTACTTTACGTTTATATTTGG  1000
      ||||||||| |||||| |||||||||||||||||||||||||||||| | 
seq2  ATAAGCACA-TCTCTG-ATACATAGTGAAGTACTTTACGTTTATATTGGT  996

seq1  TCTCTAATATACATGTGTGGATGTTTGTCTAAGTTATATTTTGTAGCACA  1050
      |||   |||||||||||||||||||||||||   |||| |||||||||||
seq2  TCT---ATATACATGTGTGGATGTTTGTCTA--GTATA-TTTGTAGCACA  1040

seq1  TTTTGTATCTTTGTATGTTATTAACATTTGAAACAGATATATGCAAAGAT  1100
      ||||||||||||| |||||||  ||||||| |||  ||  | ||||||||
seq2  TTTTGTATCTTTGAATGTTAT--ACATTTG-AACGAATTAAGGCAAAGAT  1087

seq1  GAGAATGATATTTAGGATAGTTCTTGAAAAACAAATATTAATTTTAGAAT  1150
      || ||||| ||| ||||  | || || ||||||||| |||||||||||||
seq2  GA-AATGAAATTAAGGAATGGTCCTG-AAAACAAAT-TTAATTTTAGAAT  1134

seq1  GAAGAGTTCTTAATTGTATTAACATAATTTTCTTTCAAAATACCCTTTCC  1200
      ||||||||||    |||| ||||  | || ||      |||  || ||| 
seq2  GAAGAGTTCT---ATGTA-TAACTGACTTCTC-----GAAT--CCGTTC-  1172

seq1  CAAAGAAAATTGTGCCAGCTATGTAACTC  1229
         || ||| |||| |||| |||||||||
seq2  ---AGGAAA-TGTG-CAGC-ATGTAACTC  1195