BAC Information

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BAC

Clone NameB6Ng01-093N18
Chromosome4 (Build37)
Map Location 58,916,292 - 58,917,329
singlet/doubletsinglet
Overlap geneAI314180
Upstream geneD630039A03Rik, Txn1, Txndc8, Svep1, Musk, Edg2, LOC675306, LOC433711, Olfr267
Downstream geneLOC100041581, Ltb4dh, 2010203O07Rik, Gng10, AI481877, LOC433712, Ugcg, LOC100041535, LOC634731, LOC666719, Rod1, Hsdl2, E130308A19Rik, LOC100041592, 1110054O05Rik, Snx30
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093N18.bB6Ng01-093N18.g
ACCDH905230DH905231
length1,0321,202
definitionDH905230|Mus musculus domesticus DNA, BAC clone: B6Ng01-093N18, 5' end.DH905231|Mus musculus domesticus DNA, BAC clone: B6Ng01-093N18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtactagtgaatacttggggtttggtgtcaccagtccaaaagt
ctactgtgtgcctgtctttactataactcttagactaatttaactattat
tttatgacttttttgtatgtatactgctagttacagtatataatggctaa
ttcatttaagtggaattttgagggctgaaatgttttataaatcagaattc
aacttcagaataaattttagtttatttttgctgtttcttatctttttccc
tgtggtgtgtagaggaataaaaattgggaggttgaaagacttgtttagta
gagcaatgagggcattgcttattgcatcctagattctttaattgttttgg
aacccatgagcaatgtattaatgcttttatactatactgaaggcaagcag
tcctaaacacaagtgctaggattgaaattgtgactttttagacaggcatg
atggtgcatgcctccctgtcctcgggaggcagacacaggaggatcaccac
aactctgaggccgtcctggactcgaattccagggtagctagggttatagt
gtgctatactgacttaataaacaaaacacaagcaaacaaacattttagaa
attttcacatcgaaatgagcaagtaattaactgcttttggtggatagtaa
ctatcctatgttggacttttatgaattcttatgtagtatctccctcaagc
ttgcttttgtaagccaaagtgatccttctgctcactatcttattaaaatt
aatttctacctggttgcctgccagctgcgggttctgaggagaaaggccat
tttagaggagggagtgtttgtgaacttaagagtgtttgtttattaggaat
ctggcacttaactcactgcatcttagaaagttgatgaggactcttgttaa
tcatctggtccagctatcaagctgccttcatgatttctttgctttcctgt
tgtatgtgtgaagagtaaggagtgaagcagtaggaattatcttgtagcag
cttgtaggtaacaggaagggggatccttctta
gaattctccactaaacccatctggtcttgggctttctttggttgggagac
tattaatgactgtttctatttccttaggggttatgggactgtttagatgg
tttagatctgatcctgtcttaactttggcacctggtatgtgtgtagaaaa
ttgtccatttcatccagattttccaataagcttttatagtaggatctgat
gattttttgaatttccacagtttctgttgttatagacatttttaatagac
aattttcatttttaattttattagtttggatactgtctctgtgccctctg
gttaatctggctaagggtttatctatttttgttgattttctcaaagaagc
aactcctggctttgttgattctttgtatagttctttttgtttctatttgg
ttgatttcagccctgagtttgattatttcctgccgtctactcttcttggg
tgtatttacttcttttttgttctagagctttcaggtgtgctgtcaaatat
ctagtgtatgctctctccagtttctttttggagacacttagaattatgag
ttttcctcttagctctgctttcattgtgtcccataagtctttggtatgat
gtgctgtcattttcaataaattctaaaaactttttaaatttctttatatc
ttccttgatcaagttatcactgagtagtttgttgtttcagctttcatgtg
tatgtgtgttttctgttgtttttgttggaatataagaccggccttagtcc
atggtgatctgataatttgcatgggattatttcaatcttcttgtatctgt
tgaggcctgttttgtgaccattatatggtcaattttggagaagtaccatg
agatactgagaagaacgtacattcttttgattagatgaaatgtctataga
tatctgttaaatccatttgatcatacttctgtagttcactgtgttctgtt
tagttgtgtttcactgatgagagtgagctgttgacgcctgcactatttat
cggtgagtgcaatgtgggcctggagttaaataagtttcttgtgatttccc
tgcttggaccagaggtcaatgaagatctcttggaagtccttgaaagatga
agtctatctttagaaccttgggtaagtgcattatcacttaaaggcactca
gattgttttcggacatttcagtgacgcatttttacgacgcgttacgacgt
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_58916292_58917329
seq2: B6Ng01-093N18.b_45_1076 (reverse)

seq1  TTAGAAGGATCCCCCTTCCTGCTCACCT--CAGCTGCCTACAAGATTATT  48
      | ||||||||||||||||||| | ||||   ||||| ||||||||| |||
seq2  TAAGAAGGATCCCCCTTCCTG-TTACCTACAAGCTG-CTACAAGATAATT  48

seq1  TCCTTACTGCCTTCAACTCCTTAACTCTTCACACATACACACAGGAAAGC  98
        | ||||| |||| ||||||| |||||||||||||||| ||||||||||
seq2  --CCTACTG-CTTC-ACTCCTT-ACTCTTCACACATACA-ACAGGAAAGC  92

seq1  AAAGAAATCATGAAGGCAGCTTGATAGCTGGACCAGATGATTTAACAAGA  148
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAAGAAATCATGAAGGCAGCTTGATAGCTGGACCAGATGA-TTAACAAGA  141

seq1  GTCCTCATCAAC-TTCTAAGATGCAGTGAGTTAAGTGCCAGATTCCTAAT  197
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTCCTCATCAACTTTCTAAGATGCAGTGAGTTAAGTGCCAGATTCCTAAT  191

seq1  AAACAAACACTCTTAAGTTCACAAACACTCCCTCCTCTAAAATGGCCTTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACACTCTTAAGTTCACAAACACTCCCTCCTCTAAAATGGCCTTT  241

seq1  CTCCTCAGAACCCGCAGCTGGCAGGCAACCAGGTAGAAATTAATTTTAAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCAGAACCCGCAGCTGGCAGGCAACCAGGTAGAAATTAATTTTAAT  291

seq1  AAGATAGTGAGCAGAAGGATCACTTTGGCTTACAAAAGCAAGCTTGAGGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAGTGAGCAGAAGGATCACTTTGGCTTACAAAAGCAAGCTTGAGGG  341

seq1  AGATACTACATAAGAATTCATAAAAGTCCAACATAGGATAGTTACTATCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACTACATAAGAATTCATAAAAGTCCAACATAGGATAGTTACTATCC  391

seq1  ACCAAAAGCAGTTAATTACTTGCTCATTTCGATGTGAAAATTTCTAAAAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAGCAGTTAATTACTTGCTCATTTCGATGTGAAAATTTCTAAAAT  441

seq1  GTTTGTTTGCTTGTGTTTTGTTTATTAAGTCAGTATAGCACACTATAACC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGCTTGTGTTTTGTTTATTAAGTCAGTATAGCACACTATAACC  491

seq1  CTAGCTACCCTGGAATTCGAGTCCAGGACGGCCTCAGAGTTGTGGTGATC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTACCCTGGAATTCGAGTCCAGGACGGCCTCAGAGTTGTGGTGATC  541

seq1  CTCCTGTGTCTGCCTCCCGAGGACAGGGAGGCATGCACCATCATGCCTGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTGTCTGCCTCCCGAGGACAGGGAGGCATGCACCATCATGCCTGT  591

seq1  CTAAAAAGTCACAATTTCAATCCTAGCACTTGTGTTTAGGACTGCTTGCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAAGTCACAATTTCAATCCTAGCACTTGTGTTTAGGACTGCTTGCC  641

seq1  TTCAGTATAGTATAAAAGCATTAATACATTGCTCATGGGTTCCAAAACAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTATAGTATAAAAGCATTAATACATTGCTCATGGGTTCCAAAACAA  691

seq1  TTAAAGAATCTAGGATGCAATAAGCAATGCCCTCATTGCTCTACTAAACA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAATCTAGGATGCAATAAGCAATGCCCTCATTGCTCTACTAAACA  741

seq1  AGTCTTTCAACCTCCCAATTTTTATTCCTCTACACACCACAGGGAAAAAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTCAACCTCCCAATTTTTATTCCTCTACACACCACAGGGAAAAAG  791

seq1  ATAAGAAACAGCAAAAATAAACTAAAATTTATTCTGAAGTTGAATTCTGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAACAGCAAAAATAAACTAAAATTTATTCTGAAGTTGAATTCTGA  841

seq1  TTTATAAAACATTTCAGCCCTCAAAATTCCACTTAAATGAATTAGCCATT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAAACATTTCAGCCCTCAAAATTCCACTTAAATGAATTAGCCATT  891

seq1  ATATACTGTAACTAGCAGTATACATACAAAAAAGTCATAAAATAATAGTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTGTAACTAGCAGTATACATACAAAAAAGTCATAAAATAATAGTT  941

seq1  AAATTAGTCTAAGAGTTATAGTAAAGACAGGCACACAGTAGACTTTTGGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGTCTAAGAGTTATAGTAAAGACAGGCACACAGTAGACTTTTGGA  991

seq1  CTGGTGACACCAAACCCCAAGTATTCACTAGTACTGAATTC  1038
      |||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGACACCAAACCCCAAGTATTCACTAGTACTGAATTC  1032