BAC Information

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BAC

Clone NameB6Ng01-093P06
Chromosome4 (Build37)
Map Location 24,880,536 - 24,881,702
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC664973, F730047E07Rik, Klhl32, 1110007M04Rik
Downstream geneC230012O17Rik, Gpr63, Fhl5, 1810074P20Rik, Prdx6-rs2, LOC665019, LOC625732, Fut9, LOC100040780, Hn1-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093P06.bB6Ng01-093P06.g
ACCDH905299DH905300
length1,1571,231
definitionDH905299|Mus musculus domesticus DNA, BAC clone: B6Ng01-093P06, 5' end.DH905300|Mus musculus domesticus DNA, BAC clone: B6Ng01-093P06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagggaagctgagatggggttggtagcacagtcacctcttgaag
taaaggcaggaagagcttaaaactatatgctacacttataaacttgatag
aggatttagttcatctaatcaccaatactctctttttaaaaaattctctc
aaaatttattattatttattatccccatattttttccatttccatgaaga
acaattagggcaattagggctggccaaccagggctgagaaatcagcagtg
attaagaagagaccagtatcaatgacttgaattctttctggaatatttcc
ttagggtcagcacagagaagctatctatggtcgagtggatcaaaggcaca
tcacatacaggcagctgaacttggtaatgtgtaagaggcacccaggtgga
acttgttttgaaggcataaaggaatcagaagactagctgaggcttggtgc
tatgtggcagggatagagaccataaagagggcccagaagagactgttagt
gaaggtgcaccccagttgctatgaagatctgggcattttgtagatgctag
caccatgaaatgaccaccaaggagagaagcagctgtagagtggagctggc
ctgactctgtgagataagctgtgtgtatttcagatggtaaagctccactt
ggagctgttcaaaggccctgtggcacccagaagatggtgagtgaatccca
aacatttgatactgagttatttataatgatggaatttggtcttgtttgtt
cagattgtgactgtgtcctaattcttcttgcattaaaaaaaaaactaact
ttttaaaaaattttactagagtccatagttgagagattttagatgtatta
aagagagtaaaattttaactactggggattttaaactttggaatatgatt
tatattgtgatattgatatgacagtttaaagatacaagcaagaaaaagtt
atgatctaatagtgatgtctttatgtgtcaagaagataaaagttcaaatg
tactggataggtttatgtcaacttgaaacagctacatcatttcagagagg
aaatttcatctggggagtatgcagccatcatctaagctgtgggaatcttt
atgatataaatagttaacaatcatatgcttcttcttgtacatgacttact
aaattta
gaattcagtaggaactcagtaaaaatgttacctattcagtaacattcaaa
tttacttagagacagtgaaactaattaggcattacaaagaacggagctag
aatagctcagggttagtctgcagagtggttacttaggacagtaggcagtc
tcacccaaacaagagaatacacaatggcctagtgaataggtagatttacc
atgaaagagttagggaatcccactgagacaggaatcttcactatagccag
gtatagcaggctacattgcatattggaagcaagttggtgaattcttctga
caaatggagattccccacagatactttaaagaacagccaagttacactca
tgcaagaatttaatttatcaaggcctcgaaagagggggtttgtggtattg
cattattcatcagaaggtctgctagagcagaaccccctggtgctagcctt
cacaaggctcaaaggagtagcacaaattgtgactagggtgtgaaatcctt
acctgtcattagctgaccctaggcaggactgttttatctttattgtaaat
attacctggttcctgtaagtccttttgaagtcattcctttgttttgtgtc
agataacttcaatgtactttgcctactgtgacatcctacccctttgtttt
ctgtattatataagactggtgttgactttgtgacaatacactcagattcc
acacactctctcttgtcgtttctgttatcattcattgactccttgcccac
ctgcaactagagacccgttccatgcagataggagacccaaaaaaggagtt
agtctacagcaaggatggatgataatttcatccccaaatatgtcctcaat
tataactttttatggcacagtagtataccattgtgtaaatgtaccacatt
ttctgtatccattcctctgttgagggacatctgggatcttccagctctgg
ctatataaataaggctgctttgaacataatggagcaagtgtccttataca
cctagggagcatcttcttgggtacactcaggagtagtatatctgggtccc
tcagtagtacctatgtccagtttctggagacacagtcatactgatttttc
agagtgggttggtaccagcttaaccagtaatggagggaatgtttcccatt
tttccatcttcacacgcactagcgcatctggatttgtaccttcgggccaa
ctctgacagctagagtgagtgagtgagaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_24880536_24881702
seq2: B6Ng01-093P06.b_46_1202

seq1  GAATTCAAGGGAAGCTGAGATGGGGTTGGTAGCACAGTCACCTCTTGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGGAAGCTGAGATGGGGTTGGTAGCACAGTCACCTCTTGAAG  50

seq1  TAAAGGCAGGAAGAGCTTAAAACTATATGCTACACTTATAAACTTGATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCAGGAAGAGCTTAAAACTATATGCTACACTTATAAACTTGATAG  100

seq1  AGGATTTAGTTCATCTAATCACCAATACTCTCTTTTTAAAAAATTCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTAGTTCATCTAATCACCAATACTCTCTTTTTAAAAAATTCTCTC  150

seq1  AAAATTTATTATTATTTATTATCCCCATATTTTTTCCATTTCCATGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTATTATTATTTATTATCCCCATATTTTTTCCATTTCCATGAAGA  200

seq1  ACAATTAGGGCAATTAGGGCTGGCCAACCAGGGCTGAGAAATCAGCAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTAGGGCAATTAGGGCTGGCCAACCAGGGCTGAGAAATCAGCAGTG  250

seq1  ATTAAGAAGAGACCAGTATCAATGACTTGAATTCTTTCTGGAATATTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAAGAGACCAGTATCAATGACTTGAATTCTTTCTGGAATATTTCC  300

seq1  TTAGGGTCAGCACAGAGAAGCTATCTATGGTCGAGTGGATCAAAGGCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGTCAGCACAGAGAAGCTATCTATGGTCGAGTGGATCAAAGGCACA  350

seq1  TCACATACAGGCAGCTGAACTTGGTAATGTGTAAGAGGCACCCAGGTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATACAGGCAGCTGAACTTGGTAATGTGTAAGAGGCACCCAGGTGGA  400

seq1  ACTTGTTTTGAAGGCATAAAGGAATCAGAAGACTAGCTGAGGCTTGGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTTTGAAGGCATAAAGGAATCAGAAGACTAGCTGAGGCTTGGTGC  450

seq1  TATGTGGCAGGGATAGAGACCATAAAGAGGGCCCAGAAGAGACTGTTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGCAGGGATAGAGACCATAAAGAGGGCCCAGAAGAGACTGTTAGT  500

seq1  GAAGGTGCACCCCAGTTGCTATGAAGATCTGGGCATTTTGTAGATGCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGCACCCCAGTTGCTATGAAGATCTGGGCATTTTGTAGATGCTAG  550

seq1  CACCATGAAATGACCACCAAGGAGAGAAGCAGCTGTAGAGTGGAGCTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGAAATGACCACCAAGGAGAGAAGCAGCTGTAGAGTGGAGCTGGC  600

seq1  CTGACTCTGTGAGATAAGCTGTGTGTATTTCAGATGGTAAAGCTCCACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCTGTGAGATAAGCTGTGTGTATTTCAGATGGTAAAGCTCCACTT  650

seq1  GGAGCTGTTCAAAGGCCCTGTGGCACCCAGAAGATGGTGAGTGAATCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGTTCAAAGGCCCTGTGGCACCCAGAAGATGGTGAGTGAATCCCA  700

seq1  AACATTTGATACTGAGTTATTTATAATGATGGAATTTGGTCTTGTTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTGATACTGAGTTATTTATAATGATGGAATTTGGTCTTGTTTGTT  750

seq1  CAGATTGTGACTGTGTCCTAATTCTTCTTGCATTAAAAAAAAAACTAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTGTGACTGTGTCCTAATTCTTCTTGCATTAAAAAAAAAACTAACT  800

seq1  TTTTAAAAAATTTTACTAGAGTCCATAGTTGAGAGATTTTAGATGTATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAAATTTTACTAGAGTCCATAGTTGAGAGATTTTAGATGTATTA  850

seq1  AAGAGAGTAAAATTTTAACTACTGGGGATTTTAAACTTTGGAATATGATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGTAAAATTTTAACTACTGGGGATTTTAAACTTTGGAATATGATT  900

seq1  TATATTGTGATATTGATATGACAGTTTAAAGATAACAAGCAAGAAAAAGT  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TATATTGTGATATTGATATGACAGTTTAAAGAT-ACAAGCAAGAAAAAGT  949

seq1  TATGATCTAATAGTGATGTCTTTATGTGTCAAGAAGATAAAAGTTCAAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATCTAATAGTGATGTCTTTATGTGTCAAGAAGATAAAAGTTCAAAT  999

seq1  GTACTGGATAGTTTTATGTCAACTTGAAACAAGCTAACATCATTTCAGAA  1050
      ||||||||||| |||||||||||||||||| |||| |||||||||||| |
seq2  GTACTGGATAGGTTTATGTCAACTTGAAAC-AGCT-ACATCATTTCAG-A  1046

seq1  GAGGAAATTTCATCT-GAGAGTATGCAGCCATCATCTTAGCCTGTGGGAC  1099
      ||||||||||||||| | ||||||||||||||||||| || |||||||| 
seq2  GAGGAAATTTCATCTGGGGAGTATGCAGCCATCATCTAAG-CTGTGGGA-  1094

seq1  ATCTTATTGAATAATAATAGTTAAC-ATCATTAATGTCTTCTTCTTTGTA  1148
      |||||  || |||  |||||||||| |||||  ||| ||||||| |||||
seq2  ATCTTTATG-ATATAAATAGTTAACAATCAT--ATG-CTTCTTC-TTGTA  1139

seq1  CTATGACTTACTAAATTTA  1167
      | |||||||||||||||||
seq2  C-ATGACTTACTAAATTTA  1157