BAC Information

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BAC

Clone NameB6Ng01-094F03
Chromosome6 (Build37)4 (Build37)
Map Location 18,835,442 - 18,835,96865,804,341 - 65,805,480
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094F03.bB6Ng01-094F03.g
ACCDH905575DH905576
length9491,133
definitionDH905575|Mus musculus domesticus DNA, BAC clone: B6Ng01-094F03, 5' end.DH905576|Mus musculus domesticus DNA, BAC clone: B6Ng01-094F03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(65,804,341 - 65,805,480)
sequence
gaattctttgttcagttctgagccccattttttaagggggttatgtgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccaacaccatttgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata
cagatctttcagttccttcgttagagtcacgccgagatatttatatatt
gaattcactatgtaaactagcctggcttcacattcacagagctccacttt
cctctgccttctaatgctgggattaaaggcatgcaccaccatgtcttcct
ttttatagttttctgcctgtactggccataaactaggagcactacaggca
ttgctcttgagcagtgttgcaaaagcccttcttgtagctctacccacaaa
actagacttcttcttcgtgaatcagacatcagaacatcaggatgacttct
actcagaaatctgctccatctttttttttcctcagaaaccctgtgacatg
ctgctggtgggacataacagtttaatagttcattcctaagtagttctcct
tgcttttgacatgattttctaaatgctcttttcattttgctgtctgacat
gtcactttggaatctcaggtgaaatttccatttctttttcataaggcaac
aaagagggattactctgtgcctttgaatttctgtttcttcatttgaaaca
gtgctggtaacttttttatttatcccctacctcccccccccatctcagag
ttgttatagaaatcaactaacactaatcctgttcacacttagataatata
aagtattttatgaaatatggtggcaattcttcacacagctgtgagagtta
ctcctttctctcgaatacattttcttaccgtgggtcccatgaaatagctc
tactgtccattcttcatcaaagagacctccaggatcttctcagaagtctt
tcctttgtgaaacaatttcatgctcttcagctgaaaggtctttctttctg
ctctctctccccgcagccctctggtgtacttgttaagaaatttaattctt
gtgtttagcaaattatatcttatatcttgggtatcctagtttggggctaa
tatccacttatcagtgaatacatattgtgtgagtttctttgtgaatgtgt
tacctcactcagatgatgcccttcaggtccatccatttggctaggatttc
ataaattcattctttttaatagctgagtagtactccattgtgtaaatgta
ccatatttttctttatcattcctctgttgagggcatcttagttctttcag
cttctggcttattaaaaaagcttctatgaacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-094F03.b_47_574 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
       |||||||||||||||||||||||||||||||||||||| ||||| ||||
seq2  CAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGTTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      |||||||||||| ||| ||||||||||||||||||||||||| |||||||
seq2  GGCAAAAGACACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||| ||||||||||| |||||||| |||| ||
seq2  AAAGAACTCAAGAAGGTGGACCTCAGAAAATCACATAACCCCCTTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr4_65804341_65805480
seq2: B6Ng01-094F03.g_69_1201 (reverse)

seq1  ATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCTAG  50
      |||||||||| ||| || || |||  ||||||||||| ||||||||  ||
seq2  ATGTTCATAGAAGCTTTTTTAATA--AGCCAGAAGCT-GAAAGAACTAAG  47

seq1  ATGCCCCTCAACAGAGGAATGGATACAG-AAAATATGGTACATCTACACA  99
      ||| |||||||||||||||| |||| || |||||||||||||| ||||||
seq2  ATG-CCCTCAACAGAGGAAT-GATAAAGAAAAATATGGTACATTTACACA  95

seq1  ATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGC  149
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAA-TCCTAGC  144

seq1  CAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCAC  199
      |||||||||||||||| |||||||||| ||||||||||||||||||||||
seq2  CAAATGGATGGACCTGAAGGGCATCAT-CTGAGTGAGGTAACACATTCAC  193

seq1  AAAGAAACTCACACAATATGTATTCACTGATAAGTGGATATTAGCCCCAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACTCACACAATATGTATTCACTGATAAGTGGATATTAGCCCCAA  243

seq1  ACCTAGGATACCCAAGATATAAGATATAATTTGCTAAACACAAGAATTAA  299
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-CTAGGATACCCAAGATATAAGATATAATTTGCTAAACACAAGAATTAA  292

seq1  ATTTCTTAACAAGTACACCAGAGGGCTGCGGGGAGAGAGAGCAGAAAGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTAACAAGTACACCAGAGGGCTGCGGGGAGAGAGAGCAGAAAGAA  342

seq1  AGACCTTTCAGCTGAAGAGCATGAAATTGTTTCACAAAGGAAAGACTTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTTTCAGCTGAAGAGCATGAAATTGTTTCACAAAGGAAAGACTTCT  392

seq1  GAGAAGATCCTGGAGGTCTCTTTGATGAAGAATGGACAGTAGAGCTATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGATCCTGGAGGTCTCTTTGATGAAGAATGGACAGTAGAGCTATTT  442

seq1  CATGGGACCCACGGTAAGAAAATGTATTCGAGAGAAAGGAGTAACTCTCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGACCCACGGTAAGAAAATGTATTCGAGAGAAAGGAGTAACTCTCA  492

seq1  CAGCTGTGTGAAGAATTGCCACCATATTTCATAAAATACTTTATATTATC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTGTGAAGAATTGCCACCATATTTCATAAAATACTTTATATTATC  542

seq1  TAAGTGTGAACAGGATTAGTGTTAGTTGATTTCTATAACAACTCTGAGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTGAACAGGATTAGTGTTAGTTGATTTCTATAACAACTCTGAGAT  592

seq1  GGGGGGGGGAGGTAGGGGATAAATAAAAAAGTTACCAGCACTGTTTCAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGGAGGTAGGGGATAAATAAAAAAGTTACCAGCACTGTTTCAAA  642

seq1  TGAAGAAACAGAAATTCAAAGGCACAGAGTAATCCCTCTTTGTTGCCTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAACAGAAATTCAAAGGCACAGAGTAATCCCTCTTTGTTGCCTTA  692

seq1  TGAAAAAGAAATGGAAATTTCACCTGAGATTCCAAAGTGACATGTCAGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAGAAATGGAAATTTCACCTGAGATTCCAAAGTGACATGTCAGAC  742

seq1  AGCAAAATGAAAAGAGCATTTAGAAAATCATGTCAAAAGCAAGGAGAACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAATGAAAAGAGCATTTAGAAAATCATGTCAAAAGCAAGGAGAACT  792

seq1  ACTTAGGAATGAACTATTAAACTGTTATGTCCCACCAGCAGCATGTCACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGGAATGAACTATTAAACTGTTATGTCCCACCAGCAGCATGTCACA  842

seq1  GGGTTTCTGAGGAAAAAAAAAGATGGAGCAGATTTCTGAGTAGAAGTCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCTGAGGAAAAAAAAAGATGGAGCAGATTTCTGAGTAGAAGTCAT  892

seq1  CCTGATGTTCTGATGTCTGATTCACGAAGAAGAAGTCTAGTTTTGTGGGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGTTCTGATGTCTGATTCACGAAGAAGAAGTCTAGTTTTGTGGGT  942

seq1  AGAGCTACAAGAAGGGCTTTTGCAACACTGCTCAAGAGCAATGCCTGTAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTACAAGAAGGGCTTTTGCAACACTGCTCAAGAGCAATGCCTGTAG  992

seq1  TGCTCCTAGTTTATGGCCAGTACAGGCAGAAAACTATAAAAAGGAAGACA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTAGTTTATGGCCAGTACAGGCAGAAAACTATAAAAAGGAAGACA  1042

seq1  TGGTGGTGCATGCCTTTAATCCCAGCATTAGAAGGCAGAGGAAAGTGGAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTGCATGCCTTTAATCCCAGCATTAGAAGGCAGAGGAAAGTGGAG  1092

seq1  CTCTGTGAATGTGAAGCCAGGCTAGTTTACATAGTGAATTC  1140
      |||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGAATGTGAAGCCAGGCTAGTTTACATAGTGAATTC  1133