BAC Information

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BAC

Clone NameB6Ng01-094G02
Chromosome4 (Build37)
Map Location 12,454,921 - 12,456,099
singlet/doubletsinglet
Overlap genenone
Upstream gene1110037F02Rik, LOC100039847, E130016E03Rik, LOC100039862, Gem, Cdh17, Ppm2c, Tmem67, C430048L16Rik, LOC230010, LOC623671, LOC100039958, Rbm12b, 6720467C03Rik, LOC545592
Downstream geneOTTMUSG00000004461, LOC100039988
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094G02.bB6Ng01-094G02.g
ACCDH905621DH905622
length1,1591,143
definitionDH905621|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G02, 5' end.DH905622|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgactttgctgatgaaaaggtttggcctgaagagatggaatat
tcctgtggaactcccaaatcataaaagagagcctctaaagtcattgccac
agtaattcccagtctgggcctgctctaccctttagcagtgagaaacattg
atggcttaactagagtcagcatcttcctgaaggcccaccagcagcagtac
tgttgtatttccacttccctcactggagccccatccctgggaactgcgtt
tacaatatggaagctgtgaagacaataagtttacatggaaattaataaaa
gaaactaaggccataatcaataagtgttttcttgacgcttttattcacag
aattcaaaatgcctggatgtaaagcattactggcatcaaattccacgtat
aggaaattataatcaaatttacaaagagaggagttaaatatggccattgg
agggaagaagggaaagtaggaaggcaagaagtcagatgtgactataaaga
gatttctttgctgaaggaagattctcaaagatcttgatcaaaatgtgtca
gtcaccacatatgaaggagaggcgtataccagaaggatctatgtctgctc
tgctaagtccagacagctgaatctcacggcatgtgccaaggacagtaaaa
gtttgatgcattttgagcaaggagatggtaaaaaaatcatgaaggaatga
gtgggctgattcattaattgcagttaatggtataatgttgaactcctgag
agggtgatagaaaaaacccagaaatgttcatatttattgtgctcagttct
ttctttctcatcaagaaaaataatattcatattcaaaagtgtgtagatta
tggtttacaaacaaaaagatgaagagaatctataggtgtttttaagacta
caatcatagatatacttcttccccagtaacttgctgatggaattaccaaa
tcgcagcaatgatcgagtgagttcaaacaggaggtaaaatcgactcagac
tatttttcccccaaattcaaataaatgtgctggagacatactatctggca
gaagcacaaaagctcaaggtggctaccaaatggcagaagtgtgtgaatta
acaatgattaggaaaattcaatcattctattctgacatgtccaagtcatg
ccttaagtc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatacaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatactggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacatggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtcctcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagatttactgaaag
gaccagatgtagctgtctcttgtgagactatgccggggcctagcaaacac
agaagtggatgctcacagtcagctatggatggatcacaggctcccaatga
gagctagagaagtaccaagagctaaagggatctcaccctataggtggaac
aacatatgactacagtaccctgagctctgactctagctgcatatgtatcc
aaagatgctagtccgcatcctgaagaagtcattgaaccgcgaccttggtg
tgccgtacaggacgccaagtcaaaggggggaatgtggttgctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_12454921_12456099
seq2: B6Ng01-094G02.b_47_1205 (reverse)

seq1  GACTTTAGGCATGGACCTTTTGACATGGGTCAGGATAGGATGATTGATTT  50
      ||||| |||||| |||  || |||||  ||||| |||| |||||||| ||
seq2  GACTTAAGGCAT-GAC--TTGGACAT--GTCAGAATAGAATGATTGAATT  45

seq1  TTCCTAATCATTTGTTATGTC-CACACTTTCTGCCATTTGGTTAGCCCAC  99
      |||||||||| ||||||  || ||||| ||||||||||||| |||||   
seq2  TTCCTAATCA-TTGTTAATTCACACAC-TTCTGCCATTTGG-TAGCC--A  90

seq1  CCTTGAGCTTTTGGTGCTTCTGCCAAGATAGTATGTCTCCAAGCACATTT  149
      |||||||||||| ||||||||||| ||||||||||||||| |||||||||
seq2  CCTTGAGCTTTT-GTGCTTCTGCC-AGATAGTATGTCTCC-AGCACATTT  137

seq1  ATTTTGAAATTTGGGGGGAAAAATAGTCTGAGTCGATTTTTACCTCCTTG  199
      | ||||||  || ||||||||||||||||||||||| |||||||||||  
seq2  A-TTTGAA--TTTGGGGGAAAAATAGTCTGAGTCGA-TTTTACCTCCT--  181

seq1  TTTTGAACTTCACTCGATCATTTGCTGCGATTTGGTAATTCCATCAGCAA  249
       ||||||| ||||||||||| |||||||||||||||||||||||||||||
seq2  GTTTGAAC-TCACTCGATCA-TTGCTGCGATTTGGTAATTCCATCAGCAA  229

seq1  GTTACTGGGGAAGAAGTATATCTATGATTGTAGTCTTAAAAACACCTATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTGGGGAAGAAGTATATCTATGATTGTAGTCTTAAAAACACCTATA  279

seq1  GATTCTCTTCATCTTTTTGTTTGTAAACCATAATCTACACACTTTTGAAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTCTTCATCTTTTTGTTTGTAAACCATAATCTACACACTTTTGAAT  329

seq1  ATGAATATTATTTTTCTTGATGAGAAAGAAAGAACTGAGCACAATAAATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATTATTTTTCTTGATGAGAAAGAAAGAACTGAGCACAATAAATA  379

seq1  TGAACATTTCTGGGTTTTTTCTATCACCCTCTCAGGAGTTCAACATTATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATTTCTGGGTTTTTTCTATCACCCTCTCAGGAGTTCAACATTATA  429

seq1  CCATTAACTGCAATTAATGAATCAGCCCACTCATTCCTTCATGATTTTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAACTGCAATTAATGAATCAGCCCACTCATTCCTTCATGATTTTTT  479

seq1  TACCATCTCCTTGCTCAAAATGCATCAAACTTTTACTGTCCTTGGCACAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATCTCCTTGCTCAAAATGCATCAAACTTTTACTGTCCTTGGCACAT  529

seq1  GCCGTGAGATTCAGCTGTCTGGACTTAGCAGAGCAGACATAGATCCTTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTGAGATTCAGCTGTCTGGACTTAGCAGAGCAGACATAGATCCTTCT  579

seq1  GGTATACGCCTCTCCTTCATATGTGGTGACTGACACATTTTGATCAAGAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATACGCCTCTCCTTCATATGTGGTGACTGACACATTTTGATCAAGAT  629

seq1  CTTTGAGAATCTTCCTTCAGCAAAGAAATCTCTTTATAGTCACATCTGAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGAATCTTCCTTCAGCAAAGAAATCTCTTTATAGTCACATCTGAC  679

seq1  TTCTTGCCTTCCTACTTTCCCTTCTTCCCTCCAATGGCCATATTTAACTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCCTTCCTACTTTCCCTTCTTCCCTCCAATGGCCATATTTAACTC  729

seq1  CTCTCTTTGTAAATTTGATTATAATTTCCTATACGTGGAATTTGATGCCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTGTAAATTTGATTATAATTTCCTATACGTGGAATTTGATGCCA  779

seq1  GTAATGCTTTACATCCAGGCATTTTGAATTCTGTGAATAAAAGCGTCAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGCTTTACATCCAGGCATTTTGAATTCTGTGAATAAAAGCGTCAAG  829

seq1  AAAACACTTATTGATTATGGCCTTAGTTTCTTTTATTAATTTCCATGTAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACTTATTGATTATGGCCTTAGTTTCTTTTATTAATTTCCATGTAA  879

seq1  ACTTATTGTCTTCACAGCTTCCATATTGTAAACGCAGTTCCCAGGGATGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTGTCTTCACAGCTTCCATATTGTAAACGCAGTTCCCAGGGATGG  929

seq1  GGCTCCAGTGAGGGAAGTGGAAATACAACAGTACTGCTGCTGGTGGGCCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCAGTGAGGGAAGTGGAAATACAACAGTACTGCTGCTGGTGGGCCT  979

seq1  TCAGGAAGATGCTGACTCTAGTTAAGCCATCAATGTTTCTCACTGCTAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAGATGCTGACTCTAGTTAAGCCATCAATGTTTCTCACTGCTAAA  1029

seq1  GGGTAGAGCAGGCCCAGACTGGGAATTACTGTGGCAATGACTTTAGAGGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGAGCAGGCCCAGACTGGGAATTACTGTGGCAATGACTTTAGAGGC  1079

seq1  TCTCTTTTATGATTTGGGAGTTCCACAGGAATATTCCATCTCTTCAGGCC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTATGATTTGGGAGTTCCACAGGAATATTCCATCTCTTCAGGCC  1129

seq1  AAACCTTTTCATCAGCAAAGTCAAGAATTC  1179
      ||||||||||||||||||||||||||||||
seq2  AAACCTTTTCATCAGCAAAGTCAAGAATTC  1159