BAC Information

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BAC

Clone NameB6Ng01-094G14
Chromosome4 (Build37)
Map Location 78,247,384 - 78,357,076
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039974, LOC100039996
Downstream geneLOC100040026, LOC100040036, LOC667922
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094G14.bB6Ng01-094G14.g
ACCDH905641DH905642
length2821,083
definitionDH905641|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G14, 5' end.DH905642|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,356,795 - 78,357,076)(78,247,384 - 78,248,497)
sequence
aatggtatttttacagacattatgtctcacattgttttgtttagcttaag
tcttggtcttttgtttctatattatggtttttgatttgtgcttaatagaa
tttttgcattttttatttttcatcttcctatttatatatgtgtttgcgct
gattggagtgtgtggaaaatcttaaagaagttgaggaaaaacaaactctg
atcctctgatcagaatatactgcatgggaaaaatagtgtcaataaatgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattccaatattgaagacttcttatgaaagaagattggaagcaaaacca
agagtgaatattgctgtttattaaaataaatgctagatttaaaagaagta
atttgtggtaaaacattgtgatctttgctaaaccactaagtaatacaaat
tgtgaatgtgtccatgaacttaacaaaaaactccagattgttagcaattc
aatctctgcatgtcttttgtcagtacagaaaaaaaaaatagagaacaatt
tacattgcataaacacacacacacacgtatacacacagatgcacgtgcac
acacatataggatttataatatgctgcatatatttggaagtaatattcta
tttaagattaaaggatttctccatgctatcaagaagaaaaaaatcaagtt
tggagtagtgattaaaacaggtacaagagaaggaattgtaaagggtaaat
agtatattttacttgttgctgtttttttttttttttttttttttaataaa
agcagaattgagcctcagttcagggtattcagtgatgagtgaccattgga
agactgagtggcaggtccattgtctgagcattttcataaaataaccagaa
gatctaggtttattacagattaaacatagatgctcaagtgtgtcttatat
caactctcaataatttggcttatctctaggagtggtgaaaatgatgtatg
tataaattagtacatggactccaggtttacgttttaggtatagatcttga
cttccctgacaactactctagcttacccatgaacctctatcagtgcccca
atcacaatacttgagaatgatgatgtcaagattccctctgaggttgagac
tacaattcttattcctctcgtctttttatcagtgctttagcctcaaagat
tccttatgggtctcttgctactccagtatatacactgtaaaatggtcacc
ttataacataatatagaaaacattagaagtagttaaggattttgcaggct
ttagtgaacatactcaattatttgggatctttcagtatcagtgagatgct
attgaaaatatcttctggtcatgcagagatcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_78356795_78357076
seq2: B6Ng01-094G14.b_52_333 (reverse)

seq1  CACACACACACACACACACACACACACACACACACATTTATTGACACTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACATTTATTGACACTAT  50

seq1  TTTTCCCATGCAGTATATTCTGATCAGAGGATCAGAGTTTGTTTTTCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCATGCAGTATATTCTGATCAGAGGATCAGAGTTTGTTTTTCCTC  100

seq1  AACTTCTTTAAGATTTTCCACACACTCCAATCAGCGCAAACACATATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTTTAAGATTTTCCACACACTCCAATCAGCGCAAACACATATATA  150

seq1  AATAGGAAGATGAAAAATAAAAAATGCAAAAATTCTATTAAGCACAAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGAAGATGAAAAATAAAAAATGCAAAAATTCTATTAAGCACAAATC  200

seq1  AAAAACCATAATATAGAAACAAAAGACCAAGACTTAAGCTAAACAAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCATAATATAGAAACAAAAGACCAAGACTTAAGCTAAACAAAACA  250

seq1  ATGTGAGACATAATGTCTGTAAAAATACCATT  282
      ||||||||||||||||||||||||||||||||
seq2  ATGTGAGACATAATGTCTGTAAAAATACCATT  282

seq1: chr4_78247384_78248497
seq2: B6Ng01-094G14.g_68_1150

seq1  GAATTCCAATATTGAAGACTTCTTATGAAAGAAGATTGGAAGCAAAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATATTGAAGACTTCTTATGAAAGAAGATTGGAAGCAAAACCA  50

seq1  AGAGTGAATATTGCTGTTTATTAAAATAAATGCTAGATTTAAAAGAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAATATTGCTGTTTATTAAAATAAATGCTAGATTTAAAAGAAGTA  100

seq1  ATTTGTGGTAAAACATTGTGATCTTTGCTAAACCACTAAGTAATACAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGGTAAAACATTGTGATCTTTGCTAAACCACTAAGTAATACAAAT  150

seq1  TGTGAATGTGTCCATGAACTTAACAAAAAACTCCAGATTGTTAGCAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATGTGTCCATGAACTTAACAAAAAACTCCAGATTGTTAGCAATTC  200

seq1  AATCTCTGCATGTCTTTTGTCAGTACAGAAAAAAAAAATAGAGAACAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTGCATGTCTTTTGTCAGTACAGAAAAAAAAAATAGAGAACAATT  250

seq1  TACATTGCATAAACACACACACACACGTATACACACAGATGCACGTGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGCATAAACACACACACACACGTATACACACAGATGCACGTGCAC  300

seq1  ACACATATAGGATTTATAATATGCTGCATATATTTGGAAGTAATATTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATAGGATTTATAATATGCTGCATATATTTGGAAGTAATATTCTA  350

seq1  TTTAAGATTAAAGGATTTCTCCATGCTATCAAGAAGAAAAAAATCAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGATTAAAGGATTTCTCCATGCTATCAAGAAGAAAAAAATCAAGTT  400

seq1  TGGAGTAGTGATTAAAACAGGTACAAGAGAAGGAATTGTAAAGGGTAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTAGTGATTAAAACAGGTACAAGAGAAGGAATTGTAAAGGGTAAAT  450

seq1  AGTATATTTTACTTGTTGCTGTTTTTTTTTTTTTTTTTTTTTTTAATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATTTTACTTGTTGCTGTTTTTTTTTTTTTTTTTTTTTTTAATAAA  500

seq1  AGCAGAATTGAGCCTCAGTTCAGGGTATTCAGTGATGAGTGACCATTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAATTGAGCCTCAGTTCAGGGTATTCAGTGATGAGTGACCATTGGA  550

seq1  AGACTGAGTGGCAGGTCCATTGTCTGAGCATTTTCATAAAATAACCAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGAGTGGCAGGTCCATTGTCTGAGCATTTTCATAAAATAACCAGAA  600

seq1  GATCTAGGTTTATTACAGATTAAACATAGATGCTCAAGTGTGTCTTATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAGGTTTATTACAGATTAAACATAGATGCTCAAGTGTGTCTTATAT  650

seq1  CAACTCTCAATAATTTGGCTTATCTCTAGGAGTGGTGAAAATGATGTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTCAATAATTTGGCTTATCTCTAGGAGTGGTGAAAATGATGTATG  700

seq1  TATAAATTAGTACATGGACTCCAGGTTTACGTTTTAGGTATAGATCTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATTAGTACATGGACTCCAGGTTTACGTTTTAGGTATAGATCTTGA  750

seq1  CTTCCCTGACAACTACTCTAGCTTACCCATGAACCTCTATCAGTGCCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTTCCCTGACAACTACTCTAGCTTACCCATGAACCTCTATCAGTGCCCC-  799

seq1  AATCACAATACTTGAGAATGATGATGTCAAGATTCCCTCTGAGGTTGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAATACTTGAGAATGATGATGTCAAGATTCCCTCTGAGGTTGAGA  849

seq1  CTACAATTCTTATTCCTCTTGTCCTTTTTTATCAGTGCTTTAGCCTCAAA  900
      ||||||||||||||||||| |||  |||||||||||||||||||||||||
seq2  CTACAATTCTTATTCCTCTCGTC--TTTTTATCAGTGCTTTAGCCTCAAA  897

seq1  GATTCCTTATGGGTCTCTTTGCTACTCCAAGTAATAATAACACTGTAAAA  950
      ||||||||||||||||| |||||||||| ||| |||   |||||||||||
seq2  GATTCCTTATGGGTCTC-TTGCTACTCC-AGT-ATA--TACACTGTAAAA  942

seq1  TGGTTCACTTTATAAACAATAATATTAGAAAACATTAGAAAGTAGTTTTA  1000
      ||| |||| ||||||   |||||| ||||||||||||| ||||||||   
seq2  TGG-TCACCTTATAA--CATAATA-TAGAAAACATTAG-AAGTAGTT---  984

seq1  AAAGATTTTTGCAGGGCTTTAGTTGAACATAACTCATTTATTTGAGGAAT  1050
       |||  ||||||| |||||||| ||||||| ||||| ||||||  || ||
seq2  -AAGGATTTTGCA-GGCTTTAG-TGAACAT-ACTCAATTATTT--GGGAT  1028

seq1  CTTTTCAGTTATCAGTGTAGATGCTATTTGAAAAATTATCTTCATGTCAT  1100
      | |||||| |||||||| |||||||| |||||||  |||||||  |||||
seq2  C-TTTCAG-TATCAGTG-AGATGCTA-TTGAAAA--TATCTTCTGGTCAT  1072

seq1  GCAAGAGTGATCAT  1114
      ||   || ||||||
seq2  GC---AGAGATCAT  1083