BAC Information

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BAC

Clone NameB6Ng01-095C16
Chromosome4 (Build37)
Map Location 147,312,843 - 147,412,228
singlet/doubletdoublet
Overlap gene2510039O18Rik, Nppb, Nppa, Clcn6
Upstream geneLOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1
Downstream geneMthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572, LOC100041733, LOC100041742, LOC100041755, Casz1, Pex14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095C16.bB6Ng01-095C16.g
ACCDH906181DH906182
length1,0801,101
definitionDH906181|Mus musculus domesticus DNA, BAC clone: B6Ng01-095C16, 5' end.DH906182|Mus musculus domesticus DNA, BAC clone: B6Ng01-095C16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(147,411,149 - 147,412,228)(147,312,843 - 147,313,948)
sequence
ccgatcaatagaaatgtagagctcatggttttgaaacattgttcctcttt
gaagatggctctagctaatttcgattttaataatactaccctccttgtac
ccttaacccattaaaagatctccattctgtgaatctgtttttctagacca
tccttggggagacacaggaagaagaggatgagattcttccaaggaaagac
tatgaggtgaggtgttccagatgctgtcctgggtaactggtgtagtgaga
ggactgagtgcttcaggcctccaaccagagatgctctttgaccctctgcc
tcagggaatgggggagatgactgcctagcaagtccttaacctggtcccac
agtctggtggtgatgcattccagttctgcctggatatagagcgtgtttgc
cattaaaccttccagggacccagggtcgaagctcttccctgtgagtgctc
aaaacagtctctctcgtgagctgtgaggagaccttgcctctctctcttct
gccctattctggattatagtttccagtttcagatatgaaactttgaagag
tgtggggccacatgttgtggttccttttagtttgccactggacttgggag
gctgagatgggaagagctcttctggagactcacaaaggctgctccatcaa
tcctatcccaacctcttattttttgaaaaagatttatttatttaattaat
gtatatgagtatactgtagctgtcttcggacacggattcctattacagat
gggtcataagccaccatgtggttgctgggagttgaactcaggacctctgc
aagagcagtcagtgctcttaactgctgagccatctctccagcctccctat
ccacatttttgtttccctatccaaccttttgagtaactctgtcacaccca
ttttgtagctcgcttgccttaggctgatagaatgttcatgtgaaattttt
ttttttttttagaatttatttattttattataatgtaagaacactgtagc
tgtctcagaacctcagaaaagggcatcagaattcgtaagatggttgggag
caaccatgtggtgcttgggatggaactagg
gaattcactcttgtgaagcctggccttactcttttggaacctgtttcctg
tttgtttcatcaaattgctagaacttgagcccaatccaagcttcgtgtag
ggtggcctgtttctttaagcaagaggtggtggctgctgcccagatgttgc
ctctagtatttctagtacgtgctccacgtgcaatggactgttaaaggcac
aggactccaatttaataggaaactgctggacaacttcaggatgggaagtt
gtccacacacaaacatgcatgcggtttcctcctgtcatccattaaaaagt
ggagctggagagatggttcagcagttaagagactggcaactcacacgtgc
ctgtaactccagggatcccataccatcttctgatttggacatacaacaat
gtgcacatagaggcgtcagctctctccttctaccacataggtcctaggta
cagaacttaggtcatcacacttgctggcgaatgcttttacctgctgagcc
atcttgccattagatttttattttaactttaaggttctgggaaatcacta
gtgctagaggaatattctgttctgagctaatagtctgctaaaaaaaaaag
tgtggttgttttagtttgttttgaaatatggtctcactgtgtagacaggc
tagccttgaacttagtaaaatctacctgcccctgcctcttgaagagtcag
attaaagatatgtgtacaacaactggctaaaatgtgctactgagctctgg
ggtgtttgtttgcttgcttgcttgctttagtttttctttttctttctttt
tttttacactgtagctgtctcagacattccaggaaacggcatcagatttc
attacggatcccaccatgtggttgctgggattttgaactcaggacctttg
gaagagcagtcgggtgctcttaacgctgagccatcttaccagcccacttt
attttttcaagacagggtttcttctgtgtagtctggctgtcctggacctc
tgagaacaggcttgtttcaactcgaggatactggccctgctctttaaatg
ctagactacagcatggtgccaccactggctggcttttagcattcattttt
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147411149_147412228
seq2: B6Ng01-095C16.b_49_1128 (reverse)

seq1  CCTAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACG  50
      ||||||||  ||||||   |||||||||| |||| ||||||||  | |||
seq2  CCTAGTTC-CATCCCAAGCACCACATGGTTGCTCCCAACCATC--TTACG  47

seq1  AAATCTGATGCCCTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTA  100
      || ||||||||||| |||| |||  |||| ||||||||||||||| ||||
seq2  AATTCTGATGCCCTTTTCT-GAGGTTCTG-AGACAGCTACAGTGTTCTTA  95

seq1  CA-TATAAT-AAATAAATAAA-TCTAAAAAAAAAAAAAAA-TTCACATGA  146
      || |||||| ||||||||||| |||||||||||||||||| |||||||||
seq2  CATTATAATAAAATAAATAAATTCTAAAAAAAAAAAAAAATTTCACATGA  145

seq1  ACATTCTATCAGCCTAAGGCAAGCGAGCTAC-AAATGGGTGTGACAGAGT  195
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACATTCTATCAGCCTAAGGCAAGCGAGCTACAAAATGGGTGTGACAGAGT  195

seq1  TACTCAAAAGGTTGGATAGGGAAACAAAAATGTTGGATAGGGAGGCTGGA  245
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TACTCAAAAGGTTGGATAGGGAAACAAAAATG-TGGATAGGGAGGCTGGA  244

seq1  GAGATGGCTCAGCAGTTAAGAGCACTGACTGCTCTTGCAGAGGTCCTGAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGCTCAGCAGTTAAGAGCACTGACTGCTCTTGCAGAGGTCCTGAG  294

seq1  TTCAACTCCCAGCAACCACATGGTGGCTTATGA-CCATCTGTAATAGGAA  344
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTCAACTCCCAGCAACCACATGGTGGCTTATGACCCATCTGTAATAGGAA  344

seq1  TCCGTGTCCGAAGACAGCTACAGTATACTCATATACATTAATTAAATAAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTGTCCGAAGACAGCTACAGTATACTCATATACATTAATTAAATAAA  394

seq1  TAAATCTTTTTCAAAAAATAAGAGGTTGGGATAGGATTGATGGAGCAGCC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTTTTTCAAAAAATAAGAGGTTGGGATAGGATTGATGGAGCAGCC  444

seq1  TTTGTGAGTCTCCAGAAGAGCTCTTCCCATCTCAGCCTCCCAAGTCCAGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGAGTCTCCAGAAGAGCTCTTCCCATCTCAGCCTCCCAAGTCCAGT  494

seq1  GGCAAACTAAAAGGAACCACAACATGTGGCCCCACACTCTTCAAAGTTTC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAACTAAAAGGAACCACAACATGTGGCCCCACACTCTTCAAAGTTTC  544

seq1  ATATCTGAAACTGGAAACTATAATCCAGAATAGGGCAGAAGAGAGAGAGG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGAAACTGGAAACTATAATCCAGAATAGGGCAGAAGAGAGAGAGG  594

seq1  CAAGGTCTCCTCACAGCTCACGAGAGAGACTGTTTTGAGCACTCACAGGG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTCTCCTCACAGCTCACGAGAGAGACTGTTTTGAGCACTCACAGGG  644

seq1  AAGAGCTTCGACCCTGGGTCCCTGGAAGGTTTAATGGCAAACACGCTCTA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTTCGACCCTGGGTCCCTGGAAGGTTTAATGGCAAACACGCTCTA  694

seq1  TATCCAGGCAGAACTGGAATGCATCACCACCAGACTGTGGGACCAGGTTA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGGCAGAACTGGAATGCATCACCACCAGACTGTGGGACCAGGTTA  744

seq1  AGGACTTGCTAGGCAGTCATCTCCCCCATTCCCTGAGGCAGAGGGTCAAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTGCTAGGCAGTCATCTCCCCCATTCCCTGAGGCAGAGGGTCAAA  794

seq1  GAGCATCTCTGGTTGGAGGCCTGAAGCACTCAGTCCTCTCACTACACCAG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCTCTGGTTGGAGGCCTGAAGCACTCAGTCCTCTCACTACACCAG  844

seq1  TTACCCAGGACAGCATCTGGAACACCTCACCTCATAGTCTTTCCTTGGAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCAGGACAGCATCTGGAACACCTCACCTCATAGTCTTTCCTTGGAA  894

seq1  GAATCTCATCCTCTTCTTCCTGTGTCTCCCCAAGGATGGTCTAGAAAAAC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTCATCCTCTTCTTCCTGTGTCTCCCCAAGGATGGTCTAGAAAAAC  944

seq1  AGATTCACAGAATGGAGATCTTTTAATGGGTTAAGGGTACAAGGAGGGTA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCACAGAATGGAGATCTTTTAATGGGTTAAGGGTACAAGGAGGGTA  994

seq1  GTATTATTAAAATCGAAATTAGCTAGAGCCATCTTCAAAGAGGAACAATG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTATTAAAATCGAAATTAGCTAGAGCCATCTTCAAAGAGGAACAATG  1044

seq1  TTTCAAAACCATGAGCTCTACATTTCTATTGATCGG  1080
      ||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAACCATGAGCTCTACATTTCTATTGATCGG  1080

seq1: chr4_147312843_147313948
seq2: B6Ng01-095C16.g_68_1168

seq1  GAATTCACTCTTGTGAAGCCTGGCCTTACTCTTTTGGAACCTGTTTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTTGTGAAGCCTGGCCTTACTCTTTTGGAACCTGTTTCCTG  50

seq1  TTTGTTTCATCAAATTGCTAGAACTTGAGCCCAATCCAAGCTTCGTGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTCATCAAATTGCTAGAACTTGAGCCCAATCCAAGCTTCGTGTAG  100

seq1  GGTGGCCTGTTTCTTTAAGCAAGAGGTGGTGGCTGCTGCCCAGATGTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCCTGTTTCTTTAAGCAAGAGGTGGTGGCTGCTGCCCAGATGTTGC  150

seq1  CTCTAGTATTTCTAGTACGTGCTCCACGTGCAATGGACTGTTAAAGGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGTATTTCTAGTACGTGCTCCACGTGCAATGGACTGTTAAAGGCAC  200

seq1  AGGACTCCAATTTAATAGGAAACTGCTGGACAACTTCAGGATGGGAAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTCCAATTTAATAGGAAACTGCTGGACAACTTCAGGATGGGAAGTT  250

seq1  GTCCACACACAAACATGCATGCGGTTTCCTCCTGTCATCCATTAAAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACACACAAACATGCATGCGGTTTCCTCCTGTCATCCATTAAAAAGT  300

seq1  GGAGCTGGAGAGATGGTTCAGCAGTTAAGAGACTGGCAACTCACACGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGGAGAGATGGTTCAGCAGTTAAGAGACTGGCAACTCACACGTGC  350

seq1  CTGTAACTCCAGGGATCCCATACCATCTTCTGATTTGGACATACAACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACTCCAGGGATCCCATACCATCTTCTGATTTGGACATACAACAAT  400

seq1  GTGCACATAGAGGCGTCAGCTCTCTCCTTCTACCACATAGGTCCTAGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACATAGAGGCGTCAGCTCTCTCCTTCTACCACATAGGTCCTAGGTA  450

seq1  CAGAACTTAGGTCATCACACTTGCTGGCGAATGCTTTTACCTGCTGAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACTTAGGTCATCACACTTGCTGGCGAATGCTTTTACCTGCTGAGCC  500

seq1  ATCTTGCCATTAGATTTTTATTTTAACTTTAAGGTTCTGGGAAATCACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGCCATTAGATTTTTATTTTAACTTTAAGGTTCTGGGAAATCACTA  550

seq1  GTGCTAGAGGAATATTCTGTTCTGAGCTAATAGTCTGCTAAAAAAAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAGAGGAATATTCTGTTCTGAGCTAATAGTCTGCTAAAAAAAAAAG  600

seq1  TGTGGTTGTTTTAGTTTGTTTTGAAATATGGTCTCACTGTGTAGACAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTGTTTTAGTTTGTTTTGAAATATGGTCTCACTGTGTAGACAGGC  650

seq1  TAGCCTTGAACTTAGTAAAATCTACCTGCCCCTGCCTCTTGAAGAGTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTGAACTTAGTAAAATCTACCTGCCCCTGCCTCTTGAAGAGTCAG  700

seq1  ATTAAAGATATGTGTACAACAACTGGCTAAAATGTGCTACTGAGCTCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGATATGTGTACAACAACTGGCTAAAATGTGCTACTGAGCTCTGG  750

seq1  GGTGTTTGTTTGCTTGCTTGCTTGCTTTAGTTTTTCTTTTTCTTTCTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTGTTTGCTTGCTTGCTTGCTTTAGTTTTTCTTTTTCTTTCTTTT  800

seq1  TTTTTACACTGTAGCTGTCTTCAGACATTCCAGGAAACGGCATCAGATTT  850
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTTTTACACTGTAGCTGTC-TCAGACATTCCAGGAAACGGCATCAGATTT  849

seq1  CATTACGGATCCCACCATGTGGTTGCTGGGA-TTTGAACTCAGGACCTTT  899
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CATTACGGATCCCACCATGTGGTTGCTGGGATTTTGAACTCAGGACCTTT  899

seq1  GGAAGAGCAGTC-GGTGCTCTTAACCGCTGAGCCATCTCACCAGCCCACT  948
      |||||||||||| ||||||||||| ||||||||||||| |||||||||||
seq2  GGAAGAGCAGTCGGGTGCTCTTAA-CGCTGAGCCATCTTACCAGCCCACT  948

seq1  TTAGTTTTTCAAGACAGGGTTTC-TCTGTGTAGTCCTGGCTGTCCTGGAA  997
      ||| ||||||||||||||||||| |||||||||| |||||||||||||| 
seq2  TTATTTTTTCAAGACAGGGTTTCTTCTGTGTAGT-CTGGCTGTCCTGGAC  997

seq1  CTCTGTAGACCAGGCTGGTCTCCAACTCCGAGAATTACCTGCCCTGCCTC  1047
      ||||| ||| |||||| || | ||||| |||| | |||  |||||||   
seq2  CTCTG-AGAACAGGCTTGT-TTCAACT-CGAGGA-TACTGGCCCTGCTCT  1043

seq1  TTAAATGCTAAGACTAACAGCAT-GTGCCACCACTGCTGGGCTCTTAGCA  1096
      ||||||||| ||||| ||||||| ||||||||||||   |||| ||||||
seq2  TTAAATGCT-AGACT-ACAGCATGGTGCCACCACTGGCTGGCTTTTAGCA  1091

seq1  TTCATTTTTG  1106
      ||||||||||
seq2  TTCATTTTTG  1101