BAC Information

Click to search

BAC

Clone NameB6Ng01-096B12
Chromosome4 (Build37)
Map Location 54,439,686 - 54,557,814
singlet/doubletdoublet
Overlap genenone
Upstream geneSlc44a1, Fsd1l, LOC666483, Fcmd, Tal2, LOC435784, Tmem38b, LOC670124, LOC100041280
Downstream geneLOC666901, LOC100041303, LOC384018, EG666920, Zfp462, LOC670211, Rad23b, LOC666953, LOC100041348, Klf4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096B12.bB6Ng01-096B12.g
ACCDH906850DH906851
length948548
definitionDH906850|Mus musculus domesticus DNA, BAC clone: B6Ng01-096B12, 5' end.DH906851|Mus musculus domesticus DNA, BAC clone: B6Ng01-096B12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(54,557,046 - 54,557,814)(54,439,686 - 54,440,233)
sequence
gaattctttatgtgttctgagtactagtcctctgatggatgtgcactttg
caaacattttccctcagtctgaagctttttttttttttaaattcactttg
acaagatggttttcagaacagagcaaaactgtaattgtgatgactctgaa
aatctactcttcattttgtagatgatattttgatgtcagagacctctttg
cctccaaatactttatctacaaaattttataattttattttaatgcaaac
tcttccctttattaagttttagttaattttgtccaatataatatataagc
aaagggtccttttaattaattattttttacattaagatgtaaattatttt
attattttagttaaaaaaaaacagttgctagggaaatggctcagtagtaa
agttcttgttacacaaattaagaacttgagatcagaactccagacctcat
gtaaacaaatgtgtgaagagtgcatgcctataaccctagcactgggaaaa
cagaaacatcctatggacagctggccagacaggttggcttacttggtaag
ctccacattcagtgagagactctgccttaaatgctaagaatgagatggaa
gaagacacctagttttgacttctggcttccacctgcttgcatatatgaac
atgtatataagcatacacatacactgtatatgtacatagatatatgcata
ctgacacataagcacacacatacacttattctttttacatttactggctt
taatatgttttttttggggggggaggtgtatctgttttctgatttctttg
tcatttcatttgacctgtctttcatccttcctcaactgccacccagtgtg
ataagcatagatttgaagtaaatcctgaaatcaggtagacagtttcagat
gggtttcccctcttttattttacctctgaaactgttctagctcctttg
gaattccactcaaactgggtgaagacatgatgatattcaagaactgtcag
actggcagtgccaactatgagggaacaatccaaggagtccaactccagaa
aaaaaaataaatcatcagcttccaggtgtctactgctcgtgaagccagaa
tgtgagagttgggattgtcttgctatagactgtatcacactgggaaacac
agaaaggtgtgttggtgctagtttgggcttcaggtttgagaggctgtgct
accttgagaaggtcaaagatcacatttttcatatgaaatttatacagcac
aattctctctctactataagatcaccctgtatatatattttttaaaaatg
caagtgatgagctcaatagagcacatgacccaaagcatgcttccagcata
caagtttataaagttctttgtgctcttggggaaagcatacaacttctctg
aggacttataaccctctagtgtgaaaggaagattactagacctatctctc
tctctctctctctctctctctctctctctctctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_54557046_54557814
seq2: B6Ng01-096B12.b_48_816 (reverse)

seq1  CCCCAAAAAAAACATATTAAAGCCAGTAAATGTAAAAAGAATAAGTGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAAAAAAACATATTAAAGCCAGTAAATGTAAAAAGAATAAGTGTAT  50

seq1  GTGTGTGCTTATGTGTCAGTATGCATATATCTATGTACATATACAGTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGCTTATGTGTCAGTATGCATATATCTATGTACATATACAGTGTA  100

seq1  TGTGTATGCTTATATACATGTTCATATATGCAAGCAGGTGGAAGCCAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGCTTATATACATGTTCATATATGCAAGCAGGTGGAAGCCAGAA  150

seq1  GTCAAAACTAGGTGTCTTCTTCCATCTCATTCTTAGCATTTAAGGCAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAACTAGGTGTCTTCTTCCATCTCATTCTTAGCATTTAAGGCAGAG  200

seq1  TCTCTCACTGAATGTGGAGCTTACCAAGTAAGCCAACCTGTCTGGCCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCACTGAATGTGGAGCTTACCAAGTAAGCCAACCTGTCTGGCCAGC  250

seq1  TGTCCATAGGATGTTTCTGTTTTCCCAGTGCTAGGGTTATAGGCATGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATAGGATGTTTCTGTTTTCCCAGTGCTAGGGTTATAGGCATGCAC  300

seq1  TCTTCACACATTTGTTTACATGAGGTCTGGAGTTCTGATCTCAAGTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACACATTTGTTTACATGAGGTCTGGAGTTCTGATCTCAAGTTCTT  350

seq1  AATTTGTGTAACAAGAACTTTACTACTGAGCCATTTCCCTAGCAACTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTGTAACAAGAACTTTACTACTGAGCCATTTCCCTAGCAACTGTT  400

seq1  TTTTTTTAACTAAAATAATAAAATAATTTACATCTTAATGTAAAAAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAACTAAAATAATAAAATAATTTACATCTTAATGTAAAAAATAA  450

seq1  TTAATTAAAAGGACCCTTTGCTTATATATTATATTGGACAAAATTAACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAAAAGGACCCTTTGCTTATATATTATATTGGACAAAATTAACTA  500

seq1  AAACTTAATAAAGGGAAGAGTTTGCATTAAAATAAAATTATAAAATTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAATAAAGGGAAGAGTTTGCATTAAAATAAAATTATAAAATTTTG  550

seq1  TAGATAAAGTATTTGGAGGCAAAGAGGTCTCTGACATCAAAATATCATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAAAGTATTTGGAGGCAAAGAGGTCTCTGACATCAAAATATCATCT  600

seq1  ACAAAATGAAGAGTAGATTTTCAGAGTCATCACAATTACAGTTTTGCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATGAAGAGTAGATTTTCAGAGTCATCACAATTACAGTTTTGCTCT  650

seq1  GTTCTGAAAACCATCTTGTCAAAGTGAATTTAAAAAAAAAAAAAGCTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAAAACCATCTTGTCAAAGTGAATTTAAAAAAAAAAAAAGCTTCA  700

seq1  GACTGAGGGAAAATGTTTGCAAAGTGCACATCCATCAGAGGACTAGTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGGGAAAATGTTTGCAAAGTGCACATCCATCAGAGGACTAGTACT  750

seq1  CAGAACACATAAAGAATTC  769
      |||||||||||||||||||
seq2  CAGAACACATAAAGAATTC  769

seq1: chr4_54439686_54440233
seq2: B6Ng01-096B12.g_69_616

seq1  GAATTCCACTCAAACTGGGTGAAGACATGATGATATTCAAGAACTGTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTCAAACTGGGTGAAGACATGATGATATTCAAGAACTGTCAG  50

seq1  ACTGGCAGTGCCAACTATGAGGGAACAATCCAAGGAGTCCAACTCCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCAGTGCCAACTATGAGGGAACAATCCAAGGAGTCCAACTCCAGAA  100

seq1  AAAAAAATAAATCATCAGCTTCCAGGTGTCTACTGCTCGTGAAGCCAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATAAATCATCAGCTTCCAGGTGTCTACTGCTCGTGAAGCCAGAA  150

seq1  TGTGAGAGTTGGGATTGTCTTGCTATAGACTGTATCACACTGGGAAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGAGTTGGGATTGTCTTGCTATAGACTGTATCACACTGGGAAACAC  200

seq1  AGAAAGGTGTGTTGGTGCTAGTTTGGGCTTCAGGTTTGAGAGGCTGTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGTGTGTTGGTGCTAGTTTGGGCTTCAGGTTTGAGAGGCTGTGCT  250

seq1  ACCTTGAGAAGGTCAAAGATCACATTTTTCATATGAAATTTATACAGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGAGAAGGTCAAAGATCACATTTTTCATATGAAATTTATACAGCAC  300

seq1  AATTCTCTCTCTACTATAAGATCACCCTGTATATATATTTTTTAAAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCTCTCTACTATAAGATCACCCTGTATATATATTTTTTAAAAATG  350

seq1  CAAGTGATGAGCTCAATAGAGCACATGACCCAAAGCATGCTTCCAGCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGATGAGCTCAATAGAGCACATGACCCAAAGCATGCTTCCAGCATA  400

seq1  CAAGTTTATAAAGTTCTTTGTGCTCTTGGGGAAAGCATACAACTTCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTATAAAGTTCTTTGTGCTCTTGGGGAAAGCATACAACTTCTCTG  450

seq1  AGGACTTATAACCCTCTAGTGTGAAAGGAAGATTACTAGACCTATCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTATAACCCTCTAGTGTGAAAGGAAGATTACTAGACCTATCTCTC  500

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  548